Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,095

>Cisavi.CG.ENS81.R24.90700-104391.07371.p
LVSQNFIVEERSKGGKIKSRHSKLEDCHYIGVIHNHDSFSKVALSLCNGLQGVIAKGDDT
FFIEPKWNHTMNETGEGPHPHIIVKRSTVVRVDEKKAEVGHCGNTGKFVFIRLVNMRFKH
DLAESERGEQDKHTEKRSRRESNSADFDSFSNHRTSAGRDRILGGRRSKRSVSVERNVET
MVVADKKLMITHGKQELEKYILTIMNIVAGFYHDASIGNAVNIIITRVIILTEDQPGLEI
NNHAGISLGSFCEWQAGVNINATGDSSDSGLAHHDNAVLLTGNNICVNSYEPCATLGMAN
VGGMCESDRSCNINQDTGLASAFTIAHEMGHNFGMEHDGPKNDCGPQSGKPSQIMSPQLT
KYTSPFSWSVCSKNYITDFLDAGSGECLLNSPPQRDFQLPTELPGQLHDADEQCRLQYGA
ASRQCKYGDVCRELWCLSRSGYCVTNSMPAAEGTNCSDITPRGWCYRGHCVPYGYRANSV
DGQWADWTSWAECSRTCGTGVSSSHRSCDNPAPEHGGRYCVGGRKRYRSCNTQACPNAGS
SDFRQEQCARFDTEPFQGRYFNWIAFNGGYQVNPCALNCKPQGYSFYAERAPAVVDGTRC
FSNSLDMCINGECHHVGCDHVLHSDAVEDKCRVCGGDGSTCHTEAGVFNQLVTRTQYQEV
VTIPKGSVNIFIQELEISVQNYIALQNTNGEEYINGGWAIDWPRKFEIAGTMFSYKRPAD
EPESLQALGPTTEDLVVMMLLQEPNRGLKYEYNVPIAREGSTSGEESAFLWTHGDWTPCS
ASCAGGTQRRPIECRRIDDDTLVQHSYCNPATMPSEHIQSCNVEPCAPRWISGSWGHCSR
TCGGGHHTRTVVCMRAITHTEDEVVDDRYCTDRKPQSTQSCNDDTCPARWHTGSWTRCNP
SCGSGWKRRSVTCASADGLETYGESECDVNQKPSIRARCMNRPCRPRWIAGKWGQCNPSC
GSGWKRRSVTCASADGLETYGESKCDVNQKPSIRARCLNRPCRPRWIAGKWSQCSGTCGQ
GMKLRRVVCVDPMTKRPSHACFYSRKPKRIISCNAKCEETEVPPEECADNLAYCPMVLQL
NFCNRKYFRKVCCHT

