Aniseed - Transcript Card

Transcript 'Cisavi.CG.ENS81.R234...' >
Transcript 'Cisavi.CG.ENS81.R234...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R234.154619-164590.03121.t

Possible name(s)

MIDN

Gene model

Cisavi.CG.ENS81.R234.154619-164590

Location

R234 [154,618 / 164,536]

Sequences

Amino acid sequence

Length: 376

>Cisavi.CG.ENS81.R234.154619-164590.03121.p
ITLSVCPTTGGNFELEIGSDDSIEGLRRKIARHLQTPRERLTILFKEKVLSNGTLLDHRI
QDGNKITLLPTVESGFSSTVQGTQQSIIQAIESLSDVQIDDFLSGRSPLTLALRVGDHMM
FVQLQLEQSMVQGGTPPSPHPTSSAGLLYKTTSRASLKRASVASLPHMPHDKPSHLDKLV
TACSSLGPSTSLSGSSPKSSSAKVKSDSKPQSSRRAAPGNPHASSPTVAPPAGACIDSFT
THGPGIFSGTFSGSLHPNIQDTDGRPKRDPQTILQILTDLLSATNHYQQSIPTPPTLPPA
IHATSVPQHPLLPPPLTPTRTPSRTTHDVISRPAVNRLKQLLQENNTTRSKLQQLTHMMK
QRKLRRKMRREACGPY

Nucleotide sequence

Length: 1,128

>Cisavi.CG.ENS81.R234.154619-164590.03121.t
ATCACGTTGTCAGTATGTCCCACTACTGGGGGCAACTTTGAATTAGAAATCGGCTCTGAT
GATTCAATTGAAGGCTTGCGAAGGAAAATAGCTCGTCACCTACAAACTCCAAGGGAAAGA
TTGACCATTTTGTTTAAGGAAAAGGTATTATCCAATGGTACGTTGCTGGACCATCGAATT
CAAGATGGTAACAAGATCACATTGTTGCCAACGGTTGAAAGTGGATTTTCGTCGACGGTA
CAGGGCACCCAACAATCCATTATACAAGCTATAGAAAGCCTCTCCGACGTGCAAATCGAT
GATTTTCTCTCCGGTCGTTCACCTTTGACCCTCGCGTTACGGGTGGGTGATCACATGATG
TTCGTCCAACTGCAGCTCGAGCAATCCATGGTGCAAGGGGGAACCCCCCCGTCGCCCCAC
CCCACTTCATCAGCTGGGCTGCTGTACAAGACGACGTCACGAGCGTCATTGAAACGAGCC
TCAGTCGCCTCCCTTCCACACATGCCACATGACAAGCCATCTCACCTTGACAAACTGGTC
ACCGCTTGCTCGTCGCTCGGCCCTTCTACGTCACTCAGCGGGAGTTCCCCAAAATCGAGT
TCAGCAAAGGTCAAGTCGGACTCCAAGCCCCAATCGTCGCGCCGTGCCGCACCGGGGAAT
CCCCATGCTAGCTCCCCAACTGTGGCGCCACCTGCCGGCGCATGTATTGACTCCTTCACG
ACCCATGGACCTGGGATTTTCTCGGGGACTTTCTCAGGCTCCCTGCACCCGAACATACAA
GACACCGATGGAAGGCCGAAACGAGACCCGCAGACAATTCTTCAGATTCTCACCGATCTA
CTGAGCGCAACCAACCATTACCAGCAGTCGATCCCGACACCCCCAACCCTTCCCCCAGCC
ATTCATGCCACATCAGTTCCCCAACACCCCTTACTCCCCCCCCCCCTCACACCCACTCGT
ACTCCATCTCGAACAACGCATGACGTCATTTCCCGCCCCGCAGTGAACCGCTTGAAGCAG
CTGCTGCAGGAGAACAACACGACTCGCTCGAAGCTCCAGCAGCTCACCCACATGATGAAG
CAGCGGAAACTCCGGCGGAAGATGCGACGTGAGGCGTGTGGTCCGTAC

InterProScan

Pfam	Ubiquitin_dom (IPR000626) - T[1-68] 5.1E-8
SMART	Ubiquitin_dom (IPR000626) - T[1-71] 1.1E-5
ProSiteProfiles	Ubiquitin_dom (IPR000626) - T[1-75] 11.573
SUPERFAMILY	Ubiquitin-like_domsf (IPR029071) - T[1-82] 4.6E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MIDN_HUMAN	52.381 %	145	1.83E-39