- Transcript 'KH2012:KH.C4.420.v1....' >
- Transcript 'KH2012:KH.C2.141.v2....' >
- Transcript 'KH2012:KH.L30.5.v1.C...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Cisavi.CG.ENS81.R26....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R26.1230151-1236766.13807.t
Possible name(s)
CCT3; CCT7; TCP1
Gene model
Location
R26 [1,230,316 / 1,236,719]
Amino acid sequence
Length: 480
>Cisavi.CG.ENS81.R26.1230151-1236766.13807.p
MQPPIILLKEGTDSSQGIPQLVSNINACQVISEAIRTTLGPRGMDKLIVDNRGKATISND
GATILKLLDVVHPAAKTLVDISKSQDSEVGDGTTTVTLLAAELLKQAKCFVEDGVHPQLI
VRAYRQATNLAIQKIKEIQVKIKTSDPKEQRGLLEKCAATALNSKLIASYKDLFAPMVVD
AVMLLDDLLPLKMIGIKKISGGALEESKLVSGVAFKKTFSYAGFEMQRKKYKNPKIVLLN
VELELKSEKENAEVRVNNVEACGGSIQTSVQHLTDDVLGTCEVFEEEQVGGERFNFFRGC
PHAKTCTILLRGGAEQFMEETERSLHDAIMIVRRAIKNDAVVAGGGAIEMEISKHLRSHA
RTIRGKQQLIISAYGKALEIIARQLCENAGFDATNILNKLRQVHATEDGKWFGVDINNED
ITDNFAACVWEPSIVKINALTAAAEAACLILSVDETVKNPRSGQGDQAGPPAGRGRGRPR
Nucleotide sequence
Length: 1,513
>Cisavi.CG.ENS81.R26.1230151-1236766.13807.t
TTTTGTATTAAGGAAATTTCAAAACGATTAAACAGTTTAATCGGATTATTATTCATATAA
AAGTTTTAAAATGCAACCTCCAATTATTCTGTTGAAAGAAGGGACTGACAGTTCGCAAGG
TATTCCACAACTTGTAAGCAACATCAATGCATGTCAAGTTATCTCCGAAGCAATTCGTAC
GACACTTGGACCCCGGGGGATGGACAAGCTTATTGTGGATAATAGAGGAAAAGCTACAAT
CTCGAACGATGGAGCTACAATTTTAAAACTATTAGATGTCGTCCACCCGGCTGCCAAAAC
TTTAGTTGATATTTCAAAGTCCCAGGATTCGGAGGTGGGAGATGGTACCACCACAGTTAC
ACTACTTGCTGCTGAATTATTAAAACAAGCAAAGTGTTTTGTAGAGGATGGTGTTCATCC
ACAGCTGATAGTAAGAGCATACCGGCAAGCCACCAATCTTGCTATACAGAAGATCAAGGA
AATACAAGTGAAGATCAAAACCAGTGACCCGAAAGAACAGCGAGGGTTGTTAGAGAAGTG
CGCTGCCACAGCTCTCAACTCAAAGTTGATCGCATCCTACAAAGATCTATTTGCTCCAAT
GGTGGTTGATGCTGTGATGTTATTGGATGACCTTCTTCCTCTGAAAATGATCGGAATTAA
GAAAATATCAGGAGGAGCACTTGAGGAATCGAAACTTGTCTCCGGAGTGGCGTTCAAGAA
AACTTTCTCCTACGCTGGTTTCGAAATGCAAAGGAAGAAATACAAGAATCCCAAGATAGT
TCTGCTTAACGTGGAGCTTGAGTTAAAATCGGAGAAAGAAAATGCTGAAGTCCGAGTCAA
TAATGTTGAGGCCTGTGGAGGTAGCATACAGACAAGTGTGCAGCATCTCACTGATGATGT
GTTGGGAACTTGTGAAGTGTTTGAGGAGGAACAAGTGGGTGGGGAGAGGTTTAATTTCTT
CCGTGGTTGCCCACATGCGAAGACTTGCACAATCTTGTTACGTGGAGGTGCGGAACAGTT
TATGGAGGAAACTGAACGCTCGCTCCACGATGCTATTATGATCGTACGAAGAGCTATCAA
GAATGATGCAGTTGTAGCAGGTGGTGGTGCAATAGAAATGGAAATCAGTAAACACCTTCG
TAGCCATGCACGCACTATTAGAGGAAAACAACAGCTTATTATTTCAGCTTATGGCAAGGC
ATTGGAGATTATTGCACGTCAATTATGTGAGAATGCTGGATTCGATGCAACCAATATTCT
CAACAAATTAAGACAAGTTCATGCAACAGAAGATGGAAAATGGTTTGGTGTTGACATCAA
CAATGAAGATATCACCGATAACTTTGCTGCTTGCGTCTGGGAACCATCCATTGTTAAGAT
CAATGCGTTGACTGCAGCTGCTGAAGCTGCATGCTTGATTTTATCTGTTGATGAAACAGT
TAAGAACCCACGATCTGGACAAGGAGACCAAGCTGGGCCACCAGCGGGGCGTGGAAGGGG
TCGTCCTCGTTAA
| CDD |
Chap_CCT_eta (IPR012720) - T[4-462] 0.0 |
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[10-260] 1.4E-178 - T[260-463] 1.4E-178 |
| PANTHER |
Chap_CCT_eta (IPR012720) - T[10-260] 1.4E-178 - T[260-463] 1.4E-178 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[15-142] 9.94E-87 - T[339-459] 9.94E-87 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[24-142] 1.7E-81 - T[340-457] 5.3E-76 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[31-260] 8.1E-71 - T[260-459] 3.9E-65 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[33-49] 1.8E-19 - T[55-73] 1.8E-19 - T[85-104] 1.8E-19 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[36-48] . - T[57-73] . - T[85-93] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[143-211] 1.7E-81 - T[304-339] 5.3E-76 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[150-210] 3.66E-27 - T[302-338] 3.66E-27 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[206-312] 8.11E-24 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[212-259] 1.7E-81 - T[260-303] 5.3E-76 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPA_HUMAN | 31.657 % | 242 | 8.68E-74 |
| TCPH_HUMAN | 79.231 % | 418 | 5.71E-142 |
| TCPE_HUMAN | 30.057 % | 216 | 5.2E-64 |