Nucleotide sequence

Length: 3,285

>Cisavi.CG.ENS81.R24.90700-104391.07371.t
CTAGTTTCACAAAACTTTATCGTGGAAGAAAGATCCAAAGGAGGAAAAATTAAATCCCGA
CATTCCAAGTTAGAGGACTGTCATTATATTGGAGTCATTCACAATCATGATAGCTTCTCC
AAAGTAGCGCTCAGTCTTTGCAATGGATTGCAAGGGGTGATTGCGAAAGGAGATGACACA
TTCTTCATCGAGCCGAAATGGAACCACACAATGAACGAGACGGGGGAGGGACCGCATCCT
CACATCATTGTCAAGCGATCCACAGTGGTCAGGGTTGATGAAAAGAAAGCAGAGGTCGGA
CACTGCGGTAATACCGGTAAGTTTGTCTTTATTCGGTTGGTAAATATGCGCTTTAAACAT
GACCTTGCAGAATCTGAACGTGGAGAGCAAGACAAACACACGGAAAAACGAAGCAGAAGG
GAATCTAATTCCGCTGATTTTGATTCATTTTCAAACCACCGAACCAGTGCTGGCCGAGAC
CGTATTCTCGGGGGAAGGCGTAGCAAACGCTCCGTGAGCGTTGAACGGAATGTTGAGACC
ATGGTTGTGGCCGACAAAAAGCTGATGATCACGCATGGGAAGCAAGAGCTTGAGAAATAC
ATCCTCACCATCATGAATATTGTGGCCGGATTTTACCACGACGCAAGCATCGGCAACGCT
GTGAACATCATAATAACACGCGTCATCATCCTTACCGAAGACCAGCCTGGATTAGAAATC
AACAACCACGCCGGTATCTCACTGGGCAGTTTCTGCGAGTGGCAAGCCGGGGTTAACATC
AACGCCACGGGTGATTCATCAGATTCTGGGTTGGCACATCACGACAATGCTGTGTTGCTA
ACTGGAAACAACATATGCGTGAATAGCTACGAGCCTTGCGCTACATTGGGCATGGCGAAC
GTCGGAGGTATGTGCGAGTCTGATAGAAGCTGCAACATCAACCAAGACACAGGACTCGCA
TCGGCATTCACCATCGCCCATGAAATGGGTCATAATTTTGGAATGGAGCATGACGGCCCC
AAGAACGACTGCGGCCCGCAAAGTGGTAAACCTTCTCAGATCATGTCTCCCCAACTTACC
AAGTACACGAGTCCCTTCAGCTGGTCGGTTTGCTCCAAGAACTACATCACTGATTTCCTT
GATGCTGGCTCGGGGGAGTGTCTTCTTAACAGCCCGCCGCAGCGAGATTTTCAATTGCCA
ACGGAATTACCAGGCCAGCTACACGACGCTGATGAACAGTGCCGGTTGCAGTACGGAGCC
GCCTCCCGACAGTGCAAATACGGGGATGTCTGTAGAGAGTTATGGTGCTTAAGCAGAAGC
GGTTATTGTGTAACAAACAGCATGCCGGCTGCAGAGGGAACTAATTGCTCAGATATTACT
CCGCGCGGGTGGTGCTACCGGGGGCATTGTGTGCCATATGGTTACCGCGCAAATTCTGTT
GACGGTCAGTGGGCGGACTGGACTTCCTGGGCGGAGTGTTCCAGAACTTGTGGTACCGGT
GTGAGCTCTTCACACCGAAGCTGCGATAACCCTGCGCCCGAACATGGCGGCCGATACTGC
GTGGGTGGGCGCAAGCGATATCGATCATGCAACACTCAGGCATGTCCAAATGCTGGTAGC
AGTGATTTCAGACAAGAACAATGTGCTCGATTCGACACTGAACCCTTTCAAGGAAGATAT
TTCAACTGGATCGCTTTCAACGGAGGTTACCAAGTGAACCCGTGCGCGCTTAACTGCAAA
CCGCAAGGTTACAGTTTCTATGCTGAGAGGGCACCTGCAGTGGTGGACGGAACACGATGT
TTCTCCAACTCACTGGACATGTGCATCAACGGCGAATGCCATCACGTTGGATGTGATCAT
GTTCTGCATTCTGACGCTGTTGAGGATAAATGTCGTGTTTGCGGCGGCGACGGATCAACT
TGCCATACCGAAGCTGGAGTCTTCAACCAGCTTGTCACGAGAACACAATATCAAGAAGTT
GTCACCATTCCAAAAGGCTCGGTCAACATATTCATTCAGGAATTGGAAATATCTGTTCAA
AACTATATCGCTCTACAAAATACTAACGGTGAAGAATATATTAATGGTGGATGGGCGATC
GATTGGCCAAGAAAGTTCGAGATTGCCGGCACCATGTTTTCATACAAGCGTCCTGCGGAT
GAACCAGAGTCACTGCAAGCGCTCGGCCCAACGACTGAGGATCTTGTTGTAATGATGTTG
TTGCAAGAACCCAACCGAGGATTGAAATACGAATACAACGTTCCAATCGCAAGGGAGGGA
AGCACAAGCGGGGAGGAGTCAGCTTTTCTTTGGACCCATGGGGATTGGACGCCTTGTAGT
GCCTCATGTGCCGGTGGCACACAGCGTCGCCCAATCGAGTGCCGACGTATTGATGATGAT
ACACTGGTGCAACACAGTTATTGCAATCCAGCCACTATGCCGAGCGAGCATATTCAATCT
TGCAATGTTGAGCCATGTGCACCACGTTGGATCAGCGGGTCGTGGGGACACTGCAGCCGC
ACATGTGGCGGTGGACACCACACAAGGACCGTTGTTTGCATGCGCGCCATCACACACACC
GAAGACGAAGTAGTGGATGACAGATATTGCACCGACCGCAAACCTCAATCCACTCAATCG
TGCAATGATGATACCTGTCCGGCTAGATGGCACACTGGCAGTTGGACACGGTGCAATCCG
TCGTGTGGCTCGGGTTGGAAGAGAAGATCAGTGACATGCGCATCTGCTGACGGACTGGAG
ACTTATGGCGAAAGTGAATGCGATGTCAACCAAAAACCGTCCATTCGAGCTCGGTGTATG
AATAGACCATGTCGACCACGTTGGATTGCGGGGAAATGGGGACAGTGCAATCCGTCGTGT
GGCTCGGGTTGGAAGAGAAGATCAGTGACATGCGCATCTGCTGACGGACTGGAGACTTAT
GGCGAAAGTAAATGCGATGTCAACCAAAAACCGTCCATTCGAGCTCGGTGTTTGAATAGA
CCATGCCGACCACGTTGGATTGCAGGCAAATGGAGTCAGTGTTCCGGAACTTGCGGACAA
GGGATGAAACTACGGCGTGTGGTGTGTGTGGATCCTATGACCAAACGGCCCTCACACGCG
TGTTTTTATAGTAGGAAACCGAAGAGAATTATATCTTGTAATGCGAAATGCGAAGAAACG
GAAGTCCCCCCAGAAGAATGTGCGGATAACTTGGCATATTGCCCAATGGTGCTGCAGTTA
AATTTCTGCAATCGAAAGTACTTCCGAAAGGTGTGTTGTCATACT

