- Transcript 'Boleac.CG.SB_v3.S5.g...' >
- Transcript 'Cisavi.CG.ENS81.R312...' >
- Transcript 'Cisavi.CG.ENS81.R312...' >
- Transcript 'Cisavi.CG.ENS81.R312...' >
- Transcript 'Cisavi.CG.ENS81.R312...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R312.642252-662448.02260.t
Possible name(s)
ABCC1; ABCC4
Gene model
Location
R312 [642,287 / 661,902]
Amino acid sequence
Length: 1,181
>Cisavi.CG.ENS81.R312.642252-662448.02260.p
ESAGCFSKLFFCWAQPLMKKGAKKLLNKESCFTSDPQNQPNNSQFEYQRLENKATKSRTV
LKSLHRNFGRTYYLLGLLKFGSDMLGFAGPILLNYLVKYVESNEPTIHGCYYAGGLFLSS
FIGALLSTHFDYQVNKVSLRIKTSLITAVFNKSMLAKPVSLAQFSTGEITNFMSTDVNRI
VNFCPSFHQFWSLPIQVVITLVLLYQQVGVRLQAGLVLALLMILFNRYLAKKMGEYNKDM
MGHKDDRVKLMTEILLGIRVVKFNAWENLLSDRINSIRAKELKSLKGLKYFDAGCVYLWA
TTPVLITLLTFSIYSITGHQLTAAKVCCVEVLRIENGTFSWGFPPPAEDMNGLHQVQGQD
QLLRDLDITIKEDTGFDPTIFGRMCQLTRLITSISSSTLYTQGELVGVVGTVGAGKSSLL
SAISARMERLDGSIHCGCHDDGIAIVMQESWLQHATIRDNILWGSEYDAAFYLQVVQCCA
LKEDFAVLPSGDSTEVGENGVTLSGGQKARVVILISSVYLQRKKLYLLDDPLAAVDQHVA
GHIFHECIDGLLGGTTRILCTHHTNPLCIASHSPDIILRRHSTWTNHQPMLKRLVHDRRL
PPIHAEHLPCSNHRRPWNDHHHVLRVALGCCPSAATCCVLLLAYRFVLLAENKPIKTEPP
ITHNVMWYLMVYGIIAASNSIFTLIRAFTFAYGGIRAATRMHVKLLASIMKAPISFFDAT
PLGRIINRFSSDLYTIDDFLPFMLNIFLAQITAVLGTIIITCYGLPWFAVLLLPLAVCYY
YIQYYYRLTSRELKRLSSISLSPIYAHFNESLMGVSTIRPFNRSSSFINHNMELVDRNQR
CNYSTLVAQKWLGVRLQMMGVVMVTGVAVTAIVQHEVQFISPGMVGLALSYALSVTGGLS
GVITSFTETEKHMVAVERQSYYINNVPQERGISTRLSSPWPLDGAIEFKEVCLRYRPNLP
LALDGVSFQIAGGEKVGIVGRTGGGKSSLFLVLFGLVPTTGGAVIIDGVNIRKISTDQLR
GEMAIIPQDPFLFSGSLRANLDPTGAVCADERLWWALESCGLRGVAEQMGGLDSNMGERG
QRLSAGQRQLLCLARALLRKVKIVCLDEATANVDLESDRLIQETILTHFKRCTVLTIAHR
IDSVMRSDRVIVMDNGHVIEIGEPSQLLNQPMSFFAQLANQ
Nucleotide sequence
Length: 3,543
>Cisavi.CG.ENS81.R312.642252-662448.02260.t
GAATCAGCGGGTTGTTTTTCAAAGTTGTTTTTCTGTTGGGCCCAGCCTCTGATGAAAAAA
GGAGCGAAAAAGTTACTCAACAAGGAATCTTGCTTCACCTCAGATCCACAAAACCAACCG
AATAATTCCCAATTTGAGTATCAGAGATTAGAAAATAAAGCCACAAAATCTCGAACTGTT
TTAAAATCGTTGCATCGTAATTTCGGCCGGACGTATTACTTGCTCGGCCTGTTGAAATTT
GGAAGCGATATGTTGGGCTTTGCTGGTCCGATACTTCTCAACTATCTGGTGAAGTATGTT
GAATCAAACGAACCAACCATACACGGGTGTTACTACGCTGGTGGTCTCTTTCTATCCAGT
