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TRANSCRIPT CARD

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  1. Clone 'citb016e03' > 
  2. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  3. Transcript 'Cisavi.CG.ENS81.R27....' > 
  4. Transcript 'Cisavi.CG.ENS81.R26....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R26.889087-893590.10905.t

Possible name(s)

COL7A1; PTPRF; PTPRJ

Gene model

Cisavi.CG.ENS81.R26.889087-893590

Location

R26 [889,086 / 893,590]

Sequences

Amino acid sequence

Length: 174

>Cisavi.CG.ENS81.R26.889087-893590.10905.p
MKQVFVTLLAILAAVNAQDILPAPTDLQAVVRSNAVGLTWTAVEGDVVSYLATIMEIGQS
MTTTETRAAFGGLTAMTTYTASVVANGGNESLGFPAFVQFQTLAEKPTNLQNVFEETTET
MLVISWDMVNGTSGYSVEVATTSGEIISASVDVQGNKAYISGLSPFTFYDLSIR

Nucleotide sequence

Length: 1,154

>Cisavi.CG.ENS81.R26.889087-893590.10905.t
AAAATCAATCAAAATGAAACAGGTATTTGTAACTTTGTTGGCCATCTTGGCTGCAGTGAA
TGCACAAGACATTCTTCCCGCACCCACCGACCTACAGGCTGTTGTTCGATCTAACGCAGT
CGGGTTGACATGGACGGCAGTTGAAGGGGACGTGGTGTCCTATTTGGCCACAATTATGGA
AATCGGCCAGTCTATGACAACAACGGAAACAAGAGCCGCGTTTGGAGGGCTAACTGCGAT
GACCACTTACACTGCCAGCGTCGTGGCTAACGGTGGCAACGAGTCTCTTGGATTTCCAGC
TTTCGTTCAATTCCAAACATTGGCAGAGAAGCCGACTAACTTGCAGAACGTTTTCGAGGA
AACAACTGAAACAATGCTTGTTATCTCGTGGGACATGGTCAATGGCACATCTGGATATTC
GGTGGAAGTGGCTACCACCTCAGGAGAGATCATTTCTGCCTCTGTTGATGTACAAGGCAA
CAAGGCTTACATCAGCGGGTTAAGTCCGTTTACTTTCTACGACCTCTCAATCCGGTAACA
TCACTGTTGATTTCAATCCTTCAGTTGCACCACTGGCTGCTGATATCCCAGAAGATACTC
CTCTCGAGATCCAAACATCAAACTGGGGCCCCGGTGGTATGGTGCAAGTGAAGTTGGGCT
CTACTTACATGGACCCTGGAAATCCAAACGCTGACAACATGGAAGGAACTCTTGTTGCCA
AACCAGTCCAAGGAACTTACGTGATTGTCATCGACACCGGAGCCGGTTGCCCTGAAGGAA
TCACTGTACAGAATATTTGGGAAATGGACCAAGTGGTAAATTTAATGGATACTGAAAATC
CTAACATCATGTACTTCATACAACGCGTTGATCAATGGTACAGCAACAACATCGGTTTCA
TATTCAGTGCTGCATGTAGCGATCGAAGCGGACTTACAGCTGTTCTATCAAAAGATCCAT
CTTTGATTGCTGTCGCCTTTAATTAATTCAATCTCAAAGTTAAATATATATAGGGTTTTT
GTAATCAGTGTCATGACGATCAAATTTATTTAGCTACTTATTTGATCCAAAACTAAATCA
TGCTATCATTTACCTACTACCTACTAGATATCGAACTATCGCAATAAACCAAAGTGAACA
CCTAGTAAAAAAAA

InterProScan

Gene3D
Ig-like_fold (IPR013783) - T[16-103] 1.0E-7 - T[104-174] 3.9E-8
SMART
FN3_dom (IPR003961) - T[21-91] 0.0092
CDD
FN3_dom (IPR003961) - T[22-91] 0.00195734 - T[105-174] 0.00684562
ProSiteProfiles
FN3_dom (IPR003961) - T[23-105] 7.929 - T[106-174] 11.219
SUPERFAMILY
FN3_sf (IPR036116) - T[24-174] 3.65E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value