Aniseed - Transcript Card

Transcript 'Cisavi.CG.ENS81.R234...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R234.154619-164590.03117.t

Possible name(s)

MIDN

Gene model

Cisavi.CG.ENS81.R234.154619-164590

Location

R234 [154,618 / 164,590]

Sequences

Amino acid sequence

Length: 409

>Cisavi.CG.ENS81.R234.154619-164590.03117.p
KEEGPLEPELTMLEGHKTITLSVCPTTGGNFELEIGSDDSIEGLRRKIARHLQTPRERLT
ILFKEKVLSNGTLLDHRIQDGNKITLLPTVESGFSSTVQGTQQSIIQAIESLSDVQIDDF
LSGRSPLTLALRVGDHMMFVQLQLEQSMRSSRHHRHRPPQTPGFPRPYSPDPTTSLNCLP
PRYAIYIAEPGYKVFVVSAPTLSPTAVVRRQSFVDIESNASPTTYRISGFNILCYVINPI
VSAQNYGKERPRSSASSPTVAPPAGACIDSFTTHGPGIFSGTFSGSLHPNIQDTDGRPKR
DPQTILQILTDLLSATNHYQVRRNRDSNLFRRLCANCWHASHHNVPPPLTPTRTPSRTTH
DVISRPAVNRLKQLLQENNTTRSKLQQLTHMMKQRKLRRKMRREACGPY

Nucleotide sequence

Length: 1,227

>Cisavi.CG.ENS81.R234.154619-164590.03117.t
AAAGAGGAAGGACCATTGGAACCGGAGTTAACCATGCTTGAAGGTCACAAAACCATCACG
TTGTCAGTATGTCCCACTACTGGGGGCAACTTTGAATTAGAAATCGGCTCTGATGATTCA
ATTGAAGGCTTGCGAAGGAAAATAGCTCGTCACCTACAAACTCCAAGGGAAAGATTGACC
ATTTTGTTTAAGGAAAAGGTATTATCCAATGGTACGTTGCTGGACCATCGAATTCAAGAT
GGTAACAAGATCACATTGTTGCCAACGGTTGAAAGTGGATTTTCGTCGACGGTACAGGGC
ACCCAACAATCCATTATACAAGCTATAGAAAGCCTCTCCGACGTGCAAATCGATGATTTT
CTCTCCGGTCGTTCACCTTTGACCCTCGCGTTACGGGTGGGTGATCACATGATGTTCGTC
CAACTGCAGCTCGAGCAATCCATGCGGTCATCCCGCCACCACCGCCACCGGCCCCCACAA
ACACCAGGATTTCCACGTCCTTATTCGCCGGATCCAACCACGAGTCTCAACTGCCTTCCG
CCCAGGTATGCCATATATATAGCCGAGCCAGGATACAAAGTATTTGTTGTTTCTGCGCCC
ACCCTTTCTCCAACCGCTGTGGTAAGGCGTCAGAGCTTCGTTGATATCGAATCAAATGCT
TCACCAACAACATACCGCATCTCTGGCTTTAACATCCTTTGTTATGTCATAAACCCAATT
GTTTCCGCACAGAACTATGGGAAAGAACGGCCACGATCCAGTGCTAGCTCCCCAACTGTG
GCGCCACCTGCCGGCGCATGTATTGACTCCTTCACGACCCATGGACCTGGGATTTTCTCG
GGGACTTTCTCAGGCTCCCTGCACCCGAACATACAAGACACCGATGGAAGGCCGAAACGA
GACCCGCAGACAATTCTTCAGATTCTCACCGATCTACTGAGCGCAACCAACCATTACCAG
GTGAGGAGAAACCGCGATTCCAACCTTTTTCGTCGACTCTGCGCGAATTGCTGGCATGCC
TCGCATCATAATGTCCCCCCCCCCCTCACACCCACTCGTACTCCATCTCGAACAACGCAT
GACGTCATTTCCCGCCCCGCAGTGAACCGCTTGAAGCAGCTGCTGCAGGAGAACAACACG
ACTCGCTCGAAGCTCCAGCAGCTCACCCACATGATGAAGCAGCGGAAACTCCGGCGGAAG
ATGCGACGTGAGGCGTGTGGTCCGTAC

InterProScan

SUPERFAMILY	Ubiquitin-like_domsf (IPR029071) - T[16-100] 5.76E-13
Pfam	Ubiquitin_dom (IPR000626) - T[19-86] 5.8E-8
ProSiteProfiles	Ubiquitin_dom (IPR000626) - T[19-93] 11.573
SMART	Ubiquitin_dom (IPR000626) - T[19-89] 1.1E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MIDN_HUMAN	50 %	147	9.05E-40