TTCATCGGCGCTTTGTTGTCAACTCATTTCGATTACCAGGTAAACAAAGTATCGCTGAGA
ATAAAGACGTCATTGATAACCGCGGTGTTCAACAAATCAATGTTGGCCAAACCGGTGTCG
TTGGCCCAATTTAGCACGGGGGAAATCACCAACTTCATGAGCACGGATGTCAACAGAATC
GTCAACTTCTGCCCGAGTTTCCACCAGTTCTGGAGTCTCCCCATCCAAGTTGTTATTACT
CTGGTTCTGCTGTATCAACAGGTTGGTGTTCGATTACAAGCAGGCCTGGTCCTTGCACTG
TTGATGATCCTGTTCAACCGATACTTAGCGAAGAAGATGGGAGAATACAACAAGGACATG
ATGGGACACAAGGATGACAGAGTCAAGTTAATGACAGAGATCTTACTTGGAATACGAGTT
GTCAAATTCAACGCTTGGGAGAATCTGTTGAGTGATCGGATTAATAGCATAAGAGCAAAA
GAATTGAAGTCATTGAAAGGATTGAAATACTTTGACGCTGGATGTGTGTACCTGTGGGCT
ACCACGCCTGTTCTAATCACTCTCCTCACATTCTCCATCTATTCTATCACTGGACACCAA
CTTACTGCAGCTAAGGTATGTTGTGTGGAAGTTTTACGGATAGAAAACGGAACATTTTCA
TGGGGATTCCCCCCACCAGCAGAAGATATGAACGGGCTTCATCAGGTCCAGGGTCAAGAT
CAACTTCTAAGAGATTTGGACATCACGATTAAGGAGGACACTGGTTTTGATCCCACAATC
TTTGGAAGAATGTGCCAACTAACAAGACTGATCACTTCAATAAGCAGCTCGACTCTTTAC
ACCCAGGGTGAGCTAGTGGGGGTGGTGGGTACAGTGGGGGCTGGGAAGAGTTCGTTGCTA
TCGGCGATATCAGCTCGCATGGAACGCTTGGATGGTTCCATTCATTGTGGTTGCCATGAC
GATGGAATTGCCATTGTGATGCAAGAATCATGGTTACAGCATGCAACTATAAGGGATAAC
ATACTATGGGGTTCTGAGTACGACGCAGCGTTTTATTTGCAAGTCGTGCAGTGTTGCGCA
TTGAAAGAAGATTTTGCAGTGTTGCCAAGTGGGGATTCAACGGAAGTGGGGGAGAATGGG
GTTACGCTGAGTGGGGGGCAGAAAGCGAGGGTCGTAATCTTAATTTCATCTGTATATCTG
CAGAGGAAGAAGTTGTACCTGCTGGACGACCCACTAGCTGCAGTGGATCAGCACGTAGCC
GGTCATATCTTCCATGAATGCATTGATGGCTTACTGGGTGGGACTACAAGGATACTGTGC
ACTCATCATACCAATCCATTGTGCATTGCTTCCCATAGCCCCGATATCATTCTTCGACGC
CACTCCACTTGGACGAATCATCAACCGATGCTCAAGCGACTTGTACACGATCGACGACTT
CCTCCCATTCATGCTGAACATCTTCCTTGCTCAAATCACCGCCGTCCTTGGAACGATCAT
CATCACGTGCTACGGGTTGCCCTGGGTTGCTGTCCTTCTGCTGCCACTTGCTGTGTGCTA
TTACTAGCATACAGGTTCGTACTCTTGGCTGAAAATAAACCAATAAAGACCGAGCCCCCA
ATCACCCACAACGTAATGTGGTATCTCATGGTGTATGGGATTATCGCCGCTAGCAACAGT
ATCTTCACCCTCATTCGTGCATTCACGTTCGCATACGGGGGAATCCGAGCAGCAACTCGA
ATGCACGTCAAACTGCTAGCATCCATTATGAAGGCCCCGATATCATTCTTCGACGCCACC
CCACTTGGTCGAATCATCAACCGATTCTCGAGCGACTTGTACACGATCGACGACTTCCTC
CCATTCATGCTGAACATCTTCCTTGCTCAAATCACCGCCGTCCTTGGAACAATCATCATC
ACGTGCTACGGGTTGCCCTGGTTTGCTGTCCTATTGCTGCCACTTGCTGTGTGCTATTAC
TACATTCAGTATTACTATCGATTAACATCACGAGAGCTGAAGAGACTGAGCAGCATCAGT
TTGTCTCCCATCTACGCTCATTTCAATGAGTCATTGATGGGAGTTTCTACCATCCGTCCA
