- Transcript 'Cisavi.CG.ENS81.R283...' >
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- Transcript 'Cisavi.CG.ENS81.R283...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R283.275384-287631.05274.t
Possible name(s)
PABPC1; PABPC3; PABPC4
Gene model
Location
R283 [275,416 / 287,631]
Amino acid sequence
Length: 149
>Cisavi.CG.ENS81.R283.275384-287631.05274.p
MASLYVGDLHLDVTEAMLYEKFSAAGPVLSIRVCRDVITRRSLGYAFVNFQQPADAERAL
DTMNYDPIKGRPIRIMWSLRDPYLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNIFSCK
VSCNENGSKGYGFVHFETEEAGSRAIEKV
Nucleotide sequence
Length: 449
>Cisavi.CG.ENS81.R283.275384-287631.05274.t
ATGGCTTCACTTTACGTGGGGGATTTGCATCTTGACGTGACGGAGGCCATGTTGTACGAG
AAGTTCTCAGCAGCTGGACCGGTGCTATCTATCCGAGTGTGCAGGGATGTTATAACTCGT
CGATCGTTGGGTTACGCTTTTGTCAACTTTCAGCAGCCAGCTGATGCTGAGAGGGCATTG
GACACTATGAATTATGACCCGATTAAAGGACGTCCAATTCGTATTATGTGGAGCCTACGT
GACCCATATCTTCGAAAATCTGGTGTTGGCAACATATTCATCAAGAACTTGGATAAATCT
ATTGATAACAAGGCTCTATATGATACTTTCTCAGCTTTTGGCAATATTTTCTCTTGCAAA
GTGTCTTGTAATGAGAATGGTTCGAAAGGATACGGCTTTGTTCATTTTGAGACCGAGGAA
GCTGGCTCCAGAGCTATTGAAAAGGTTTA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[2-83] 5.5E-25 - T[84-142] 1.2E-20 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[2-80] 17.523 - T[90-149] 14.027 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[3-148] 4.08E-43 |
| SMART |
RRM_dom (IPR000504) - T[3-76] 5.6E-22 - T[91-148] 0.0016 |
| Pfam |
RRM_dom (IPR000504) - T[4-74] 5.2E-21 - T[92-148] 2.1E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PAP1M_HUMAN | 76.871 % | 251 | 1.88E-86 |
| PABP1_HUMAN | 87.919 % | 286 | 6.35E-95 |
| PABP4_HUMAN | 87.248 % | 281 | 6.43E-93 |