- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Cisavi.CG.ENS81.R24....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R24.410826-416079.10471.t
Possible name(s)
NKX2-3; NKX2-5; NKX2-6
Gene model
Location
R24 [410,855 / 415,339]
Amino acid sequence
Length: 271
>Cisavi.CG.ENS81.R24.410826-416079.10471.p
MMIPSPVGSTPFSVKDILNLERHQMTCSDDDRASMEAQENGEDFYSKTESPFPAYSQASS
QSEQQPLPSFDRSTEKMYTEQRSADAGNQIFESSGSDPLVVDFPSPSGSPSKLPEDGSCF
TDESLPRPFSGVDIRHDDSVAQSRHRTRRKPRVLFSQAQVFELERRFKQQRYLSAPEREH
LAQMLKLTSTQVKIWFQNRRYKCKRMRQDKTLELASIGPPRRVAVPVLVRDGKSCLGGPG
QVPHNSAPYNVTVTRYHNYPGSYSSCGYNTY
Nucleotide sequence
Length: 813
>Cisavi.CG.ENS81.R24.410826-416079.10471.t
ATGATGATCCCAAGTCCTGTTGGGTCGACACCATTTTCGGTGAAAGACATTTTGAACTTG
GAGCGGCACCAGATGACGTGTAGCGATGACGACAGAGCCAGTATGGAAGCCCAGGAAAAC
GGGGAGGATTTTTACTCTAAAACTGAATCCCCGTTCCCAGCGTACAGCCAAGCTTCGTCC
CAAAGCGAGCAGCAACCGCTACCCAGTTTTGATCGAAGCACTGAGAAAATGTACACGGAG
CAAAGATCAGCTGATGCCGGCAACCAGATCTTCGAGTCATCCGGATCGGATCCACTGGTC
GTTGATTTTCCGTCACCCTCCGGATCACCGAGCAAACTCCCGGAAGATGGGAGCTGTTTC
ACGGATGAATCACTTCCCCGTCCTTTCTCCGGTGTCGACATTCGTCATGATGATTCAGTT
GCCCAATCCCGCCACCGAACTCGCCGGAAGCCCCGCGTTCTCTTCTCCCAAGCACAAGTG
TTCGAACTCGAGAGGAGATTCAAGCAACAGCGATACCTGTCCGCGCCCGAGCGGGAACAT
CTCGCCCAAATGCTGAAGCTCACATCGACCCAAGTGAAGATTTGGTTCCAGAATCGCCGA
TATAAATGCAAACGAATGCGGCAGGACAAAACGCTGGAGCTGGCGAGCATAGGTCCTCCG
CGAAGAGTGGCGGTTCCCGTACTCGTCCGCGATGGAAAGTCGTGTCTCGGTGGGCCGGGG
CAGGTCCCGCACAACTCCGCCCCGTACAACGTCACAGTAACCCGCTACCACAACTATCCA
GGCTCGTACAGTTCATGCGGATACAACACGTAC
| PANTHER |
NKX-2.5 (IPR033629) - T[1-265] 2.7E-79 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[132-207] 3.21E-24 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[146-206] 20.261 |
| SMART |
Homeobox_dom (IPR001356) - T[148-210] 2.0E-24 |
| CDD |
Homeobox_dom (IPR001356) - T[149-207] 2.42127E-23 |
| Pfam |
Homeobox_dom (IPR001356) - T[149-205] 1.5E-20 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[170-181] 1.3E-6 - T[185-195] 1.3E-6 - T[195-204] 1.3E-6 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[181-204] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NKX26_HUMAN | 47.059 % | 186 | 8.41E-58 |
| NKX25_HUMAN | 42.029 % | 156 | 7.5E-46 |
| NKX23_HUMAN | 75.439 % | 147 | 4.82E-42 |