- Transcript 'Cisavi.CG.ENS81.R244...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R244.167219-180282.07096.t
Possible name(s)
FP565260.1; GNB5; PWP2
Gene model
Location
R244 [167,367 / 180,235]
Amino acid sequence
Length: 868
>Cisavi.CG.ENS81.R244.167219-180282.07096.p
MKFNYKFSNLVGTVYRKGNVTFINNGDSLVSPVGNRISLFDLKSNKSETLPVTTKYNIVC
VAVSPDGCTAILVDEEGEASLISFISKSVLHTHHFRKPIKCIKFSPDGSKFAVTKDNLVL
VYHAPGRNRELNPFKLIRTFYGAYNDTTCIDWTSDSRAFAVGGLDMNTRVYAAIKCDNLV
VYSLGAHKDEIVGCFFELNSLDIYTTSRDGALNVWECDTPLEGLKLAQSDNYECIAPHIL
TSTPPRYFFNKEGDFNHVTSTAFHPKTHILVTGLASGSFHIHEMPEFNLIHSLSISEHQI
TASAFNVTGDWLALGSSGLGQLLVWEWQSESYILKQQGHSNGMCCLDYSPDGRFIVTGGE
DGKVKVWNTSNGFCFVTFSEHESTVTAVRFTSSGHVIMSSSLDGTVRAFDLHRYRNFRTF
TSPRPSQFVCMGVDGSGELVAAGSRDSFEVFVWSVRTGRLLDVLAGHEAPVSSLQFSPCE
SLLASGSWDRTVILWKIGDEKGARESIDVGHDVMAVTYRGDGKELAVSTLNAEITFWDVK
TATQNGSVDCRFDIGCGRGELDRVSAKTSSFGKSFDALCYTADGSAIIAGGQTKNVCVYH
VENKLLMKKFEISSNFSFDGMEEFLDKRKMTEFGPSALIDMDTDEKIKLPGVRVGDMGAR
AFHDEVRVSGVCFSPTGREWAAVSTEGLLIYSLDANLVFDPFNLDMDITPESIRDASQVG
GKEYSGSIMMSFRLNDKPLIREVLEAVPSSSIELLCERLPPSYVDKLLDFLASEMESSPH
LHFILLWMRAILTKHGPHLKSKSNHVVAVMRHVQKSLTRKSETICKLLDANFYQSQYIIS
LAQLNRRLADTSLRHTDSDDDTMLVCSD
Nucleotide sequence
Length: 2,719
>Cisavi.CG.ENS81.R244.167219-180282.07096.t
ATGAAGTTTAATTACAAGTTTTCGAACCTGGTCGGCACAGTTTACCGCAAAGGAAACGTG
ACGTTCATAAACAATGGAGATTCACTCGTCAGTCCTGTGGGAAATCGAATATCGTTGTTC
GATCTGAAAAGCAACAAGTCGGAGACATTACCAGTGACAACAAAATACAACATTGTGTGT
GTGGCTGTGTCACCAGATGGATGCACTGCCATCCTCGTTGATGAAGAGGGAGAAGCTTCT
TTGATCAGTTTCATCAGCAAATCCGTGCTCCACACTCATCACTTCAGGAAGCCGATCAAA
TGTATCAAGTTCAGCCCCGATGGCTCCAAGTTTGCAGTGACGAAAGACAACCTGGTCCTG
GTGTACCACGCTCCTGGGAGAAACCGGGAACTCAATCCGTTCAAACTCATCCGGACTTTC
TACGGAGCGTACAACGATACAACTTGTATCGATTGGACGTCTGATAGCAGAGCGTTTGCT
GTTGGAGGATTGGACATGAACACACGTGTGTACGCCGCAATAAAGTGCGACAATCTCGTT
GTTTATTCACTCGGGGCTCATAAAGATGAAATTGTCGGTTGTTTCTTCGAGCTGAACTCG
CTGGACATCTACACGACGAGTCGAGACGGCGCGTTGAACGTGTGGGAGTGCGATACGCCA
CTGGAGGGACTCAAACTCGCACAATCCGACAATTATGAATGTATAGCACCCCATATTCTA
ACATCCACTCCCCCCAGATACTTCTTCAACAAGGAAGGAGATTTCAACCACGTCACCAGC
ACAGCCTTCCACCCCAAGACTCACATCCTGGTGACAGGTTTGGCATCCGGATCGTTCCAC
ATCCATGAGATGCCCGAGTTCAATCTCATCCATTCTCTCAGCATATCGGAGCATCAGATC
ACGGCGTCTGCGTTCAACGTGACGGGTGATTGGCTCGCGCTCGGCTCCTCCGGCCTGGGG
CAACTGCTGGTGTGGGAGTGGCAGAGCGAGTCGTACATATTGAAGCAGCAGGGACATTCG
AACGGGATGTGTTGTCTCGATTATTCACCCGATGGGAGGTTCATTGTGACAGGGGGTGAG
GATGGGAAGGTCAAAGTGTGGAACACGAGCAACGGATTCTGTTTCGTAACATTCTCGGAG
CACGAGTCAACCGTGACGGCGGTTCGCTTCACTTCATCTGGTCATGTGATCATGTCTTCG
TCACTCGATGGCACTGTGAGAGCTTTCGATTTGCACAGATACCGGAACTTCCGCACGTTC
ACGTCCCCGAGGCCGAGTCAGTTTGTGTGCATGGGGGTGGATGGGAGTGGGGAGCTTGTG
GCTGCTGGATCCCGCGATTCCTTCGAAGTATTCGTCTGGTCGGTGCGGACCGGACGCTTG
