Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 543

>Cisavi.CG.ENS81.R26.1230151-1236766.13806.p
MQPPIILLKEGTDSSQGIPQLVSNINACQVISEAIRTTLGPRGMDKLIVDNRGKATISND
GATILKLLDVVHPAAKTLVDISKSQDSEVGDGTTTVTLLAAELLKQAKCFVEDGVHPQLI
VRAYRQATNLAIQKIKEIQVKIKTSDPKEQRGLLEKCAATALNSKLIASYKDLFAPMVVD
AVMLLDDLLPLKMIGIKKISGGALEESKLVSGVAFKKTFSYAGFEMQRKKYKNPKIVLLN
VELELKSEKENAEVRVNNVEDYQEIVDAEWQILYDKMKHICDSGAQVVLSKLPIGDVATQ
YFADRDMFCAGRVVEQDLKRTMMACGGSIQTSVQHLTDDVLGTCEVFEEEQVGGERFNFF
RGCPHAKTCTILLRGGAEQFMEETERSLHDAIMIVRRAIKNDAVVAGGGAIEMEISKHLR
SHARTIRGKQQLIISAYGKALEIIARQLCENAGFDATNILNKLRQVHATEDGKWFGVDIN
NEDITDNFAACVWEPSIVKINALTAAAEAACLILSVDETVKNPRSGQGDQAGPPAGRGRG
RPR

Nucleotide sequence

Length: 1,915

>Cisavi.CG.ENS81.R26.1230151-1236766.13806.t
CTGGGCATGTGTTTTTAAATTTATTCGTTACCGTCGCGATTGTTTGGTTTTGTATTAAGG
AAATTTCAAAACGATTAAACAGTTTAATCGGATTATTATTCATATAAAAGTTTTAAAATG
CAACCTCCAATTATTCTGTTGAAAGAAGGGACTGACAGTTCGCAAGGTATTCCACAACTT
GTAAGCAACATCAATGCATGTCAAGTTATCTCCGAAGCAATTCGTACGACACTTGGACCC
CGGGGGATGGACAAGCTTATTGTGGATAATAGAGGAAAAGCTACAATCTCGAACGATGGA
GCTACAATTTTAAAACTATTAGATGTCGTCCACCCGGCTGCCAAAACTTTAGTTGATATT
TCAAAGTCCCAGGATTCGGAGGTGGGAGATGGTACCACCACAGTTACACTACTTGCTGCT
GAATTATTAAAACAAGCAAAGTGTTTTGTAGAGGATGGTGTTCATCCACAGCTGATAGTA
AGAGCATACCGGCAAGCCACCAATCTTGCTATACAGAAGATCAAGGAAATACAAGTGAAG
ATCAAAACCAGTGACCCGAAAGAACAGCGAGGGTTGTTAGAGAAGTGCGCTGCCACAGCT
CTCAACTCAAAGTTGATCGCATCCTACAAAGATCTATTTGCTCCAATGGTGGTTGATGCT
GTGATGTTATTGGATGACCTTCTTCCTCTGAAAATGATCGGAATTAAGAAAATATCAGGA
GGAGCACTTGAGGAATCGAAACTTGTCTCCGGAGTGGCGTTCAAGAAAACTTTCTCCTAC
GCTGGTTTCGAAATGCAAAGGAAGAAATACAAGAATCCCAAGATAGTTCTGCTTAACGTG
GAGCTTGAGTTAAAATCGGAGAAAGAAAATGCTGAAGTCCGAGTCAATAATGTTGAGGAC
TATCAAGAGATTGTGGATGCAGAATGGCAGATTCTCTATGATAAAATGAAGCATATTTGT
GACAGTGGTGCACAGGTTGTACTGAGCAAGCTCCCAATCGGAGATGTGGCCACTCAATAT
TTCGCCGACCGAGATATGTTCTGTGCTGGTCGTGTGGTGGAGCAAGACCTCAAGAGAACA
ATGATGGCCTGTGGAGGTAGCATACAGACAAGTGTGCAGCATCTCACTGATGATGTGTTG
GGAACTTGTGAAGTGTTTGAGGAGGAACAAGTGGGTGGGGAGAGGTTTAATTTCTTCCGT
GGTTGCCCACATGCGAAGACTTGCACAATCTTGTTACGTGGAGGTGCGGAACAGTTTATG
GAGGAAACTGAACGCTCGCTCCACGATGCTATTATGATCGTACGAAGAGCTATCAAGAAT
GATGCAGTTGTAGCAGGTGGTGGTGCAATAGAAATGGAAATCAGTAAACACCTTCGTAGC
CATGCACGCACTATTAGAGGAAAACAACAGCTTATTATTTCAGCTTATGGCAAGGCATTG
GAGATTATTGCACGTCAATTATGTGAGAATGCTGGATTCGATGCAACCAATATTCTCAAC
AAATTAAGACAAGTTCATGCAACAGAAGATGGAAAATGGTTTGGTGTTGACATCAACAAT
GAAGATATCACCGATAACTTTGCTGCTTGCGTCTGGGAACCATCCATTGTTAAGATCAAT
GCGTTGACTGCAGCTGCTGAAGCTGCATGCTTGATTTTATCTGTTGATGAAACAGTTAAG
AACCCACGATCTGGACAAGGAGACCAAGCTGGGCCACCAGCGGGGCGTGGAAGGGGTCGT
CCTCGTTAATATGATGTTTTCTAATTGCATGAATGTAACTGGACACAATATTGCTGTTCC
TATATACCGCATGAACTTCTTTGGCAAGGTTATCTAAATTATCAAAGCACACAACGTTTG
CGTCGTATACACTACACGGTTTTGCGTGGAATAAATGTATCTTTTTGAGTCTTGA

InterProScan

TIGRFAM	Chap_CCT_eta (IPR012720) - T[2-525] 2.9E-269
CDD	Chap_CCT_eta (IPR012720) - T[4-525] 0.0
PANTHER	Cpn60/TCP-1 (IPR002423) - T[10-526] 3.1E-215
PANTHER	Chap_CCT_eta (IPR012720) - T[10-526] 3.1E-215
SUPERFAMILY	GROEL-like_equatorial_sf (IPR027413) - T[15-142] 1.44E-86 - T[402-522] 1.44E-86
Gene3D	GROEL-like_equatorial_sf (IPR027413) - T[24-142] 1.1E-184 - T[403-520] 1.1E-184
Pfam	Cpn60/TCP-1 (IPR002423) - T[31-522] 1.1E-158
PRINTS	Chaperone_TCP-1 (IPR017998) - T[33-49] 3.9E-32 - T[55-73] 3.9E-32 - T[85-104] 3.9E-32 - T[370-392] 3.9E-32 - T[404-416] 3.9E-32
ProSitePatterns	Chaperonin_TCP-1_CS (IPR002194) - T[36-48] . - T[57-73] . - T[85-93] .
Gene3D	TCP-1-like_intermed_sf (IPR027410) - T[143-211] 1.1E-184 - T[367-402] 1.1E-184
SUPERFAMILY	TCP-1-like_intermed_sf (IPR027410) - T[150-210] 5.49E-27 - T[365-401] 5.49E-27
SUPERFAMILY	GroEL-like_apical_dom_sf (IPR027409) - T[206-375] 8.89E-49
Gene3D	GroEL-like_apical_dom_sf (IPR027409) - T[212-366] 1.1E-184