InterProScan

Pfam	Peptidase_M12B_N (IPR002870) - T[1-83] 1.4E-16
Gene3D	MetalloPept_cat_dom_sf (IPR024079) - T[171-412] 3.4E-86
ProSiteProfiles	Peptidase_M12B (IPR001590) - T[176-392] 23.457
Pfam	Peptidase_M12B (IPR001590) - T[177-392] 1.1E-22
Gene3D	TSP1_rpt_sf (IPR036383) - T[479-535] 1.1E-16 - T[768-826] 6.0E-9 - T[828-887] 5.7E-10 - T[888-944] 1.9E-6 - T[947-1002] 2.3E-6 - T[1005-1057] 4.0E-7
SUPERFAMILY	TSP1_rpt_sf (IPR036383) - T[479-535] 5.49E-13 - T[769-826] 2.22E-9 - T[821-886] 1.96E-10 - T[887-944] 6.93E-7 - T[948-1002] 1.7E-7 - T[1006-1055] 9.16E-9
ProSiteProfiles	TSP1_rpt (IPR000884) - T[481-536] 13.396 - T[767-825] 9.737 - T[826-887] 11.631 - T[889-945] 9.22 - T[1002-1058] 10.488
SMART	TSP1_rpt (IPR000884) - T[484-536] 4.4E-13 - T[770-827] 8.4E-4 - T[829-887] 1.6E-4 - T[889-945] 0.079 - T[947-1003] 0.44 - T[1005-1058] 6.4E-4
Pfam	TSP1_rpt (IPR000884) - T[486-535] 3.4E-7 - T[774-826] 0.043 - T[833-886] 0.0049 - T[892-944] 0.06 - T[951-1002] 0.075 - T[1009-1035] 2.6E-4
Pfam	ADAM_spacer1 (IPR010294) - T[645-755] 1.1E-33
ProSiteProfiles	PLAC (IPR010909) - T[1063-1095] 9.497
Pfam	PLAC (IPR010909) - T[1067-1095] 3.7E-8