Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 630

>Cisavi.CG.ENS81.R283.275384-287631.05272.p
MNSSGTATSYPMASLYVGDLHLDVTEAMLYEKFSAAGPVLSIRVCRDVITRRSLGYAFVN
FQQPADAERALDTMNYDPIKGRPIRIMWSLRDPYLRKSGVGNIFIKNLDKSIDNKALYDT
FSAFGNIFSCKVMLPDQNNGSKGYGFVHFETDEAGSRAIEKVNGMLLNDKKVYVGKFLTR
SERVKKMGERVRQFTNVYIKNFSDKLDEKALQVMFEQHGVVKSVAVMRDRDGNSRGFGFV
NMETHEDAEAACEALNGIQVEGTNDTLYVGRAQKKQERQQELRGQYEAQKQERIQRFQGV
NLYVKNLDDNVTDDELREAFSTYGTITSVKIMSDGKHSRGFGFVCLSSPEEATKAVTEMN
GRIVGTKQLYVALAKRREDRKAHLTAYDISHHPFIAAKPDNGPTIPTAGGASGYFMPFQG
AQRTYMQSQIIRATPRWQHNPRKLSGINQCNFLNTAAMSMPQVTTINTVISGVGQSKHCN
LNINISISKCIELVLKYIFASCFRIPAFKYNQSVRNPTMAGYPQSGKPQSQQQTDPAMQQ
AVHVQGQEPLTSSMLAAVQPQEQKQMLGERLYPLIEQSHPDLASKITGMLLEIDNSELLH
MLESRESLKAKVEEAVAVLQAHQEKVAAAT

Nucleotide sequence

Length: 1,890

>Cisavi.CG.ENS81.R283.275384-287631.05272.t
ATGAACAGCTCGGGAACAGCAACCAGTTATCCAATGGCTTCACTTTACGTGGGGGATTTG
CATCTTGACGTGACGGAGGCCATGTTGTACGAGAAGTTCTCAGCAGCTGGACCGGTGCTA
TCTATCCGAGTGTGCAGGGATGTTATAACTCGTCGATCGTTGGGTTACGCTTTTGTCAAC
TTTCAGCAGCCAGCTGATGCTGAGAGGGCATTGGACACTATGAATTATGACCCGATTAAA
GGACGTCCAATTCGTATTATGTGGAGCCTACGTGACCCATATCTTCGAAAATCTGGTGTT
GGCAACATATTCATCAAGAACTTGGATAAATCTATTGATAACAAGGCTCTATATGATACT
TTCTCAGCTTTTGGCAATATTTTCTCTTGCAAAGTGATGTTGCCAGATCAAAATAATGGT
TCGAAAGGATACGGCTTTGTTCATTTTGAGACCGACGAAGCTGGCTCCAGGGCTATTGAA
AAGGTGAACGGTATGTTGTTGAACGACAAGAAAGTTTATGTTGGAAAGTTTCTGACTCGC
TCGGAGCGAGTGAAAAAGATGGGAGAACGTGTTCGACAATTCACCAATGTCTACATTAAG
AACTTCTCGGACAAGCTTGATGAAAAGGCTTTACAAGTCATGTTCGAGCAACACGGGGTG
GTGAAGAGCGTTGCGGTGATGCGCGATCGGGACGGGAATTCCCGGGGGTTTGGGTTTGTA
AACATGGAAACCCATGAAGATGCTGAGGCGGCTTGTGAAGCATTGAATGGAATTCAAGTT
GAAGGTACAAACGACACATTATACGTTGGACGAGCGCAGAAGAAACAGGAGCGACAGCAA
GAGCTTCGTGGTCAATATGAAGCTCAGAAGCAAGAACGCATCCAACGATTCCAAGGTGTC
AACCTTTATGTGAAGAACTTAGATGACAATGTGACCGATGATGAGTTGCGTGAAGCTTTC
TCAACTTACGGGACGATCACCAGCGTCAAGATCATGTCTGATGGTAAGCATTCACGTGGG
TTTGGGTTCGTTTGCCTCAGTTCACCTGAAGAAGCCACAAAAGCCGTCACGGAAATGAAC
GGACGAATTGTTGGCACCAAACAGTTGTACGTGGCTCTTGCAAAACGCAGGGAGGATAGG
AAGGCACATCTAACAGCTTATGATATATCACACCATCCATTCATTGCAGCCAAACCAGAT
AATGGGCCAACCATTCCAACTGCCGGTGGCGCATCTGGTTATTTCATGCCATTCCAAGGA
GCCCAGCGAACCTACATGCAGAGTCAGATCATCCGTGCCACCCCAAGATGGCAGCATAAC
CCACGGAAGCTTTCTGGTATAAACCAGTGTAACTTTCTCAATACAGCTGCGATGTCCATG
CCCCAGGTAACCACCATCAACACCGTAATATCTGGAGTGGGACAATCAAAGCATTGCAAC
TTGAATATTAACATATCAATATCGAAATGCATTGAATTGGTTTTAAAATATATTTTTGCA
TCGTGTTTTCGCATACCTGCATTCAAGTACAACCAAAGTGTGCGCAACCCAACGATGGCT
GGATACCCACAATCTGGCAAACCTCAGTCCCAGCAACAGACCGACCCAGCCATGCAACAA
GCTGTTCATGTACAAGGACAGGAACCACTTACATCGAGCATGTTGGCTGCTGTACAACCT
CAAGAGCAAAAACAAATGCTGGGAGAAAGGTTGTACCCGTTGATTGAGCAGTCCCATCCC
GATCTTGCTTCGAAGATAACTGGAATGTTGCTGGAAATCGACAACTCTGAGCTTCTTCAC
ATGTTGGAGTCGCGCGAGTCGTTGAAAGCCAAGGTGGAGGAGGCAGTTGCTGTGCTGCAA
GCTCACCAGGAGAAAGTGGCGGCAGCTACA

InterProScan

Gene3D	Nucleotide-bd_a/b_plait_sf (IPR012677) - T[2-94] 2.7E-24 - T[95-183] 6.7E-21 - T[184-268] 1.3E-21 - T[269-386] 1.8E-29
SUPERFAMILY	RBD_domain_sf (IPR035979) - T[12-180] 6.25E-48 - T[194-377] 2.37E-44
TIGRFAM	PABP_1234 (IPR006515) - T[13-620] 4.6E-217
ProSiteProfiles	RRM_dom (IPR000504) - T[13-91] 17.523 - T[101-179] 16.244 - T[195-274] 17.216 - T[300-376] 19.11
SMART	RRM_dom (IPR000504) - T[14-87] 5.6E-22 - T[102-175] 4.6E-20 - T[196-270] 5.6E-22 - T[301-372] 5.3E-25
Pfam	RRM_dom (IPR000504) - T[15-85] 7.1E-20 - T[103-172] 5.2E-16 - T[197-264] 1.5E-17 - T[302-369] 2.4E-19
SMART	RRM_dom_euk (IPR003954) - T[102-175] 2.3 - T[196-268] 13.0 - T[301-372] 0.6
SUPERFAMILY	PABP-dom (IPR036053) - T[506-628] 4.19E-44
ProSiteProfiles	PABP_HYD (IPR002004) - T[547-624] 22.203
Pfam	PABP_HYD (IPR002004) - T[553-619] 1.3E-29
SMART	PABP_HYD (IPR002004) - T[559-622] 1.4E-38