- Transcript 'Cisavi.CG.ENS81.R312...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R312.642252-662448.02262.t
Possible name(s)
ABCC1; ABCC4
Gene model
Location
R312 [642,509 / 661,902]
Amino acid sequence
Length: 1,095
>Cisavi.CG.ENS81.R312.642252-662448.02262.p
TVLKSLHRNFGRTYYLLGLLKFGSDMLGFAGPILLNYLVKYVESNEPTIHGCYYAGGLFL
SSFIGALLSTHFDYQVNKVSLRIKTSLITAVFNKSMLAKPVSLAQFSTGEITNFMSTDVN
RIVNFCPSFHQFWSLPIQLMTEILLGIRVVKFNAWENLLSDRINSIRAKELKSLKGLKYF
DAGCVYLWATTPVLITLLTFSIYSITGHQLTAAKVCCQRLFKDILNYLKKIFQNNRAKKI
LRIENGTFSWGFPPPAEDMNGLHQVQGQDQLLRDLDITIKEGELVGVVGTVGAGKSSLLS
AISARMERLDGSIHCGCHDDGIAIVMQESWLQHATIRDNILWGSEYDAAFYLQVVQCCAL
KEDFAVLPSGDSTEVGENGVTLSGGQKARVVILISSVYLQRKKLYLLDDPLAAVDQHVAG
HIFHECIDGLLGGTTRILCTHHTNKKTMLAFILNNNLDLCISCFCKFLCNTVYTSIATSP
DIILRRHSTWTNHQPMLKRLVHDRRLPPIHAEHLPCSNHRRPWNDHHHVLRVALGCCPSA
ATCCVLLLAYRFVLLAENKPIKRLQIAFVILKPPITHNVMWYLMVYGIIAASNSIFTLIR
AFTFAYGGIRAATRMHVKLLASIMKAPISFFDATPLGRIINRFSSDLYTIDDFLPFMLNI
FLAQITAVLGTIIITCYGLPWFAVLLLPLAVCYYYIQYYYRLTSRELKRLSSISLSPIYA
HFNESLMGVSTIRPFNRSSSFINHNMELVDRNQRCNYSTLVAQKWLGVRLQMMGVVMVTG
VAVTAIVQHEVQFISPGMVGLALSYALSVTGGLSGVITSFTETEKHMVAVERQSYYINNV
PQERGISTRLSSPWPLDGAIEFKEVCLRYRPNLPLALDGVSFQIAGGEKVGIVGRTGGGK
SSLFLVLFGLVPTTGGAVIIDGVNIRKISTDQLRGEMAIIPQDPFLFSGSLRANLDPTGA
VCADERLWWALESCGLRGVAEQMGGLDSNMGERGQRLSAGQRQLLCLARALLRKVKIVCL
DEATANVDLESDRLIQETILTHFKRCTVLTIAHRIDSVMRSDRVIVMDNGHVIEIGEPSQ
LLNQPMSFFAQLANQ
Nucleotide sequence
Length: 3,285
>Cisavi.CG.ENS81.R312.642252-662448.02262.t
ACTGTTTTAAAATCGTTGCATCGTAATTTCGGCCGGACGTATTACTTGCTCGGCCTGTTG
AAATTTGGAAGCGATATGTTGGGCTTTGCTGGTCCGATACTTCTCAACTATCTGGTGAAG
TATGTTGAATCAAACGAACCAACCATACACGGGTGTTACTACGCTGGTGGTCTCTTTCTA
TCCAGTTTCATCGGCGCTTTGTTGTCAACTCATTTCGATTACCAGGTAAACAAAGTATCG
CTGAGAATAAAGACGTCATTGATAACCGCGGTGTTCAACAAATCAATGTTGGCCAAACCG
GTGTCGTTGGCCCAATTTAGCACGGGGGAAATCACCAACTTCATGAGCACGGATGTCAAC
AGAATCGTCAACTTCTGCCCGAGTTTCCACCAGTTCTGGAGTCTCCCCATCCAATTAATG
ACAGAGATCTTACTTGGAATACGAGTTGTCAAATTCAACGCTTGGGAGAATCTGTTGAGT
GATCGGATTAATAGCATAAGAGCAAAAGAATTGAAGTCATTGAAAGGATTGAAATACTTT
GACGCTGGATGTGTGTACCTGTGGGCTACCACGCCTGTTCTAATCACTCTCCTCACATTC
TCCATCTATTCTATCACTGGACACCAACTTACTGCAGCTAAGGTATGTTGTCAACGTCTA
TTTAAAGATATTTTAAATTATTTAAAAAAAATATTTCAAAATAACAGAGCTAAGAAAATT
TTACGGATAGAAAACGGAACATTTTCATGGGGATTCCCCCCACCAGCAGAAGATATGAAC
GGGCTTCATCAGGTCCAGGGTCAAGATCAACTTCTAAGAGATTTGGACATCACGATTAAG
GAGGGTGAGCTAGTGGGGGTGGTGGGTACAGTGGGGGCTGGGAAGAGTTCGTTGCTATCG
GCGATATCAGCTCGCATGGAACGCTTGGATGGTTCCATTCATTGTGGTTGCCATGACGAT
GGAATTGCCATTGTGATGCAAGAATCATGGTTACAGCATGCAACTATAAGGGATAACATA
CTATGGGGTTCTGAGTACGACGCAGCGTTTTATTTGCAAGTCGTGCAGTGTTGCGCATTG
AAAGAAGATTTTGCAGTGTTGCCAAGTGGGGATTCAACGGAAGTGGGGGAGAATGGGGTT
ACGCTGAGTGGGGGGCAGAAAGCGAGGGTCGTAATCTTAATTTCATCTGTATATCTGCAG
AGGAAGAAGTTGTACCTGCTGGACGACCCACTAGCTGCAGTGGATCAGCACGTAGCCGGT
CATATCTTCCATGAATGCATTGATGGCTTACTGGGTGGGACTACAAGGATACTGTGCACT
CATCATACCAATAAAAAAACAATGTTAGCGTTCATTTTAAATAATAATCTGGATTTATGC
