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TRANSCRIPT CARD

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  1. Clone 'cilv040i21'
  2. Transcript 'KH2012:KH.L170.28.v2...'
  3. Transcript 'Cisavi.CG.ENS81.R27....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R27.70826-76995.12656.t

Possible name(s)

MDH1; MDH1B

Location

R27 [70,825 / 76,995]

Sequences

Amino acid sequence

Length: 440

>Cisavi.CG.ENS81.R27.70826-76995.12656.p
MGGFNEFMEYAECYYGVTSNMMTDLMLKIKAENVSTKAMDIEKEKEFQSLSKPIHICIVN
GTNPVAYHLIPHLANGKIFGSEVEISIRLLDKPTAQVSLQGIQMEIEDLAYPLVRKIEVY
ENSRAAFQNASVIIFLETDAKDELTHLELLLQNHETYKRYAEEINEVALSNVKIILSGSG
TVNFNSHVLVEYGKNINKQNIVAMSKLQERRAQASLARKMQVSTAGVTNVVVWGNCANNA
PKSSYYIDVISAVVRKYDGAIWGPDWYSRALSELVYDKKWLTGDFVEEHATHNSELMNGL
RHHSSLSEAASLSCLLHDWIQGVESENVYSLGVESEGWYGVSGCVFSMPVRFKDGSYQVV
WDLELSDETKEKIKKIEVELKKDLRVAFKVEDHLENEVFSEDATLISSMMNQTESPSKTP
GEKLEVIREEDSEEQQEKTE

Nucleotide sequence

Length: 1,737

>Cisavi.CG.ENS81.R27.70826-76995.12656.t
ATTATTGTCTAAAGATAATGGCTAAATTTCGGTTATAACAGGTTCCTGTGAATGTCCATA
CTATGCCAAGTTAGAATTACTGGCAGATAAATTGGCTGGTAATCTGGATCATTTTCAGGT
TCACAAAATAGTGTTGCCAGCTGGAGAATGGGATGTATGGCTCAAGGAAACATGTGCCAA
GAACAGCTGGAAACACAGTAAAAGTCCGATAATTTGGAGGGAGTTAGTAGATAGAGGTGG
CAAAGGACTTTTAATGGGAGGTTTTAATGAGTTCATGGAATATGCTGAGTGTTATTATGG
AGTGACTTCTAACATGATGACAGATCTTATGCTGAAAATAAAAGCGGAAAATGTTTCAAC
CAAGGCAATGGATATTGAGAAGGAGAAAGAGTTTCAAAGTCTCAGCAAACCAATACATAT
TTGCATTGTAAATGGCACAAACCCTGTAGCTTATCATCTGATACCACATCTTGCAAATGG
AAAAATATTTGGCTCAGAGGTTGAAATATCAATTCGTCTCCTCGATAAACCAACGGCCCA
AGTTTCACTGCAAGGCATTCAAATGGAAATTGAAGACTTGGCGTATCCACTTGTGAGGAA
AATCGAGGTTTATGAAAACAGCCGAGCAGCATTTCAGAATGCATCGGTCATTATTTTCCT
TGAAACTGACGCAAAAGATGAACTAACCCACTTGGAGTTGCTCTTGCAAAACCATGAAAC
TTACAAGAGATATGCTGAAGAAATAAATGAAGTTGCCCTTTCTAATGTTAAGATTATTTT
ATCTGGAAGTGGAACTGTTAATTTCAACAGCCATGTCTTAGTGGAGTATGGGAAAAATAT
CAACAAACAAAACATTGTTGCCATGTCCAAACTGCAGGAGAGACGAGCCCAAGCATCACT
GGCTCGGAAGATGCAAGTGAGCACAGCTGGTGTCACGAATGTTGTAGTGTGGGGAAACTG
CGCAAACAATGCTCCGAAGAGCTCCTACTATATAGATGTCATATCAGCAGTTGTTCGTAA
ATATGATGGAGCTATTTGGGGGCCGGACTGGTATTCCAGAGCATTATCTGAGTTGGTGTA
TGATAAAAAGTGGCTCACAGGGGATTTTGTAGAAGAGCACGCCACCCACAACAGTGAGCT
GATGAACGGGCTGCGTCACCATTCTAGTCTGAGTGAAGCAGCATCATTATCGTGTTTGTT
ACATGATTGGATCCAAGGAGTCGAGAGTGAAAATGTTTATTCGCTTGGCGTGGAAAGTGA
AGGTTGGTATGGAGTTTCTGGCTGTGTGTTTTCAATGCCGGTTCGGTTCAAAGATGGTTC
CTATCAAGTAGTCTGGGACCTTGAACTGAGCGATGAAACAAAGGAAAAAATCAAGAAAAT
TGAAGTGGAATTGAAAAAGGATTTGCGAGTTGCTTTTAAGGTGGAAGATCATCTAGAGAA
TGAGGTGTTCTCTGAGGATGCTACTCTTATATCCTCGATGATGAACCAGACGGAATCCCC
GAGCAAAACTCCCGGAGAAAAACTCGAGGTCATTCGAGAAGAGGACTCTGAAGAGCAACA
AGAGAAGACGGAGTGATATTTTTATCGCTTGTTTTTGTATTCATTTTATCGTATTCCGTC
GCACTTAACCTGTTGATTGTGAAATTACATGTGTTTAACAGATAAACATTCTAGTTAAAG
TGTTACTCTTGCGGAAATCGTCACTTACCCTGGCTATTAAGGTAATCCCTGTAATTT

InterProScan

PANTHER
Malate_DH_type2 (IPR010945) - T[1-393] 1.4E-129
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[24-204] 4.17E-19
Pfam
Lactate/malate_DH_N (IPR001236) - T[63-201] 1.1E-7
Gene3D
Lactate_DH/Glyco_Ohase_4_C (IPR015955) - T[204-398] 1.4E-42
Pfam
Lactate/malate_DH_C (IPR022383) - T[206-389] 1.1E-12
SUPERFAMILY
Lactate_DH/Glyco_Ohase_4_C (IPR015955) - T[207-390] 3.24E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MDH1B_HUMAN 32.488 % 221 1.19E-66
MDHC_HUMAN 28.863 % 131 1.36E-34