- Transcript 'Cisavi.CG.ENS81.R30....' >
- Transcript 'Cisavi.CG.ENS81.R30....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R30.3039111-3052244.16999.t
Possible name(s)
TUBA1A; TUBA3C; TUBA3D
Gene model
Location
R30 [3,039,243 / 3,041,417]
Amino acid sequence
Length: 451
>Cisavi.CG.ENS81.R30.3039111-3052244.16999.p
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAVYPAPQISTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRIIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEAEEAEDEY
Nucleotide sequence
Length: 1,448
>Cisavi.CG.ENS81.R30.3039111-3052244.16999.t
AAGTAAGCTAACTTGACCCATTTTTTCGACTGGCTGCCGAGAAAGCATTTATTCAGTATA
TACCAAGTAAAGAATTCTTATAATTTAACAAAATGCGCGAATGTATCTCAATCCACGTTG
GTCAAGCCGGAGTTCAGATCGGCAATGCTTGCTGGGAGCTCTACTGTCTCGAGCATGGTA
TCCAACCTGATGGTCAAATGCCAAGCGACAAAACAATTGGGGGAGGTGACGATTCCTTCA
ACACTTTCTTCAGCGAGACTGGAGCTGGGAAACATGTCCCTCGAGCCGTTTTCGTCGATC
TCGAACCAACTGTTGTTGACGAGGTTCGCACTGGAACTTACCGACAGCTTTTCCACCCCG
AGCAGTTGATAACTGGAAAAGAAGACGCTGCAAATAATTATGCCAGAGGCCATTACACCA
TTGGCAAAGAAATTGTTGATCTTGTCCTGGACAGAATCCGCAAACTTGCTGATCAGTGCA
CTGGACTCCAAGGTTTCCTGATTTTCCACTCCTTTGGTGGTGGAACCGGATCCGGATTTG
CTTCACTTTTGATGGAACGTTTATCCGTCGATTATGGGAAGAAATCCAAGTTGGAGTTTG
CTGTTTACCCAGCTCCACAGATTTCAACTGCTGTGGTCGAACCCTACAACTCCATCTTGA
CCACCCACACCACTCTTGAGCACTCCGACTGTGCTTTCATGGTAGACAACGAAGCCATCT
ACGACATTTGCCGCCGAAACCTTGACATTGAACGGCCAACTTACACCAACTTGAACAGAA
TCATCGGCCAAATCGTTTCATCGATTACCGCTTCTCTTCGATTCGATGGTGCTCTCAACG
TCGATTTGACAGAGTTCCAGACCAACTTGGTGCCATACCCACGTATTCACTTCCCATTGG
TCACGTACGCCCCAGTGATATCTGCTGAAAAAGCTTACCACGAGCAATTGTCGGTTGCCG
AGATCACCAACGCGTGTTTCGAACCAGCCAATCAGATGGTGAAGTGCGATCCACGTCACG
GAAAATACATGGCTTGCTGCATGCTTTACCGTGGCGATGTTGTCCCGAAAGATGTCAATG
CAGCGATTGCAACGATCAAGACCAAGCGAACCATTCAATTCGTCGACTGGTGTCCAACTG
GGTTCAAGGTTGGTATTAACTACCAACCACCAACCGTTGTACCAGGAGGTGACTTGGCGA
AAGTACAACGAGCAGTTTGTATGTTGAGCAACACCACTGCCATCGCTGAGGCATGGGCCC
GTCTTGACCACAAGTTCGACTTGATGTACGCCAAGCGTGCCTTCGTCCACTGGTATGTCG
GTGAGGGAATGGAGGAAGGAGAATTCTCCGAAGCTCGTGAGGATCTCGCTGCTCTCGAGA
AAGATTACGAAGAGGTTGGAGTTGATTCCGTCGAGGGCGAGGCAGAAGAAGCTGAAGACG
AATATTAG
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-244] 8.77E-102 |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-268] 9.3E-133 |
| PANTHER |
Tubulin (IPR000217) - T[2-447] 0.0 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[3-213] 2.0E-68 |
| PRINTS |
Tubulin (IPR000217) - T[10-30] 5.2E-91 - T[53-72] 5.2E-91 - T[95-106] 5.2E-91 - T[108-132] 5.2E-91 - T[134-152] 5.2E-91 - T[153-174] 5.2E-91 - T[178-191] 5.2E-91 - T[192-212] 5.2E-91 - T[380-408] 5.2E-91 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[18-33] 5.2E-121 - T[45-58] 5.2E-121 - T[88-101] 5.2E-121 - T[120-128] 5.2E-121 - T[148-160] 5.2E-121 - T[161-172] 5.2E-121 - T[214-226] 5.2E-121 - T[274-289] 5.2E-121 - T[321-342] 5.2E-121 - T[347-360] 5.2E-121 - T[360-379] 5.2E-121 - T[385-401] 5.2E-121 - T[422-438] 5.2E-121 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[49-246] 5.3E-84 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[142-148] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[246-437] 2.29E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[248-393] 1.2E-60 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[263-391] 1.4E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[269-383] 6.9E-68 |
| Gene3D |
Tubulin_C (IPR023123) - T[384-450] 2.0E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA1A_HUMAN | 96.674 % | 925 | 0 |
| TBA3C_HUMAN | 98.218 % | 928 | 0 |
| TBA3D_HUMAN | 98.218 % | 928 | 0 |