- Transcript 'Moocci.CG.ELv1_2.S20...' >
- Transcript 'Moocci.CG.ELv1_2.S59...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Boleac.CG.SB_v3.S23....' >
- Transcript 'Cisavi.CG.ENS81.R244...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R244.167219-180282.07097.t
Possible name(s)
FP565260.1; GNB5; PWP2
Gene model
Location
R244 [167,399 / 180,235]
Amino acid sequence
Length: 883
>Cisavi.CG.ENS81.R244.167219-180282.07097.p
MKFNYKFSNLVGTVYRKGNVTFINNGDSLVSPVGNRISLFDLKSNKSETLPVTTKYNIVC
VAVSPDGCTAILVDEEGEASLISFISKSVLHTHHFRKPIKCIKFSPDGSKFAVTKDNLVL
VYHAPGRNRELNPFKLIRTFYGAYNDTTCIDWTSDSRAFAVGGLDMNTRVYAAIKCDNLV
VYSLGAHKDEIVGCFFELNSLDIYTTSRDGALNVWDAVQGMEDVDAVGTKEKEDLDESET
KKPKIFYECIAPHILTSTPPRYFFNKEGDFNHVTSTAFHPKTHILVTGLASGSFHIHEMP
EFNLIHSLSISEHQITASAFNVTGDWLALGSSGLGQLLVWEWQSESYILKQQGHSNGMCC
LDYSPDGRFIVTGGEDGKVKVWNTSNGFCFVTFSEHESTVTAVRFTSSGHVIMSSSLDGT
VRAFDLHRYRNFRTFTSPRPSQFVCMGVDGSGELVAAGSRDSFEVFVWSVRTGRLLDVLA
GHEAPVSSLQFSPCESLLASGSWDRTVILWKIGDEKGARESIDVGHDVMAVTYRGDGKEL
AVSTLNAEITFWDVKTATQNGSVDCRFDIGCGRGELDRVSAKTSSFGKSFDALCYTADGS
AIIAGGQTKNVCVYHVENKLLMKKFEISSNFSFDGMEEFLDKRKMTEFGPSALIDMDTDE
KIKLPGVRVGDMGARAFHDEVRVSGVCFSPTGREWAAVSTEGLLIYSLDANLVFDPFNLD
MDITPESIRDASQVGGKEYSGSIMMSFRLNDKPLIREVLEAVPSSSIELLCERLPPSYVD
KLLDFLASEMESSPHLHFILLWMRAILTKHGPHLKSKSNHVVAVMRHVQKSLTRKSETIC
KLLDANFYQSQYIISLAQLNRRLADTSLRHTDSDDDTMLVCSD
Nucleotide sequence
Length: 2,732
>Cisavi.CG.ENS81.R244.167219-180282.07097.t
ATGAAGTTTAATTACAAGTTTTCGAACCTGGTCGGCACAGTTTACCGCAAAGGAAACGTG
ACGTTCATAAACAATGGAGATTCACTCGTCAGTCCTGTGGGAAATCGAATATCGTTGTTC
GATCTGAAAAGCAACAAGTCGGAGACATTACCAGTGACAACAAAATACAACATTGTGTGT
GTGGCTGTGTCACCAGATGGATGCACTGCCATCCTCGTTGATGAAGAGGGAGAAGCTTCT
TTGATCAGTTTCATCAGCAAATCCGTGCTCCACACTCATCACTTCAGGAAGCCGATCAAA
TGTATCAAGTTCAGCCCCGATGGCTCCAAGTTTGCAGTGACGAAAGACAACCTGGTCCTG
GTGTACCACGCTCCTGGGAGAAACCGGGAACTCAATCCGTTCAAACTCATCCGGACTTTC
TACGGAGCGTACAACGATACAACTTGTATCGATTGGACGTCTGATAGCAGAGCGTTTGCT
GTTGGAGGATTGGACATGAACACACGTGTGTACGCCGCAATAAAGTGCGACAATCTCGTT
GTTTATTCACTCGGGGCTCATAAAGATGAAATTGTCGGTTGTTTCTTCGAGCTGAACTCG
CTGGACATCTACACGACGAGTCGAGACGGCGCGTTGAACGTGTGGGATGCTGTGCAAGGC
ATGGAGGATGTGGATGCGGTGGGAACAAAGGAAAAAGAAGACTTGGATGAATCGGAAACC
AAGAAACCAAAGATTTTTTATGAATGTATAGCACCCCATATTCTAACATCCACTCCCCCC
AGATACTTCTTCAACAAGGAAGGAGATTTCAACCACGTCACCAGCACAGCCTTCCACCCC
AAGACTCACATCCTGGTGACAGGTTTGGCATCCGGATCGTTCCACATCCATGAGATGCCC
GAGTTCAATCTCATCCATTCTCTCAGCATATCGGAGCATCAGATCACGGCGTCTGCGTTC
AACGTGACGGGTGATTGGCTCGCGCTCGGCTCCTCCGGCCTGGGGCAACTGCTGGTGTGG
GAGTGGCAGAGCGAGTCGTACATATTGAAGCAGCAGGGACATTCGAACGGGATGTGTTGT
CTCGATTATTCACCCGATGGGAGGTTCATTGTGACAGGGGGTGAGGATGGGAAGGTCAAA
GTGTGGAACACGAGCAACGGATTCTGTTTCGTAACATTCTCGGAGCACGAGTCAACCGTG
ACGGCGGTTCGCTTCACTTCATCTGGTCATGTGATCATGTCTTCGTCACTCGATGGCACT