TTCAATCGATCCTCATCATTCATAAATCACAACATGGAGTTGGTGGACCGGAACCAGCGT
TGCAACTACTCGACGCTCGTCGCACAGAAGTGGTTGGGAGTCCGACTTCAAATGATGGGG
GTTGTCATGGTAACAGGAGTGGCGGTGACGGCGATAGTGCAACATGAAGTCCAGTTCATT
TCACCAGGAATGGTCGGACTTGCGCTCTCCTACGCGCTCTCTGTCACTGGAGGGCTTTCT
GGAGTCATCACATCATTTACGGAGACCGAGAAGCACATGGTGGCGGTAGAGAGGCAGTCG
TATTACATCAACAATGTCCCTCAGGAGCGAGGCATATCAACAAGGTTGTCGTCACCGTGG
CCATTAGATGGAGCTATAGAGTTCAAGGAAGTTTGCTTGAGATACAGACCCAACCTGCCC
CTAGCTCTCGACGGAGTGTCGTTCCAAATAGCTGGAGGTGAGAAAGTGGGGATCGTTGGA
CGGACAGGAGGTGGGAAGTCGAGTTTGTTTCTCGTCTTGTTCGGCCTCGTTCCTACCACC
GGGGGAGCTGTGATCATCGACGGCGTCAACATTAGGAAGATCTCAACCGACCAGCTGCGT
GGTGAGATGGCCATCATCCCTCAAGATCCGTTTCTCTTCAGTGGGTCACTCCGTGCAAAT
CTCGACCCCACTGGGGCCGTGTGTGCGGACGAACGATTATGGTGGGCGCTGGAGAGCTGT
GGGTTACGGGGGGTCGCCGAACAAATGGGGGGCCTCGATTCTAACATGGGTGAGAGGGGT
CAAAGGTTGTCGGCGGGACAACGGCAATTGCTCTGCCTCGCTCGAGCCCTCTTGAGGAAA
GTCAAGATCGTTTGTTTGGATGAAGCCACAGCAAATGTCGACTTGGAATCTGATCGTTTG
ATCCAAGAGACGATTTTGACGCATTTCAAGCGATGCACTGTGCTCACTATTGCACACAGA
ATCGATTCAGTCATGCGTAGCGACCGCGTAATTGTCATGGACAACGGTCATGTGATCGAA
ATCGGTGAACCGAGTCAACTTTTAAATCAACCAATGAGCTTCTTCGCTCAACTTGCCAAC
CAA
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[61-323] 1.7E-30 - T[637-929] 1.31E-58 |
| Gene3D |
ABC1_TM_sf (IPR036640) - T[61-327] 1.6E-19 - T[633-930] 5.5E-44 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[74-322] 5.7E-27 - T[656-896] 1.2E-45 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[74-326] 29.116 - T[667-911] 38.661 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[363-607] 14.386 - T[946-1180] 19.221 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[401-569] 1.92E-33 - T[938-1176] 6.13E-68 |
| Pfam |
ABC_transporter-like (IPR003439) - T[401-532] 2.4E-13 - T[963-1111] 1.1E-28 |
| SMART |
AAA+_ATPase (IPR003593) - T[402-583] 5.9E-6 - T[972-1157] 4.8E-11 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[503-517] . - T[1083-1097] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MRP1_HUMAN | 44.886 % | 441 | 9.87E-133 |
| ABCCB_HUMAN | 28.872 % | 472 | 5.37E-145 |
| MRP7_HUMAN | 50.484 % | 441 | 4.44E-133 |