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  1. Clone 'cilv005c21' > 
  2. Transcript 'Cisavi.CG.ENS81.R30....' > 
  3. Transcript 'Cisavi.CG.ENS81.R30....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R30.3039111-3052244.17003.t

Possible name(s)

TUBA1A; TUBA3C; TUBA3D

Gene model

Cisavi.CG.ENS81.R30.3039111-3052244

Location

R30 [3,043,718 / 3,050,696]

Sequences

Amino acid sequence

Length: 249

>Cisavi.CG.ENS81.R30.3039111-3052244.17003.p
MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPY
PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD
VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT
AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEG
EAEEAEDEY

Nucleotide sequence

Length: 1,043

>Cisavi.CG.ENS81.R30.3039111-3052244.17003.t
GCTAGGTTTCAACTGCTGTGGTCGAACCCTACAACTCCATCTTGACCACCCATACTACTC
TCGAGCACTCCGACTGTGCCTTCATGGTAGACAACGAAGCCATCTACGACATTTGCCGCC
GAAATCTCGACATTGAACGGCCAACCTATACCAACCTCAATCGTCTTATCGGCCAAATCG
TTTCATCGATTACCGCCTCTCTTCGATTCGATGGTGCTCTTAACGTCGATTTGACAGAGT
TCCAGACCAACTTGGTGCCATACCCACGTATTCACTTCCCATTGGTCACGTACGCCCCAG
TGATATCTGCTGAAAAAGCTTACCACGAGCAATTGTCGGTTGCCGAGATCACCAACGCGT
GTTTCGAACCAGCCAATCAGATGGTGAAGTGCGATCCACGTCACGGAAAATACATGGCGT
GCTGCATGCTTTACCGTGGTGATGTTGTCCCGAAAGATGTCAATGCAGCGATTGCAACGA
TCAAAACAAAACGAACCATTCAATTTGTCGACTGGTGTCCAACTGGCTTCAAGGTTGGTA
TTAACTACCAACCACCAACCGTTGTACCAGGAGGTGACTTGGCGAAAGTACAACGAGCAG
TTTGTATGTTGAGCAACACCACTGCCATCGCTGAGGCATGGGCCCGTCTTGACCACAAGT
TCGACTTGATGTACGCTAAGCGTGCATTCGTCCACTGGTATGTCGGTGAGGGAATGGAGG
AAGGAGAATTCTCCGAAGCTCGTGAGGATCTCGCTGCTCTCGAGAAAGATTACGAAGAGG
TTGGAGTTGATTCCGTCGAGGGCGAGGCAGAAGAAGCTGAAGACGAATATTAGTTTTAAT
CTAAACTTGTGTAATTGAAAAATAAAACGAACGGAACTGTTTTTGTTATTTGGGGTTAAA
TCTTTATAGACCAGTGTTTTCCAGTCAGCGAGCACATATCTATAGAATCGTTAATAGCCC
ACTTACAACGCATTGACACTTTTCTAGTCCTAGCGAACACTTTGATTTTTCCGTAAAGCA
ATAGTGGCTTATAAGTTTGCTTT

InterProScan

SUPERFAMILY
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-43] 2.62E-10
PANTHER
Tubulin (IPR000217) - T[1-244] 7.4E-181
Gene3D
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-66] 7.3E-26
PRINTS
Alpha_tubulin (IPR002452) - T[12-24] 3.9E-75 - T[72-87] 3.9E-75 - T[119-140] 3.9E-75 - T[145-158] 3.9E-75 - T[158-177] 3.9E-75 - T[183-199] 3.9E-75 - T[220-236] 3.9E-75
SUPERFAMILY
Tub_FtsZ_C (IPR008280) - T[44-235] 4.27E-88
SMART
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[46-191] 1.2E-60
Pfam
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[61-189] 3.8E-52
Gene3D
Tubulin/FtsZ_C_sf (IPR037103) - T[67-181] 2.0E-68
Gene3D
Tubulin_C (IPR023123) - T[182-248] 7.5E-35

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TBA1A_HUMAN 97.189 % 511 0
TBA3C_HUMAN 98.381 % 512 0
TBA3D_HUMAN 98.381 % 512 0