- Transcript 'KH2012:KH.C8.38.v9.A...' >
- Transcript 'KH2012:KH.C8.38.v2.A...' >
- Transcript 'KH2012:KH.C8.356.v1....' >
- Molecular Tool 'Mesp>dnSar1' >
- Transcript 'Cisavi.CG.ENS81.R25....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R25.2342032-2361410.16218.t
Possible name(s)
GRIP1; GRIP2; LNX1
Gene model
Location
R25 [2,342,031 / 2,361,341]
Amino acid sequence
Length: 946
>Cisavi.CG.ENS81.R25.2342032-2361410.16218.p
EEERGEAVVNLVKVEGIPLGLTVSGGADKEGRPRVSNLRASGIAARSDQLQVGDTITSVN
GIRSTKLKHGEIISLLKNISERVCLEIEYLLPPTTVQTTSIIQKTTEIFLRKENDSFGFV
LRGGNHGQHCRSRPLVVTHIRPDSPAAKEGTLKTGDRIVSVGSTPLISSTLPEAIAELQG
CGEEAVLTIEYDVSVMDAVANASGPLLVEVSKDPGAELGITLAKSTYRKKPVICIDRVKP
ASISDRCGALHIGDQILSIDNISMATSSVREASDLLQSSSDQVKLEIHPVSHLAIAASPF
APLTSSQEQRVFNAFSLSHASVPNRHPVQFRTAVTSLLPLSTTITIMVKAPMVAAGRNAN
RIKLHSLSFTMHGNPPNTPWSPISPQFTPRCHPPKNASWPHMGLSLASADYLSNNQVVHT
EVTEVQLLASDDIIDPMTSSALPNFGMQLQGGIFSTEVLTSPPFISFIEPDRPADRCGVL
QSGDRLMSVNGYPCEDCTLDEVAQMLGDAYLSGAVTINRNFKIEPKDFCFKLRIMITNVQ
ASTLGYVETRLNITEKYCCDLMCLPLHVCNALISLLINPISPTDEGERGFISYTVELKRH
GGPLGITISGTEEAFDPIIISGLTPGGLADRWVRFYIGGLPLEDLPIGGSFLHIIPIVTS
QSEPITELSDPEDDILPPPMGPLPNHTPTDPPSDPLHRLKGRGVRPGPAGAASVDSAVDS
WGDSDAYRTRSSTGGRDISHVFRHLGDTRPYSVANQPIPRAKVSLKRRSIPHPTTNPPPH
AATNPPAPAPPVAEWQRALDDLQSVGQSSGYLHDLESKLTIGSEALGRHPVYNHRRRAVA
KNSASPSLPLRFHRVTIEMKLSPQLTLFKESLNEDFGFSLSDGQIEPGVFVHTVRHGGPA
HRCGLLPFDRLLQVNGTTLHDSDCTRAIPVVSGARERLDVLVSRHP
Nucleotide sequence
Length: 2,838
>Cisavi.CG.ENS81.R25.2342032-2361410.16218.t
GAGGAAGAAAGGGGGGAGGCTGTTGTTAATCTCGTTAAAGTTGAGGGAATTCCCCTCGGG
CTCACTGTCTCTGGAGGCGCCGATAAGGAGGGGAGACCTCGTGTGTCCAATCTACGTGCA
TCCGGTATTGCTGCAAGGAGTGACCAACTACAAGTTGGCGACACAATCACCTCAGTTAAC
GGGATTCGATCCACCAAGCTCAAACACGGGGAAATTATCAGTTTGTTGAAAAATATCAGC
GAGAGAGTTTGCCTCGAAATAGAATACCTTCTACCTCCTACAACGGTGCAGACCACCTCA
ATCATCCAGAAAACGACCGAGATATTCCTGCGCAAGGAAAACGACTCGTTTGGCTTCGTT
CTGCGCGGTGGTAACCATGGGCAACACTGTAGATCACGACCTCTAGTGGTGACGCATATC
CGACCAGACTCACCCGCAGCAAAAGAAGGAACATTGAAGACGGGAGATCGAATTGTGTCG
GTCGGATCCACTCCTCTCATCAGTTCCACCCTCCCGGAGGCCATCGCGGAGCTGCAGGGA
TGTGGGGAGGAGGCGGTACTTACTATCGAGTACGATGTTTCTGTCATGGATGCAGTAGCG
AACGCTTCAGGCCCCCTCTTGGTAGAGGTATCAAAAGACCCTGGGGCAGAATTGGGGATT
ACCCTCGCCAAATCAACTTATCGCAAGAAGCCGGTGATTTGTATCGACCGGGTGAAGCCA
GCGAGCATATCCGACAGATGCGGAGCGCTTCACATCGGAGATCAGATACTTTCCATCGAC
AACATATCGATGGCGACCTCTAGTGTGAGGGAGGCGTCGGATCTCCTCCAATCCTCCTCG
GATCAGGTGAAGTTGGAGATTCACCCGGTGTCGCATCTCGCCATCGCCGCCTCCCCCTTC
GCTCCACTCACGTCCTCACAGGAGCAAAGGGTGTTTAATGCATTTTCGTTGTCGCACGCC
AGCGTACCGAACAGACACCCCGTGCAGTTCCGAACCGCTGTGACTTCATTACTTCCACTG
TCAACCACCATCACCATTATGGTGAAAGCACCTATGGTGGCTGCTGGTAGGAATGCAAAC
