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TRANSCRIPT CARD

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  1. Clone 'AJ493863' > 
  2. Transcript 'KH2012:KH.C9.386.v1....' > 
  3. Transcript 'Cisavi.CG.ENS81.R25....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R25.1433924-1436382.14902.t

Possible name(s)

NHLH1; TWIST1; TWIST2

Gene model

Cisavi.CG.ENS81.R25.1433924-1436382

Location

R25 [1,433,923 / 1,436,382]

Sequences

Amino acid sequence

Length: 305

>Cisavi.CG.ENS81.R25.1433924-1436382.14902.p
QANSRKRRSDTDVTRESKRRRSNCGKERDRLSVFNQALEALQGVIPIRLTEQRKLHKKQT
LQLAIRYINFLRGCLDGSRDWDDRSRFWCQSQDEMIITAIDQAAAPHITSSDVLLSEITS
QPMTSSATTQQQVTYTVDTSQHMTSHVNTSNDVEPAKETYFNQPITSLPQHSQLQHQNMT
SQLHSDVIHPTQSEFLDDPNHDAAYLQYDPTASFLTSYFQKNDVTHSNIFQPMTQSSEYD
FTASANDVSPPTYDLNSINDVTNHSNDVIYNQSTTDSAFADLEAILSSPENNCFLPGSPE
SGYNS

Nucleotide sequence

Length: 918

>Cisavi.CG.ENS81.R25.1433924-1436382.14902.t
CAGGCAAATTCTAGAAAACGACGTTCTGATACTGACGTCACAAGGGAATCAAAGAGACGA
CGTTCGAATTGTGGAAAAGAGCGCGATCGTCTTAGCGTCTTCAATCAGGCACTGGAGGCG
CTACAGGGCGTCATTCCAATTCGTTTAACAGAGCAGAGGAAACTGCACAAGAAACAAACT
CTGCAGCTGGCGATTCGTTACATCAATTTCCTCCGTGGCTGCTTGGATGGTTCGCGGGAT
TGGGATGATAGGAGTCGATTTTGGTGTCAATCCCAGGACGAGATGATCATCACCGCCATT
GACCAGGCTGCTGCTCCTCATATTACGTCATCTGATGTTTTGTTGTCGGAAATTACATCC
CAACCGATGACGTCATCCGCTACTACACAACAACAAGTGACGTACACGGTCGATACGTCA
CAACACATGACGTCACATGTTAATACATCCAATGATGTAGAACCTGCAAAAGAAACTTAT
TTCAACCAACCTATTACGTCACTTCCACAACATAGCCAGCTTCAGCATCAAAATATGACG
TCACAATTACATAGTGACGTAATTCATCCCACCCAATCTGAGTTTCTCGACGATCCAAAT
CATGACGCAGCATATTTGCAATACGACCCGACTGCGTCATTTCTTACATCATATTTTCAA
AAGAATGACGTCACACACTCCAATATTTTCCAACCGATGACGCAATCATCGGAATATGAC
TTCACCGCTTCCGCAAATGACGTGTCACCGCCCACATATGACTTAAATTCGATTAATGAC
GTCACGAACCATAGCAATGATGTCATTTATAATCAATCGACCACGGATAGCGCATTCGCA
GATTTAGAAGCGATTTTGTCGTCACCGGAAAACAATTGCTTTTTGCCGGGAAGCCCCGAA
AGTGGGTACAATTCGTAA

InterProScan

PANTHER
Twist-related (IPR015789) - T[3-220] 1.1E-40
Gene3D
HLH_DNA-bd_sf (IPR036638) - T[14-81] 3.6E-13
CDD
bHLH_dom (IPR011598) - T[15-72] 4.72865E-8
SUPERFAMILY
HLH_DNA-bd_sf (IPR036638) - T[15-89] 1.27E-11
ProSiteProfiles
bHLH_dom (IPR011598) - T[18-71] 12.011
Pfam
bHLH_dom (IPR011598) - T[19-71] 1.6E-8
SMART
bHLH_dom (IPR011598) - T[24-77] 0.0017

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value