- Transcript 'Cisavi.CG.ENS81.R30....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R30.3039111-3052244.17004.t
Possible name(s)
TUBA1A; TUBA3C; TUBA3D
Gene model
Location
R30 [3,049,688 / 3,052,244]
Amino acid sequence
Length: 451
>Cisavi.CG.ENS81.R30.3039111-3052244.17004.p
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPSPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEAEEAEDEY
Nucleotide sequence
Length: 1,506
>Cisavi.CG.ENS81.R30.3039111-3052244.17004.t
AGATCACGTCGTAAGTTGTGAATTTGACCTCTATCTTCTAAGAAGCATTTTCTGTGTATT
TTGCTTTTATTACAAGAAATAAAAACTACATAATCATGCGCGAATGTATCTCAATCCACG
TTGGCCAAGCCGGAGTTCAGATCGGCAACGCATGCTGGGAGCTCTACTGTCTCGAGCATG
GTATCCAACCTGATGGTCAAATGCCAAGCGACAAAACAATTGGGGGAGGTGACGATTCGT
TCAACACTTTCTTCAGCGAGACTGGAGCTGGGAAACATGTCCCACGAGCCGTTTTCGTCG
ATCTCGAACCAACTGTTGTTGACGAGGTTCGCACTGGAACTTACCGACAGCTTTTCCACC
CCGAGCAGTTGATAACTGGAAAGGAAGACGCTGCAAATAATTATGCCAGAGGCCATTACA
CCATTGGCAAAGAAATTGTTGATCTTGTCCTGGACAGAATCCGCAAACTTGCTGATCAGT
GCACTGGACTTCAAGGTTTCCTGATTTTCCATTCCTTTGGTGGTGGAACCGGATCCGGAT
TTGCTTCACTTTTGATGGAACGTTTGTCCGTCGATTATGGGAAGAAATCCAAGTTGGAGT
TCGCGATCTATCCATCCCCGCAGGTTTCAACTGCTGTGGTCGAACCCTACAACTCCATCT
TGACCACCCATACTACTCTCGAGCACTCCGACTGTGCCTTCATGGTAGACAACGAAGCCA
TCTACGACATTTGCCGCCGAAATCTCGACATTGAACGGCCAACCTATACCAACCTCAATC
GTCTTATCGGCCAAATCGTTTCATCGATTACCGCCTCTCTTCGATTCGATGGTGCTCTTA
ACGTCGATTTGACAGAGTTCCAGACCAACTTGGTGCCATACCCACGTATTCACTTCCCAT
TGGTCACGTACGCCCCAGTGATATCTGCTGAAAAAGCTTACCACGAGCAATTGTCGGTTG
CCGAGATCACCAACGCGTGTTTCGAACCAGCCAATCAGATGGTGAAGTGCGATCCACGTC
ACGGAAAATACATGGCGTGCTGCATGCTTTACCGTGGTGATGTTGTCCCGAAAGATGTCA
ATGCAGCGATTGCAACGATCAAAACAAAACGAACCATTCAATTTGTCGACTGGTGTCCAA
CTGGCTTCAAGGTTGGTATTAACTACCAACCACCAACCGTTGTACCAGGAGGTGACTTGG
CGAAAGTACAACGAGCAGTTTGTATGTTGAGCAACACCACTGCCATCGCTGAGGCATGGG
CCCGTCTTGACCACAAGTTCGACTTGATGTACGCTAAGCGTGCATTCGTCCACTGGTATG
TCGGTGAGGGAATGGAGGAAGGAGAATTCTCCGAAGCTCGTGAGGATCTCGCTGCTCTCG
AGAAAGATTACGAAGAGGTTGGAGTTGATTCCGTCGAGGGCGAGGCAGAAGAAGCTGAAG
ACGAATATTAGTTTTAATCTAAACTTGTGTAATTGAAAAATAAAACGAACGGAACTGTTT
TTGTTA
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-244] 2.62E-102 |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-268] 2.7E-133 |
| PANTHER |
Tubulin (IPR000217) - T[2-447] 0.0 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[3-213] 7.7E-69 |
| PRINTS |
Tubulin (IPR000217) - T[10-30] 3.0E-91 - T[53-72] 3.0E-91 - T[95-106] 3.0E-91 - T[108-132] 3.0E-91 - T[134-152] 3.0E-91 - T[153-174] 3.0E-91 - T[178-191] 3.0E-91 - T[192-212] 3.0E-91 - T[380-408] 3.0E-91 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[18-33] 5.4E-121 - T[45-58] 5.4E-121 - T[88-101] 5.4E-121 - T[120-128] 5.4E-121 - T[148-160] 5.4E-121 - T[161-172] 5.4E-121 - T[214-226] 5.4E-121 - T[274-289] 5.4E-121 - T[321-342] 5.4E-121 - T[347-360] 5.4E-121 - T[360-379] 5.4E-121 - T[385-401] 5.4E-121 - T[422-438] 5.4E-121 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[49-246] 3.0E-84 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[142-148] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[246-437] 2.29E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[248-393] 1.2E-60 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[263-391] 1.4E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[269-383] 6.9E-68 |
| Gene3D |
Tubulin_C (IPR023123) - T[384-450] 2.0E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA1A_HUMAN | 97.118 % | 927 | 0 |
| TBA3C_HUMAN | 98.664 % | 929 | 0 |
| TBA3D_HUMAN | 98.664 % | 929 | 0 |