- Transcript 'Cisavi.CG.ENS81.R30....' >
- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'Cisavi.CG.ENS81.R51....' >
- Clone 'cien53250' >
- Transcript 'Cisavi.CG.ENS81.R30....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R30.3039111-3052244.17000.t
Possible name(s)
TUBA1A; TUBA3C; TUBA3D
Gene model
Location
R30 [3,039,245 / 3,040,909]
Amino acid sequence
Length: 410
>Cisavi.CG.ENS81.R30.3039111-3052244.17000.p
QRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAVYPAPQISTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRIIGQIFQTNLV
PYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR
GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN
TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK
Nucleotide sequence
Length: 1,294
>Cisavi.CG.ENS81.R30.3039111-3052244.17000.t
CAGCGCGAATGTATCTCAATCCACGTTGGTCAAGCCGGAGTTCAGATCGGCAATGCTTGC
TGGGAGCTCTACTGTCTCGAGCATGGTATCCAACCTGATGGTCAAATGCCAAGCGACAAA
ACAATTGGGGGAGGTGACGATTCCTTCAACACTTTCTTCAGCGAGACTGGAGCTGGGAAA
CATGTCCCTCGAGCCGTTTTCGTCGATCTCGAACCAACTGTTGTTGACGAGGTTCGCACT
GGAACTTACCGACAGCTTTTCCACCCCGAGCAGTTGATAACTGGAAAAGAAGACGCTGCA
AATAATTATGCCAGAGGCCATTACACCATTGGCAAAGAAATTGTTGATCTTGTCCTGGAC
AGAATCCGCAAACTTGCTGATCAGTGCACTGGACTCCAAGGTTTCCTGATTTTCCACTCC
TTTGGTGGTGGAACCGGATCCGGATTTGCTTCACTTTTGATGGAACGTTTATCCGTCGAT
TATGGGAAGAAATCCAAGTTGGAGTTTGCTGTTTACCCAGCTCCACAGATTTCAACTGCT
GTGGTCGAACCCTACAACTCCATCTTGACCACCCACACCACTCTTGAGCACTCCGACTGT
GCTTTCATGGTAGACAACGAAGCCATCTACGACATTTGCCGCCGAAACCTTGACATTGAA
CGGCCAACTTACACCAACTTGAACAGAATCATCGGCCAAATCTTCCAGACCAACTTGGTG
CCATACCCACGTATTCACTTCCCATTGGTCACGTACGCCCCAGTGATATCTGCTGAAAAA
GCTTACCACGAGCAATTGTCGGTTGCCGAGATCACCAACGCGTGTTTCGAACCAGCCAAT
CAGATGGTGAAGTGCGATCCACGTCACGGAAAATACATGGCTTGCTGCATGCTTTACCGT
GGCGATGTTGTCCCGAAAGATGTCAATGCAGCGATTGCAACGATCAAGACCAAGCGAACC
ATTCAATTCGTCGACTGGTGTCCAACTGGGTTCAAGGTTGGTATTAACTACCAACCACCA
ACCGTTGTACCAGGAGGTGACTTGGCGAAAGTACAACGAGCAGTTTGTATGTTGAGCAAC
ACCACTGCCATCGCTGAGGCATGGGCCCGTCTTGACCACAAGTTCGACTTGATGTACGCC
AAGCGTGCCTTCGTCCACTGGTATGTCGGTGAGGGAATGGAGGAAGGAGAATTCTCCGAA
GCTCGTGAGGATCTCGCTGCTCTCGAGAAAGATTACGAAGAGGTTGGAGTTGATTCCGTC
GAGGGCGAGGCAGAAGAAGCTGAAGACGAATATT
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-248] 1.9E-117 |
| PANTHER |
Tubulin (IPR000217) - T[2-234] 3.0E-288 - T[235-410] 3.0E-288 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[2-240] 2.49E-97 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[3-213] 1.6E-68 |
| PRINTS |
Tubulin (IPR000217) - T[10-30] 2.5E-91 - T[53-72] 2.5E-91 - T[95-106] 2.5E-91 - T[108-132] 2.5E-91 - T[134-152] 2.5E-91 - T[153-174] 2.5E-91 - T[178-191] 2.5E-91 - T[192-212] 2.5E-91 - T[360-388] 2.5E-91 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[18-33] 4.4E-106 - T[45-58] 4.4E-106 - T[88-101] 4.4E-106 - T[120-128] 4.4E-106 - T[148-160] 4.4E-106 - T[161-172] 4.4E-106 - T[214-226] 4.4E-106 - T[301-322] 4.4E-106 - T[327-340] 4.4E-106 - T[340-359] 4.4E-106 - T[365-381] 4.4E-106 - T[402-410] 4.4E-106 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[49-244] 5.9E-72 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[142-148] . |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[235-373] 7.5E-52 |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[235-409] 2.47E-80 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[243-371] 1.2E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[249-363] 5.8E-68 |
| Gene3D |
Tubulin_C (IPR023123) - T[364-410] 2.1E-29 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA1A_HUMAN | 92.774 % | 840 | 0 |
| TBA3C_HUMAN | 94.172 % | 843 | 0 |
| TBA3D_HUMAN | 94.172 % | 843 | 0 |