AGAATTAAACTTCATTCTTTATCTTTTACTATGCACGGGAATCCCCCTAATACCCCATGG
TCCCCTATTTCACCCCAGTTTACCCCGAGATGTCATCCACCCAAGAACGCTTCCTGGCCG
CATATGGGACTGTCCCTAGCGTCGGCCGACTACCTGAGCAACAACCAGGTCGTCCACACG
GAGGTGACAGAGGTTCAACTCCTCGCCTCTGATGACATCATCGACCCGATGACATCATCA
GCGCTCCCAAACTTCGGGATGCAGCTCCAGGGAGGAATCTTCTCCACAGAAGTGCTCACC
TCCCCTCCTTTCATCAGTTTCATTGAACCCGATCGACCTGCTGATAGATGTGGTGTGCTG
CAGAGTGGAGATCGCTTGATGTCGGTGAATGGATATCCATGTGAGGATTGCACACTGGAT
GAGGTGGCGCAGATGCTGGGCGATGCTTATCTGTCTGGAGCTGTGACAATAAATAGGAAT
TTTAAAATCGAACCTAAGGATTTCTGCTTCAAATTAAGAATTATGATTACCAATGTGCAA
GCTTCAACATTGGGTTATGTGGAAACCCGGCTAAATATTACTGAAAAATATTGCTGCGAT
TTGATGTGTTTACCACTTCATGTATGCAATGCATTGATATCTTTGTTGATTAACCCCATC
TCACCCACAGACGAGGGTGAAAGAGGGTTCATCTCGTATACCGTGGAGCTCAAGCGGCAT
GGGGGACCCCTTGGTATCACCATATCCGGGACCGAGGAAGCATTTGACCCCATCATTATA
TCGGGGCTTACCCCTGGAGGACTTGCTGATAGGTGGGTGAGGTTTTATATTGGGGGGTTA
CCCCTGGAGGACTTGCCGATAGGTGGTTCGTTTTTACACATAATCCCTATTGTTACATCA
CAGAGCGAGCCGATAACAGAGCTGAGCGATCCTGAGGACGACATCCTACCTCCCCCCATG
GGCCCCCTACCCAACCACACCCCCACCGACCCCCCCTCGGACCCCCTACACCGGTTAAAA
GGCCGAGGGGTGAGGCCGGGACCAGCGGGGGCTGCGAGTGTGGACAGCGCGGTGGATTCA
TGGGGTGACAGTGACGCGTATCGAACCAGGAGTAGCACAGGTGGCCGGGACATCTCGCAC
GTATTCCGACACTTGGGGGACACGCGCCCATATTCGGTCGCGAACCAACCGATCCCCAGA
GCGAAGGTGAGTTTGAAACGTCGTTCAATTCCCCACCCCACCACTAACCCCCCTCCCCAC
GCAGCTACAAACCCCCCGGCACCTGCACCTCCGGTCGCCGAATGGCAACGAGCACTCGAC
GATCTGCAGTCGGTCGGCCAGTCATCCGGATATCTACACGACCTTGAGTCGAAACTGACG
ATCGGCTCGGAAGCTCTCGGACGTCACCCAGTGTACAACCATCGACGACGAGCGGTCGCC
AAAAATTCCGCGTCCCCGAGTTTGCCTCTCCGTTTTCACCGCGTGACGATTGAAATGAAA
CTTTCTCCGCAGTTGACTTTGTTCAAGGAAAGTTTGAACGAGGATTTCGGTTTCTCTCTC
TCGGACGGACAGATTGAGCCCGGCGTGTTCGTGCACACCGTGCGCCATGGCGGACCGGCG
CACAGGTGCGGCCTCCTGCCATTTGACCGCTTGCTCCAGGTGAACGGCACCACCCTGCAT
GACTCCGATTGTACCCGAGCCATTCCTGTCGTATCGGGCGCCCGCGAGCGACTGGACGTC
CTCGTGTCTCGCCACCCG
| PANTHER |
GRIP2 (IPR030029) - T[1-523] 1.5E-203 - T[584-638] 1.5E-203 - T[806-946] 1.5E-203 |
| ProSiteProfiles |
PDZ (IPR001478) - T[8-91] 15.642 - T[107-193] 16.787 - T[207-291] 15.843 - T[424-506] 12.064 - T[864-946] 14.496 |
| SUPERFAMILY |
PDZ_sf (IPR036034) - T[8-92] 3.81E-15 - T[89-195] 8.94E-21 - T[192-289] 7.62E-18 - T[440-517] 1.58E-15 - T[574-632] 2.16E-5 - T[865-945] 5.52E-16 |
| Pfam |
PDZ (IPR001478) - T[10-88] 1.8E-10 - T[110-189] 2.6E-11 - T[208-287] 2.5E-9 - T[445-506] 5.2E-7 - T[865-942] 2.0E-7 |
| SMART |
PDZ (IPR001478) - T[17-91] 2.1E-9 - T[115-193] 1.6E-16 - T[216-291] 1.4E-12 - T[443-521] 4.2E-11 - T[874-946] 1.6E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GRIP1_HUMAN | 39.061 % | 607 | 0 |
| GRIP2_HUMAN | 40.23 % | 574 | 0 |