- Transcript 'Cisavi.CG.ENS81.R24....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R24.410826-416079.10470.t
Possible name(s)
NKX2-3; NKX2-5; NKX2-6
Gene model
Location
R24 [410,825 / 416,079]
Amino acid sequence
Length: 595
>Cisavi.CG.ENS81.R24.410826-416079.10470.p
MMIPSPVGSTPFSVKDILNLERHQMTCSDDDRASMLYQAPCGGKNEELAMQSIYQMNNME
AGQGNGEIIKPRDGKGNKHHPNTMDTNNMAAPDPHFVIYSQSEKYSKDVGEVNYTGPANT
SEAAASNLLHFSQNFQQHSYSDGRALANVAPFDMPRYGSDYFPSPNYTGYNLPFENPSST
EDPRSTFHSQTFPKPNNNAVTSASHMAPSEARGNFYQSPNHFDTVREAQENGEDFYSKTE
SPFPAYSQASSQSEQQPLPSFDRSTEKMYTEQRSADAGNQIFESSGSDPLVVDFPSPSGS
PSKLPEDGSCFTDESLPRPFSGVDIRHDDSVAQVTDSEKSDAVSTCSTSPGESEKKKLEE
DGLKSRHRTRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLAQMLKLTSTQVKIWFQN
RRYKCKRMRQDKTLELASIGPPRRVAVPVLVRDGKSCLGGPGQVPHNSAPYNVTVTRYHN
YPGSYSSCGYNTYPHNAPGYGPSAAAAAAVAGAAAAAYGNAATNGYNGFGPNMGGGQPGP
TPYPTPGLHQQHPPPMAMGNSPFQSSSVPPGHHVTQGGLHHHTPTDYMYKLGLCT
Nucleotide sequence
Length: 2,249
>Cisavi.CG.ENS81.R24.410826-416079.10470.t
ATCTTTTCACTGAACGGTAAGAAATCGTCGATGATGATCCCAAGTCCTGTTGGGTCGACA
CCATTTTCGGTGAAAGACATTTTGAACTTGGAGCGGCACCAGATGACGTGTAGCGATGAC
GACAGAGCCAGTATGTTGTACCAAGCGCCGTGCGGTGGGAAGAACGAAGAGCTGGCCATG
CAAAGCATCTACCAGATGAACAATATGGAAGCTGGTCAGGGAAACGGCGAAATCATCAAA
CCGCGTGATGGAAAAGGAAACAAACACCATCCGAACACGATGGATACGAACAATATGGCC
GCCCCAGATCCTCACTTCGTCATTTATTCCCAGAGCGAGAAGTATTCGAAGGATGTCGGT
GAGGTGAACTACACGGGACCTGCCAACACATCAGAGGCTGCGGCGTCCAATCTTTTACAT
TTTTCTCAAAACTTCCAGCAGCATTCGTACAGTGATGGTCGGGCGCTGGCTAATGTGGCG
CCGTTTGACATGCCTCGTTACGGTTCCGACTACTTCCCTTCCCCCAACTACACCGGCTAC
AACCTTCCGTTTGAGAACCCGTCAAGCACAGAGGACCCGAGATCGACTTTCCATTCGCAA
ACATTTCCAAAACCAAACAACAACGCAGTGACAAGCGCATCTCACATGGCGCCGAGCGAA
GCGCGCGGGAATTTCTACCAGAGCCCGAACCACTTTGACACTGTGAGGGAAGCCCAGGAA
AACGGGGAGGATTTTTACTCTAAAACTGAATCCCCGTTCCCAGCGTACAGCCAAGCTTCG
TCCCAAAGCGAGCAGCAACCGCTACCCAGTTTTGATCGAAGCACTGAGAAAATGTACACG
GAGCAAAGATCAGCTGATGCCGGCAACCAGATCTTCGAGTCATCCGGATCGGATCCACTG
GTCGTTGATTTTCCGTCACCCTCCGGATCACCGAGCAAACTCCCGGAAGATGGGAGCTGT
TTCACGGATGAATCACTTCCCCGTCCTTTCTCCGGTGTCGACATTCGTCATGATGATTCA