CTGGACGTGCTGGCAGGCCACGAAGCCCCAGTCTCCTCGCTTCAGTTCTCCCCATGCGAA
TCCCTCCTTGCGAGTGGATCGTGGGATCGCACGGTGATCTTGTGGAAGATCGGGGACGAG
AAAGGAGCGAGGGAGTCGATTGATGTCGGACACGATGTGATGGCGGTGACGTACCGCGGG
GACGGGAAAGAACTCGCCGTGTCGACACTCAACGCTGAGATCACGTTCTGGGATGTGAAG
ACGGCAACGCAGAATGGATCGGTCGATTGCAGATTCGACATCGGTTGCGGTCGTGGAGAG
TTGGACAGAGTTTCCGCGAAAACAAGTTCGTTCGGAAAATCGTTTGACGCTCTGTGCTAC
ACAGCTGATGGAAGCGCTATTATCGCAGGTGGGCAAACAAAGAACGTCTGCGTCTACCAC
GTGGAGAACAAACTTCTGATGAAGAAATTTGAAATTTCCAGCAACTTCTCCTTTGACGGG
ATGGAGGAATTCCTGGACAAGCGCAAGATGACAGAGTTCGGTCCATCAGCATTGATTGAC
ATGGACACTGATGAGAAGATCAAACTTCCTGGGGTGCGGGTGGGTGACATGGGGGCTCGT
GCGTTCCATGATGAGGTGCGGGTGTCGGGGGTGTGCTTCTCACCCACAGGTAGGGAGTGG
GCGGCGGTATCCACGGAGGGGTTGCTCATATATTCACTCGATGCGAACTTGGTGTTCGAC
CCGTTCAACCTTGACATGGACATCACACCGGAGAGCATCCGCGATGCATCACAGGTGGGT
GGAAAAGAATACAGTGGTTCCATTATGATGTCGTTCCGACTCAACGACAAACCACTGATC
CGCGAAGTATTGGAAGCCGTGCCGAGCAGCAGTATCGAGCTCCTGTGCGAACGCCTCCCC
CCATCCTACGTTGATAAACTGCTCGATTTCCTCGCATCCGAGATGGAATCCTCCCCACAT
CTTCACTTCATCCTCCTCTGGATGCGAGCCATCCTCACCAAACATGGTCCCCACCTCAAA
TCCAAATCCAACCACGTGGTGGCGGTCATGAGGCACGTACAGAAGAGCTTGACACGGAAG
TCCGAGACCATCTGCAAACTTTTGGACGCCAACTTCTACCAGAGCCAATACATCATATCA
CTTGCACAGCTCAACCGACGTCTTGCAGATACTTCGTTACGTCACACCGATAGTGATGAC
GACACAATGCTTGTTTGTTCAGACTAAGTGACGACATCTAAGTTTAAAATGAGCGATTAA
ATATTGACATCGCGCCAATTATTGGGGTCGGAATATTTTGCCATTTTTTCCCTTTGACCA
AATACAACGTTTTCGAAAT
| PANTHER |
PWP2 (IPR027145) - T[3-860] 0.0 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[12-237] 5.2E-21 - T[241-433] 1.1E-37 |
| SUPERFAMILY |
Quinoprotein_ADH-like_supfam (IPR011047) - T[34-230] 9.42E-36 - T[306-411] 9.42E-36 |
| SMART |
WD40_repeat (IPR001680) - T[43-83] 270.0 - T[86-123] 0.6 - T[133-172] 0.055 - T[177-216] 1.9 - T[242-283] 12.0 - T[286-326] 27.0 - T[329-368] 3.8E-9 - T[371-410] 6.5E-6 - T[413-454] 82.0 - T[457-496] 2.6E-10 - T[503-538] 49.0 - T[561-600] 130.0 - T[655-692] 110.0 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[140-547] 41.974 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[203-217] . - T[355-369] . |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[253-542] 2.01E-59 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[336-377] 15.722 - T[378-419] 12.246 - T[464-505] 14.652 |
| Pfam |
WD40_repeat (IPR001680) - T[337-368] 2.5E-8 - T[374-409] 0.0022 - T[459-496] 6.0E-7 |
| SUPERFAMILY |
Quino_amine_DH_bsu (IPR011044) - T[507-696] 2.51E-9 |
| Pfam |
SSU_processome_Utp12 (IPR007148) - T[735-840] 2.8E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| POC1A_HUMAN | 26.814 % | 103 | 1.82E-23 |
| GNB5_HUMAN | 34.615 % | 107 | 6.3E-25 |
| PWP2_HUMAN | 55.341 % | 1034 | 0 |