- Transcript 'KH2012:KH.C3.101.v2....' >
- Transcript 'KH2012:KH.C10.73.v2....' >
- Transcript 'KH2012:KH.S437.6.v2....' >
- Transcript 'KH2012:KH.L87.20.v1....' >
- Transcript 'Cisavi.CG.ENS81.R27....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R27.2272492-2275882.19064.t
Possible name(s)
FUCA1; FUCA2
Gene model
Location
R27 [2,272,500 / 2,275,882]
Amino acid sequence
Length: 378
>Cisavi.CG.ENS81.R27.2272492-2275882.19064.p
MKNNYPPDFTYPDFARQFTAELFQPNNWADLFKNAGAQYVVLTSKHHEGFTNWPSNVSWN
WNSMDVGPHRDLVGELASSIRTRTKLKFGVYHSLFEWFNPQYVKDKASNFKSKSFVNSKT
MPELYELVNKYKPDIVWSDGDFGPDVYWNSTEFLAWLYNNSPVKDHVVTNDRWGTGIRCH
HGGFYSCSDRYSPGVLQPHKWENCMTIDRYSWGYRRNANIQDFLTIEEIIATFASTISCG
GNMLMNVGPTKYGMIAPVFQDRLMEFGSWLKVNGEAVYFSTPWRAQNDSVTPKIWYTQKS
LAVYAFVLAWPSDNMLELGSPVVTSSSTVSMLGWNGPSIEWHQKSVQTNKGIIIALPNVP
AVKLPCKWAWVLKLENFT
Nucleotide sequence
Length: 1,574
>Cisavi.CG.ENS81.R27.2272492-2275882.19064.t
GTTAGGCTTAAGATATCTCTCTTTACTTGTTCTGTTGTGTGGAGGCTTTTCTAATGCATA
TGAACAAAGGGAAGTTACTAGAGATGTCGAACTTAAAATAGATGACAAAGAAAGCCCTTT
AACACCACTGGAAAATAGTCCTCAATCTGAAAATACCAAAAGATACGAACCAAATTGGGC
TTCAATTGATTCCAGACCATTGCCACAATGGTTTGACCAAGCAAAATTTGGAATCTTTCT
TCATTGGGGTGTTTTTTCAGTGCCCAGCTTTGGCAATGAATGGTTTTGGTGGAACTGGAA
GGGAACTAAAAACCAGGCTGTAGTGGACTTTATGAAAAACAACTATCCACCAGATTTCAC
TTACCCCGATTTTGCAAGACAGTTCACTGCTGAACTATTCCAACCAAACAATTGGGCTGA
TTTGTTTAAAAATGCTGGAGCTCAATATGTAGTTCTCACAAGCAAGCATCATGAAGGCTT
CACAAATTGGCCGTCAAATGTCTCCTGGAACTGGAACTCTATGGATGTTGGGCCACATCG
AGATTTAGTTGGGGAGTTAGCTTCTTCAATAAGGACTCGAACAAAACTAAAATTCGGTGT
CTACCATTCACTTTTTGAGTGGTTTAACCCACAATATGTCAAAGACAAAGCATCCAATTT
TAAAAGCAAGAGTTTTGTGAATTCGAAAACAATGCCAGAGTTGTATGAACTTGTAAACAA
ATACAAACCAGATATAGTTTGGTCTGATGGAGACTTTGGGCCTGATGTCTATTGGAATTC
TACTGAATTTCTTGCGTGGTTGTATAATAATAGCCCAGTGAAGGACCATGTCGTTACTAA
TGATCGGTGGGGGACTGGCATTCGGTGCCATCATGGAGGGTTCTATTCATGTTCGGACCG
ATACAGTCCTGGGGTGTTGCAACCACACAAATGGGAGAACTGCATGACCATCGACCGATA
TTCTTGGGGTTACAGGAGGAATGCAAACATCCAGGACTTTTTAACAATTGAAGAGATTAT
AGCTACATTTGCTTCCACCATCAGCTGTGGGGGCAATATGCTGATGAATGTCGGTCCCAC
CAAGTATGGAATGATCGCTCCAGTGTTCCAGGACAGATTAATGGAGTTTGGAAGTTGGCT
CAAAGTTAATGGGGAAGCGGTATACTTTAGCACACCATGGAGGGCTCAGAATGATAGCGT
GACACCGAAGATTTGGTATACACAGAAATCATTGGCTGTTTATGCATTTGTGCTGGCCTG
GCCATCTGACAACATGTTGGAGTTGGGTTCTCCTGTTGTTACATCAAGTTCTACAGTTTC
AATGTTGGGATGGAATGGTCCTTCTATTGAGTGGCACCAAAAGTCAGTACAAACAAACAA
AGGAATTATCATTGCCTTGCCAAATGTACCAGCAGTTAAACTACCATGTAAATGGGCATG
GGTTCTCAAACTTGAAAATTTCACATGAAAATGGCTTCAACTTTCTGATTAATTTGCTGT
ATTTTTTAAATCATTTTCTATATCTTTTTTTAAATCCTGTAAAATAATAAATGTCTTTGA
CAAACTTGTAGAAA
| Pfam |
Glyco_hydro_29 (IPR000933) - T[1-275] 5.8E-94 |
| SMART |
Glyco_hydro_29 (IPR000933) - T[1-321] 1.8E-167 |
| PANTHER |
Glyco_hydro_29 (IPR000933) - T[1-376] 1.2E-178 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[1-278] 2.32E-93 |
| PIRSF |
FUC_metazoa-typ (IPR016286) - T[1-375] 7.3E-102 |
| PRINTS |
FUC_metazoa-typ (IPR016286) - T[39-55] 7.0E-58 - T[58-76] 7.0E-58 - T[126-142] 7.0E-58 - T[153-174] 7.0E-58 - T[228-249] 7.0E-58 - T[261-283] 7.0E-58 |
| ProSitePatterns |
Glyco_hydro_29_CS (IPR018526) - T[193-204] . |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[274-377] 5.5E-13 |
| Pfam |
Fucosidase_C (IPR031919) - T[286-375] 2.8E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUCO2_HUMAN | 58.158 % | 467 | 5.84E-164 |
| FUCO_HUMAN | 56.533 % | 464 | 4.9E-163 |