- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.L59.1.v1.B...' >
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- Molecular Tool 'Zinc Finger (C2H2)-8-MO' >
- Transcript 'Cisavi.CG.ENS81.R30....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R30.2929138-2932238.16754.t
Possible name(s)
TUBA1A; TUBA3C; TUBA3D
Gene model
Location
R30 [2,929,137 / 2,932,238]
Amino acid sequence
Length: 449
>Cisavi.CG.ENS81.R30.2929138-2932238.16754.p
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGCDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEIRTGTYRELFHPEQLITGKEDAANNYARGHYTVGKEHVDIVLD
RIRKLSDQCSGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTA
VVEPYNSVLTTHTTLEHSDCAFMVDNEATYDICRRNLDVERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIANIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGIDSVDEQEEDEEY
Nucleotide sequence
Length: 1,647
>Cisavi.CG.ENS81.R30.2929138-2932238.16754.t
AGATGACGCAATCCGAGCTACATATACTGAGTGGCAAGGGAATTTCGCCTCACTTTGCTT
GTACGAAACTCATAACGACATTCTACGGCAAACTAATTTTAGTCTTATTTTTTGAAGCAT
CTATAGTACATTGTCAAGAAGAAAGATGAGAGAATGCATTTCAATTCACGTTGGCCAAGC
CGGAGTTCAGATCGGCAACGCTTGCTGGGAGCTCTACTGTCTCGAGCATGGTATCCAACC
TGATGGTCAAATGCCAAGCGACAAAACAATTGGGGGGTGTGACGATTCGTTCAACACTTT
CTTCAGCGAGACTGGAGCTGGGAAACACGTCCCTCGAGCCGTTTTCGTCGATCTCGAACC
AACTGTTGTTGACGAAATTCGAACCGGCACATATCGCGAACTGTTTCATCCGGAACAGTT
GATCACTGGTAAGGAGGACGCCGCAAATAACTACGCTCGTGGACACTACACTGTTGGAAA
GGAACACGTTGACATTGTTCTTGATCGCATACGGAAGCTCTCCGATCAATGCAGTGGTCT
GCAGGGATTCCTCATTTTTCATTCATTTGGAGGAGGTACTGGGTCTGGCTTCACCTCGCT
ATTGATGGAAAGGCTTTCCGTCGACTATGGAAAGAAGTCCAAACTTGAATTTGCAATATA
CCCTGCACCCCAGATTTCCACAGCAGTTGTGGAGCCATACAATTCCGTTCTAACCACTCA
CACGACCCTGGAGCATTCAGATTGCGCTTTCATGGTCGATAACGAAGCAACTTACGACAT
TTGCCGTCGGAACTTGGATGTTGAACGTCCAACTTACACCAATTTGAACCGGTTAATTGG
GCAAATCGTTTCATCCATTACCGCCTCTCTGCGTTTTGATGGTGCATTAAACGTAGACCT
GACCGAGTTTCAAACCAACCTGGTTCCATACCCACGTATTCACTTCCCATTGGTCACTTA
CGCCCCAGTGATATCTGCTGAAAAAGCTTACCACGAGCAATTGTCGGTGTCAGAAATCAC
CAATGCGTGTTTCGAACCAGCCAATCAGATGGTGAAGTGCGATCCACGTCACGGAAAATA
CATGGCTTGCTGCCTCTTGTACAGAGGCGATGTTGTCCCCAAAGATGTCAATGCAGCGAT
TGCTAATATCAAAACAAAGAGAACTATTCAGTTCGTCGACTGGTGTCCAACTGGCTTCAA
GGTTGGTATTAACTACCAACCACCAACCGTTGTACCAGGAGGTGACTTGGCGAAAGTACA
ACGAGCAGTCTGTATGTTGAGCAACACCACTGCCATCGCTGAGGCATGGGCCCGTCTTGA
CCACAAGTTCGACTTGATGTACGCCAAGCGTGCGTTCGTCCACTGGTATGTCGGTGAGGG
AATGGAGGAAGGAGAATTCTCCGAAGCTCGTGAGGATCTCGCTGCTCTCGAGAAAGATTA
CGAAGAAGTCGGAATCGATTCGGTTGATGAACAGGAAGAAGATGAAGAATATTAAATGAT
CTTGTTTTTACCTTCTTCTCGAATTACTGGACTGTTCTTTCTCTATCATTCACTCTTCCT
AATATGATTTAAACTGATTTTAACAACAGCCCAAATTAACCATTTGAAACGTTAATGCAT
CGCTAATAAATTTCTTTGAAACCAAAA
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-268] 9.8E-130 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-244] 1.24E-99 |
| PANTHER |
Tubulin (IPR000217) - T[2-446] 0.0 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[3-213] 5.9E-67 |
| PRINTS |
Tubulin (IPR000217) - T[10-30] 1.2E-88 - T[53-72] 1.2E-88 - T[95-106] 1.2E-88 - T[108-132] 1.2E-88 - T[134-152] 1.2E-88 - T[153-174] 1.2E-88 - T[178-191] 1.2E-88 - T[192-212] 1.2E-88 - T[380-408] 1.2E-88 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[18-33] 1.2E-118 - T[45-58] 1.2E-118 - T[88-101] 1.2E-118 - T[120-128] 1.2E-118 - T[148-160] 1.2E-118 - T[161-172] 1.2E-118 - T[214-226] 1.2E-118 - T[274-289] 1.2E-118 - T[321-342] 1.2E-118 - T[347-360] 1.2E-118 - T[360-379] 1.2E-118 - T[385-401] 1.2E-118 - T[422-438] 1.2E-118 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[49-246] 2.2E-79 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[142-148] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[246-436] 2.23E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[248-393] 3.0E-59 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[263-391] 7.9E-52 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[269-383] 6.7E-68 |
| Gene3D |
Tubulin_C (IPR023123) - T[384-437] 3.0E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA3C_HUMAN | 95.682 % | 870 | 0 |
| TBA3D_HUMAN | 95.682 % | 870 | 0 |
| TBA1C_HUMAN | 93.541 % | 871 | 0 |