GTGAGAGCTTTCGATTTGCACAGATACCGGAACTTCCGCACGTTCACGTCCCCGAGGCCG
AGTCAGTTTGTGTGCATGGGGGTGGATGGGAGTGGGGAGCTTGTGGCTGCTGGATCCCGC
GATTCCTTCGAAGTATTCGTCTGGTCGGTGCGGACCGGACGCTTGCTGGACGTGCTGGCA
GGCCACGAAGCCCCAGTCTCCTCGCTTCAGTTCTCCCCATGCGAATCCCTCCTTGCGAGT
GGATCGTGGGATCGCACGGTGATCTTGTGGAAGATCGGGGACGAGAAAGGAGCGAGGGAG
TCGATTGATGTCGGACACGATGTGATGGCGGTGACGTACCGCGGGGACGGGAAAGAACTC
GCCGTGTCGACACTCAACGCTGAGATCACGTTCTGGGATGTGAAGACGGCAACGCAGAAT
GGATCGGTCGATTGCAGATTCGACATCGGTTGCGGTCGTGGAGAGTTGGACAGAGTTTCC
GCGAAAACAAGTTCGTTCGGAAAATCGTTTGACGCTCTGTGCTACACAGCTGATGGAAGC
GCTATTATCGCAGGTGGGCAAACAAAGAACGTCTGCGTCTACCACGTGGAGAACAAACTT
CTGATGAAGAAATTTGAAATTTCCAGCAACTTCTCCTTTGACGGGATGGAGGAATTCCTG
GACAAGCGCAAGATGACAGAGTTCGGTCCATCAGCATTGATTGACATGGACACTGATGAG
AAGATCAAACTTCCTGGGGTGCGGGTGGGTGACATGGGGGCTCGTGCGTTCCATGATGAG
GTGCGGGTGTCGGGGGTGTGCTTCTCACCCACAGGTAGGGAGTGGGCGGCGGTATCCACG
GAGGGGTTGCTCATATATTCACTCGATGCGAACTTGGTGTTCGACCCGTTCAACCTTGAC
ATGGACATCACACCGGAGAGCATCCGCGATGCATCACAGGTGGGTGGAAAAGAATACAGT
GGTTCCATTATGATGTCGTTCCGACTCAACGACAAACCACTGATCCGCGAAGTATTGGAA
GCCGTGCCGAGCAGCAGTATCGAGCTCCTGTGCGAACGCCTCCCCCCATCCTACGTTGAT
AAACTGCTCGATTTCCTCGCATCCGAGATGGAATCCTCCCCACATCTTCACTTCATCCTC
CTCTGGATGCGAGCCATCCTCACCAAACATGGTCCCCACCTCAAATCCAAATCCAACCAC
GTGGTGGCGGTCATGAGGCACGTACAGAAGAGCTTGACACGGAAGTCCGAGACCATCTGC
AAACTTTTGGACGCCAACTTCTACCAGAGCCAATACATCATATCACTTGCACAGCTCAAC
CGACGTCTTGCAGATACTTCGTTACGTCACACCGATAGTGATGACGACACAATGCTTGTT
TGTTCAGACTAAGTGACGACATCTAAGTTTAAAATGAGCGATTAAATATTGACATCGCGC
CAATTATTGGGGTCGGAATATTTTGCCATTTT
| PANTHER |
PWP2 (IPR027145) - T[3-875] 0.0 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[6-217] 1.3E-21 - T[264-441] 9.3E-36 |
| SUPERFAMILY |
Quinoprotein_ADH-like_supfam (IPR011047) - T[32-225] 2.98E-34 - T[279-387] 2.98E-34 |
| SMART |
WD40_repeat (IPR001680) - T[43-83] 270.0 - T[86-123] 0.6 - T[133-172] 0.055 - T[177-216] 0.65 - T[257-298] 12.0 - T[301-341] 27.0 - T[344-383] 3.8E-9 - T[386-425] 6.5E-6 - T[428-469] 82.0 - T[472-511] 2.6E-10 - T[518-553] 49.0 - T[576-615] 130.0 - T[670-707] 110.0 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[140-225] 10.311 - T[266-562] 41.051 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[184-216] 9.138 - T[351-392] 15.722 - T[393-434] 12.246 - T[479-520] 14.652 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[203-217] . - T[370-384] . |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[268-557] 6.77E-60 |
| Pfam |
WD40_repeat (IPR001680) - T[352-383] 2.6E-8 - T[389-424] 0.0023 - T[474-511] 6.1E-7 |
| Pfam |
SSU_processome_Utp12 (IPR007148) - T[750-855] 2.8E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| POC1A_HUMAN | 28.185 % | 99 | 7.56E-22 |
| GNB5_HUMAN | 34.615 % | 107 | 6.41E-25 |
| PWP2_HUMAN | 54.556 % | 1018 | 0 |