GTTGCCCAAGTCACCGATTCCGAGAAGTCGGACGCAGTGAGCACCTGCAGTACCAGTCCC
GGGGAGAGCGAAAAGAAGAAACTGGAAGAGGATGGCTTGAAGTCCCGCCACCGAACTCGC
CGGAAGCCCCGCGTTCTCTTCTCCCAAGCACAAGTGTTCGAACTCGAGAGGAGATTCAAG
CAACAGCGATACCTGTCCGCGCCCGAGCGGGAACATCTCGCCCAAATGCTGAAGCTCACA
TCGACCCAAGTGAAGATTTGGTTCCAGAATCGCCGATATAAATGCAAACGAATGCGGCAG
GACAAAACGCTGGAGCTGGCGAGCATAGGTCCTCCGCGAAGAGTGGCGGTTCCCGTACTC
GTCCGCGATGGAAAGTCGTGTCTCGGTGGGCCGGGGCAGGTCCCGCACAACTCCGCCCCG
TACAACGTCACAGTAACCCGCTACCACAACTATCCAGGCTCGTACAGTTCATGCGGATAC
AACACGTACCCGCACAACGCGCCCGGATACGGACCCAGTGCGGCAGCGGCGGCCGCAGTA
GCAGGAGCAGCCGCAGCCGCTTATGGGAATGCGGCCACGAACGGTTACAACGGCTTCGGT
CCGAATATGGGGGGTGGCCAACCGGGACCCACCCCATACCCCACCCCAGGGTTGCATCAG
CAGCACCCGCCCCCTATGGCGATGGGGAATTCTCCTTTCCAGTCATCAAGCGTACCGCCC
GGGCATCACGTGACGCAGGGTGGATTACACCATCACACACCCACAGACTATATGTATAAG
CTCGGGCTGTGCACGTGATCCGATCGTATTGTTGCTGTGCATGTGTTGTGCAATGTTCCG
CTCAATCACACGCTGCTCTGCGCGTAACATCTATTGTGACGTTTCAATTATATTTATTTC
GATTGAGTCGACAGCGAGACTGCCGCTTTAACCTCGTTACTACACGTATTTCGCATCTTC
TATATACCAGTGTTTGTGTCGCTTTTGTGAAATGGAACTTTATATTTCTCGTACTACGTG
GAACGTGTATGCATGGATCATGACGTCACATGCATGGAACATGACGTCACATGCGCCACG
TGACCAACCAAATACCTCTATAACAAACGTCTGCTATGGTCACGCATGATGGGCACTCTA
TTTCACCCTTTGATCGGATTTGTGCAATGTTCTCGCGATGGCTGCTCAACTTGGGAACTG
ATTTCGCGAATAAAATTGTTTTGACACTT
| PANTHER |
NKX-2.5 (IPR033629) - T[1-44] 2.1E-81 - T[210-267] 2.1E-81 - T[333-519] 2.1E-81 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[364-429] 6.84E-23 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[368-428] 20.261 |
| SMART |
Homeobox_dom (IPR001356) - T[370-432] 2.0E-24 |
| Pfam |
Homeobox_dom (IPR001356) - T[371-427] 4.8E-20 |
| CDD |
Homeobox_dom (IPR001356) - T[371-429] 1.07952E-23 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[392-403] 9.4E-6 - T[407-417] 9.4E-6 - T[417-426] 9.4E-6 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[403-426] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NKX26_HUMAN | 61.818 % | 173 | 1.64E-49 |
| NKX25_HUMAN | 63.704 % | 155 | 1.43E-42 |
| NKX23_HUMAN | 64 % | 154 | 1.36E-41 |