Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R238.1068564-1070060.05368.t

Possible name(s)

EMC2; TTC7A; TTC7B

Gene model

Cisavi.CG.ENS81.R238.1068564-1070060

Location

R238 [1,068,600 / 1,070,060]

Sequences

Amino acid sequence

Length: 272

>Cisavi.CG.ENS81.R238.1068564-1070060.05368.p
NTMEMGWAEARDTLREWREISVRDSEQIAELGEFLVFDHSSKLKDELWLVCEQVYIAALD
IGNYDLANVCIEKLNDQFPNSFRVRKPCQFEEALDAYKELESEDPTNAAIRKRKIVVLKS
KGFYGDAIKCLVSYLQTFMADNDAWLELAELYIKHLDYEKAAFCMEELLISNPFNHLYHQ
RYAEIKYSQGHRDVARQYFAQSVKLSSNTNMRALYGLFLADGDERKKDNQYAAWTAKIIS
TKYRDVWSNRSEESGNSLKITPAADIPQLTAS

Nucleotide sequence

Length: 908

>Cisavi.CG.ENS81.R238.1068564-1070060.05368.t
AATACAATGGAAATGGGGTGGGCTGAGGCACGGGATACTTTGAGGGAATGGAGGGAAATA
TCGGTGCGTGACAGCGAACAAATTGCTGAGCTCGGCGAATTTTTGGTCTTTGACCATTCG
TCGAAATTGAAGGACGAATTATGGTTGGTGTGCGAGCAAGTCTACATTGCGGCTCTCGAC
ATTGGGAATTATGATCTCGCAAACGTCTGTATCGAGAAGTTAAACGATCAATTTCCAAAC
AGTTTCAGAGTCAGGAAGCCGTGTCAATTCGAAGAAGCCTTGGATGCGTACAAGGAACTG
GAAAGTGAGGACCCAACGAATGCAGCGATTCGGAAACGAAAGATTGTGGTTCTGAAATCG
AAAGGTTTTTACGGCGACGCCATAAAATGTCTCGTTTCGTACCTTCAAACTTTCATGGCG
GACAACGACGCATGGTTGGAGCTCGCCGAGCTGTATATCAAACATCTTGATTATGAGAAA
GCGGCGTTTTGCATGGAGGAACTGCTGATTTCAAACCCGTTCAACCATCTTTACCACCAG
CGATACGCGGAGATAAAATACAGTCAGGGCCATCGTGATGTCGCGCGGCAATACTTTGCA
CAATCTGTCAAACTAAGCAGTAATACCAACATGAGGGCTTTGTATGGGCTGTTCCTCGCA
GATGGGGATGAGAGGAAAAAGGACAATCAATATGCTGCATGGACCGCTAAGATAATATCG
ACAAAATATAGAGATGTCTGGTCGAATCGAAGTGAAGAAAGCGGGAATTCGTTAAAAATT
ACTCCGGCGGCTGATATTCCACAGCTGACTGCAAGCGTGACGAATCTATTAGGACAACTT
AAGATCCAAGATTCCAGCGCATAATTTCGCACAAAAGTACAAATTATATTGTGTTCGATT
TGTATAGT

InterProScan

Gene3D	TPR-like_helical_dom_sf (IPR011990) - T[6-236] 2.5E-16
SUPERFAMILY	TPR-like_helical_dom_sf (IPR011990) - T[89-217] 8.13E-15
ProSiteProfiles	TPR-contain_dom (IPR013026) - T[89-209] 12.326
ProSiteProfiles	TPR_repeat (IPR019734) - T[142-175] 8.201 - T[176-209] 5.251

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
EMC2_HUMAN	44.863 %	235	4.49E-77