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  1. Transcript 'KH2012:KH.L170.28.v5...'
  2. Transcript 'KH2012:KH.L69.1.v1.A...'
  3. Transcript 'Cisavi.CG.ENS81.R72....'
  4. Transcript 'Boleac.CG.SB_v3.S264...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S264.g06267.01.t

Possible name(s)

SNAI1; SNAI2; SNAI3

Location

S264 [75,667 / 78,338]

Sequences

Amino acid sequence

Length: 483

>Boleac.CG.SB_v3.S264.g06267.01.p
MRLSRSGSSPDEGIGLNGDSCRRKSFISRSVEVQDKPIDLSFKKWKNKNSVKCKIEKDDD
YDEIPATKTKNYPKQRQNCTVDSTLSPSVYHRSSSQEDPNSRTISEYHTALQNPIPSPYL
PWALAQPPGRLPYPPTVMGSLLHPALIMSQGVRQTSPGFSPYTLHMPPTIGPAFPTTDAF
NRLYNQKVLAELSRLYAQTSGLYGPKHTGGDAMTSINGRKDPLSARMQAIALREDPEDKS
AEGKYDVGFHVKKEVFSPQKLPLPVPRKRKLNEDSAAAHMFHPQPKTNSPFRLGNTADFG
TRYFNEATSFIGSSPTMVPKQTAISSGNGSTNSKPVDFKPCRYPCVECGRTYATYGGLMK
HEKSHRDPEPNNNFNCKTCSKEYNSLGALKMHIRTHTLPCKCHICGKAFSRTWLLQGHIR
THTGEKPYECTICKRAFADRSNLRAHMQTHESVKRYGCTNCDKTFSRISLLSRHQTSGCA
EKS

Nucleotide sequence

Length: 1,452

>Boleac.CG.SB_v3.S264.g06267.01.t
ATGCGTTTGTCGAGATCGGGCTCGAGTCCTGATGAAGGAATCGGACTCAATGGAGACTCA
TGTAGAAGAAAGTCTTTCATAAGTCGATCGGTTGAAGTGCAAGATAAACCTATTGATTTA
TCGTTTAAAAAATGGAAAAACAAGAACTCGGTTAAATGTAAAATAGAAAAAGATGACGAT
TATGATGAAATTCCAGCAACCAAAACGAAAAATTATCCAAAACAAAGACAAAACTGTACC
GTTGACTCTACGCTTTCACCTTCCGTATACCATAGGTCTTCCTCTCAAGAAGATCCTAAT
TCACGGACAATCTCAGAATATCACACTGCCTTGCAAAATCCCATACCCTCTCCATATTTA
CCATGGGCCTTAGCTCAACCTCCTGGAAGACTACCGTACCCTCCAACAGTCATGGGCTCC
TTATTGCATCCTGCTTTGATTATGTCACAAGGAGTAAGACAGACGTCGCCTGGATTTTCT
CCTTATACGCTTCATATGCCGCCAACTATTGGCCCGGCTTTTCCTACGACAGATGCTTTC
AATCGTTTGTATAATCAGAAAGTATTGGCTGAACTTTCTCGCCTATACGCCCAAACCAGT
GGTTTATACGGCCCGAAACATACTGGTGGTGATGCAATGACCAGTATCAATGGTAGAAAA
GATCCGTTGTCAGCGAGAATGCAGGCGATTGCTCTCCGTGAGGATCCCGAGGACAAAAGT
GCAGAGGGTAAATATGACGTCGGGTTTCATGTCAAAAAGGAAGTTTTTTCGCCACAGAAA
CTGCCACTTCCAGTTCCTAGAAAACGGAAATTGAACGAAGATTCCGCAGCAGCCCATATG
TTTCATCCTCAACCCAAAACAAACAGCCCTTTCCGCCTCGGAAATACAGCAGATTTTGGA
ACGAGATATTTCAACGAAGCAACATCTTTCATCGGTTCTTCTCCCACGATGGTACCAAAG
CAAACTGCCATTTCATCTGGAAACGGTTCGACAAACAGTAAGCCCGTGGATTTTAAACCA
TGCCGATACCCATGTGTGGAATGTGGACGGACATACGCCACGTATGGTGGGTTGATGAAA
CATGAAAAGAGTCATCGCGATCCAGAACCAAACAACAATTTCAATTGCAAGACCTGCAGT
AAAGAATATAACTCTCTTGGTGCGCTTAAAATGCACATACGGACGCACACGCTTCCTTGT
AAATGTCACATTTGCGGTAAAGCATTTTCTAGAACTTGGCTACTTCAAGGACATATTAGA
ACTCACACAGGTGAAAAGCCATACGAATGCACTATTTGTAAACGAGCGTTCGCTGACCGA
TCTAACCTGCGCGCACATATGCAAACTCATGAAAGTGTCAAGCGATATGGCTGCACCAAT
TGTGATAAAACATTCTCCAGGATCTCACTCCTCTCCCGTCACCAAACCAGTGGATGTGCC
GAAAAGTCATGA

InterProScan

SMART
Znf_C2H2_type (IPR013087) - T[343-365] 0.016 - T[374-396] 0.004 - T[400-422] 0.032 - T[428-450] 6.1E-5 - T[456-476] 49.0
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[343-370] 12.695 - T[374-397] 10.658 - T[400-427] 15.022 - T[428-455] 12.882 - T[456-483] 10.741
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[345-365] . - T[376-396] . - T[400-422] . - T[430-450] .
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[372-411] 6.88E-8 - T[399-450] 4.54E-17 - T[436-478] 1.1E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNAI1_HUMAN 60.87 % 182 4.52E-54
SNAI3_HUMAN 64.964 % 195 7.78E-59
SNAI2_HUMAN 67.391 % 207 1.1E-63





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