ATTTCTTGTTTCTGCAAGTTTTTATGCAATACAGTTTATACAAGCATTGCTACAAGCCCC
GATATCATTCTTCGACGCCACTCCACTTGGACGAATCATCAACCGATGCTCAAGCGACTT
GTACACGATCGACGACTTCCTCCCATTCATGCTGAACATCTTCCTTGCTCAAATCACCGC
CGTCCTTGGAACGATCATCATCACGTGCTACGGGTTGCCCTGGGTTGCTGTCCTTCTGCT
GCCACTTGCTGTGTGCTATTACTAGCATACAGGTTCGTACTCTTGGCTGAAAATAAACCA
ATAAAGAGGTTGCAAATAGCATTTGTTATTTTGAAACCCCCAATCACCCACAACGTAATG
TGGTATCTCATGGTGTATGGGATTATCGCCGCTAGCAACAGTATCTTCACCCTCATTCGT
GCATTCACGTTCGCATACGGGGGAATCCGAGCAGCAACTCGAATGCACGTCAAACTGCTA
GCATCCATTATGAAGGCCCCGATATCATTCTTCGACGCCACCCCACTTGGTCGAATCATC
AACCGATTCTCGAGCGACTTGTACACGATCGACGACTTCCTCCCATTCATGCTGAACATC
TTCCTTGCTCAAATCACCGCCGTCCTTGGAACAATCATCATCACGTGCTACGGGTTGCCC
TGGTTTGCTGTCCTATTGCTGCCACTTGCTGTGTGCTATTACTACATTCAGTATTACTAT
CGATTAACATCACGAGAGCTGAAGAGACTGAGCAGCATCAGTTTGTCTCCCATCTACGCT
CATTTCAATGAGTCATTGATGGGAGTTTCTACCATCCGTCCATTCAATCGATCCTCATCA
TTCATAAATCACAACATGGAGTTGGTGGACCGGAACCAGCGTTGCAACTACTCGACGCTC
GTCGCACAGAAGTGGTTGGGAGTCCGACTTCAAATGATGGGGGTTGTCATGGTAACAGGA
GTGGCGGTGACGGCGATAGTGCAACATGAAGTCCAGTTCATTTCACCAGGAATGGTCGGA
CTTGCGCTCTCCTACGCGCTCTCTGTCACTGGAGGGCTTTCTGGAGTCATCACATCATTT
ACGGAGACCGAGAAGCACATGGTGGCGGTAGAGAGGCAGTCGTATTACATCAACAATGTC
CCTCAGGAGCGAGGCATATCAACAAGGTTGTCGTCACCGTGGCCATTAGATGGAGCTATA
GAGTTCAAGGAAGTTTGCTTGAGATACAGACCCAACCTGCCCCTAGCTCTCGACGGAGTG
TCGTTCCAAATAGCTGGAGGTGAGAAAGTGGGGATCGTTGGACGGACAGGAGGTGGGAAG
TCGAGTTTGTTTCTCGTCTTGTTCGGCCTCGTTCCTACCACCGGGGGAGCTGTGATCATC
GACGGCGTCAACATTAGGAAGATCTCAACCGACCAGCTGCGTGGTGAGATGGCCATCATC
CCTCAAGATCCGTTTCTCTTCAGTGGGTCACTCCGTGCAAATCTCGACCCCACTGGGGCC
GTGTGTGCGGACGAACGATTATGGTGGGCGCTGGAGAGCTGTGGGTTACGGGGGGTCGCC
GAACAAATGGGGGGCCTCGATTCTAACATGGGTGAGAGGGGTCAAAGGTTGTCGGCGGGA
CAACGGCAATTGCTCTGCCTCGCTCGAGCCCTCTTGAGGAAAGTCAAGATCGTTTGTTTG
GATGAAGCCACAGCAAATGTCGACTTGGAATCTGATCGTTTGATCCAAGAGACGATTTTG
ACGCATTTCAAGCGATGCACTGTGCTCACTATTGCACACAGAATCGATTCAGTCATGCGT
AGCGACCGCGTAATTGTCATGGACAACGGTCATGTGATCGAAATCGGTGAACCGAGTCAA
CTTTTAAATCAACCAATGAGCTTCTTCGCTCAACTTGCCAACCAA
| Gene3D |
ABC1_TM_sf (IPR036640) - T[3-141] 3.5E-7 - T[520-844] 3.6E-45 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[4-212] 1.12E-17 - T[574-843] 4.19E-58 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[16-140] 3.7E-10 - T[572-810] 5.1E-45 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[16-139] 14.371 - T[566-825] 39.051 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[241-495] 15.613 - T[860-1094] 19.221 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[268-446] 7.76E-37 - T[852-1090] 5.43E-68 |
| Pfam |
ABC_transporter-like (IPR003439) - T[272-411] 1.1E-15 - T[877-1025] 9.8E-29 |
| SMART |
AAA+_ATPase (IPR003593) - T[281-463] 5.6E-4 - T[886-1071] 4.8E-11 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[382-396] . - T[997-1011] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MRP1_HUMAN | 45.703 % | 440 | 2.78E-133 |
| ABCCB_HUMAN | 31.628 % | 447 | 7.15E-137 |
| MRP4_HUMAN | 30.315 % | 525 | 2.22E-166 |