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- Transcript 'KH2012:KH.C4.565.v1....' >
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- Transcript 'Cisavi.CG.ENS81.R247...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R247.178990-187341.01200.t
Possible name(s)
CCT4; CCT5; HSPD1
Gene model
Location
R247 [178,989 / 187,341]
Amino acid sequence
Length: 597
>Cisavi.CG.ENS81.R247.178990-187341.01200.p
THKSILPATRAICRGYAKDLKFGSSARQEMLAGVNQLADAVAVTMGPKGRNVVLEQSWGS
PKVTKDGVTVAKGIEFKDKIKNIGAKLVQDVANSTNEEAGDGTTTATILARAIAREGSDK
ISRGTNPIEMRRGIQKAVQVVIEELKKMSKQVTTPEEIAQVATISANGDKVFDCLPPRAM
EKVGRNGVITVKDGKTLNDELEVIEGMKFDRGYISPYFINSAKGQKVEFQNAFVLLSEKK
ISTVQSIVPALELANAQRKPLVIIAEDVDGEALSTLVINRLKVGLQIAAVKAPGFGDNRK
NTMKDIAVATGGLVFGEDALELKIEDVQAHDLGQVEEITITKDDCLLLRGKGKSEDIERR
IGQIYEQIEDTSSDYEREKLNERLAKLSSGVAVLKVGGSSEVEVNEKKDRVNDALNATRA
AVEEGIVPGGGVALLRCHDAVTALKGATKDEQAGVDIIMKVLRNPCAQIADNAGMEGQLV
AEKLLQHTGDYGYDAREDKFCNMLEAGILDPTKVVKQALLDASGVASLLTTAECVVTEEP
KDEPAMPAGGGMGGMGGMGGMGVTLACIERGVVFTSIFETVLVEILRCFVIITKQQI
Nucleotide sequence
Length: 1,856
>Cisavi.CG.ENS81.R247.178990-187341.01200.t
TTCCTGTTAGAATCTTTTTTCCATTATTTAAATCACTGTCCATCATGCATCGATTTGCTA
TGTTGACCCACAAATCCATTCTTCCCGCTACAAGAGCAATATGCAGGGGGTACGCGAAGG
ACCTCAAATTCGGTTCCAGTGCAAGACAAGAAATGTTAGCAGGTGTCAACCAATTAGCTG
ATGCGGTCGCCGTGACGATGGGACCAAAGGGTCGGAACGTGGTCCTTGAGCAGTCGTGGG
GTTCACCCAAGGTCACCAAGGATGGCGTCACTGTAGCGAAAGGAATTGAATTCAAAGACA
AAATCAAGAACATCGGCGCGAAGCTCGTGCAAGATGTGGCGAACAGCACGAACGAGGAGG
CCGGCGACGGCACGACAACGGCGACCATCCTCGCGCGAGCCATCGCGAGGGAAGGAAGCG
ATAAGATCAGTCGCGGCACCAACCCCATCGAAATGCGCCGCGGCATACAGAAGGCCGTGC
AGGTTGTCATCGAGGAATTGAAGAAAATGTCGAAACAAGTTACAACCCCGGAGGAAATCG
CGCAAGTCGCCACGATATCGGCCAACGGCGACAAGGTGTTCGATTGCCTTCCCCCACGAG
CGATGGAGAAGGTGGGAAGGAATGGTGTGATCACCGTGAAAGATGGGAAGACATTGAACG
ATGAGTTGGAAGTGATTGAAGGGATGAAGTTCGATCGCGGCTACATCTCCCCTTATTTTA
TAAACTCCGCAAAAGGACAAAAAGTGGAATTCCAAAACGCTTTCGTACTATTGTCAGAAA
AGAAAATCAGCACAGTGCAATCGATTGTTCCCGCACTTGAGCTGGCGAACGCTCAGCGGA
AACCACTCGTGATCATCGCGGAAGACGTGGACGGAGAGGCTCTCAGCACGCTCGTCATCA
ATCGACTGAAGGTCGGACTTCAAATTGCCGCTGTCAAAGCTCCAGGTTTTGGTGACAACC
GCAAGAATACAATGAAAGACATAGCGGTGGCTACCGGGGGACTTGTGTTTGGGGAGGATG
CGTTGGAATTGAAGATTGAAGATGTTCAAGCGCATGATCTTGGGCAGGTTGAAGAGATCA
CGATCACCAAGGATGATTGTCTCCTGCTCCGAGGGAAGGGGAAGTCGGAAGATATTGAGA
GGAGGATCGGACAGATCTATGAGCAGATTGAAGACACCAGCAGCGATTACGAGCGCGAGA
AACTCAACGAACGATTAGCGAAGTTGTCCAGTGGAGTAGCCGTGCTGAAGGTAGGTGGCA
GTAGTGAGGTGGAGGTAAATGAGAAGAAGGATCGAGTGAACGACGCTCTCAATGCGACAC
GAGCCGCTGTGGAAGAAGGGATTGTTCCTGGAGGCGGGGTTGCTCTTCTTCGTTGCCATG
ACGCTGTCACTGCGCTCAAGGGCGCCACCAAAGACGAACAGGCAGGAGTTGACATCATAA
TGAAAGTCCTTCGCAACCCCTGCGCTCAAATAGCTGACAACGCTGGCATGGAGGGTCAGC
TTGTTGCGGAGAAATTGTTGCAACATACAGGCGACTATGGTTACGACGCAAGAGAAGACA
AGTTCTGCAACATGTTGGAAGCTGGAATTCTCGATCCAACCAAGGTGGTCAAGCAAGCTT
TGTTGGACGCGTCTGGTGTCGCCTCGCTGCTCACAACCGCCGAGTGTGTCGTCACAGAGG
AACCGAAGGACGAACCCGCCATGCCGGCAGGTGGCGGTATGGGGGGCATGGGAGGAATGG
GTGGTATGGGGGTCACTTTAGCCTGTATAGAGAGGGGAGTTGTATTTACTTCTATATTTG
AAACGGTATTAGTAGAAATATTACGATGTTTCGTTATCATTACAAAACAACAAATT
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[12-552] 3.0E-251 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[14-150] 6.96E-76 - T[423-538] 6.96E-76 |
| Hamap |
Chaprnin_Cpn60 (IPR001844) - T[16-561] 35.483 |
| TIGRFAM |
Chaprnin_Cpn60 (IPR001844) - T[17-541] 5.5E-212 |
| CDD |
Chaprnin_Cpn60 (IPR001844) - T[18-538] 0.0 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[21-150] 3.0E-225 - T[426-536] 3.0E-225 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[37-538] 1.2E-82 |
| PRINTS |
Chaprnin_Cpn60 (IPR001844) - T[41-67] 3.0E-66 - T[97-124] 3.0E-66 - T[282-305] 3.0E-66 - T[365-390] 3.0E-66 - T[413-434] 3.0E-66 |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[151-205] 3.0E-225 - T[389-425] 3.0E-225 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[152-217] 1.08E-19 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[198-391] 2.15E-72 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[206-388] 3.0E-225 |
| ProSitePatterns |
Chaperonin_Cpn60_CS (IPR018370) - T[420-431] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CH60_HUMAN | 71.062 % | 777 | 0 |