- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C12.677.v2...' >
- Transcript 'KH2012:KH.C10.36.v1....' >
- Transcript 'KH2012:KH.C14.232.v1...' >
- Transcript 'Cisavi.CG.ENS81.R312...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R312.642252-662448.02263.t
Possible name(s)
ABCC1; ABCC4
Gene model
Location
R312 [642,593 / 661,902]
Amino acid sequence
Length: 1,135
>Cisavi.CG.ENS81.R312.642252-662448.02263.p
FAGPILLNYLVKYVESNEPTIHGCYYAGGLFLSSFIGALLSTHFDYQVNKVSLRIKTSLI
TAVFNKSMLAKPVSLAQFSTGEITNFMSTDVNRIVNFCPSFHQFWSLPIQVVITLVLLYQ
QVQLVFLAGLVLALLMILFNRYLAKKMGEYNKDMMGHKDDRVKLMTEILLGIRVVKFNAW
ENLLILSLLPSIRAKELKSLKGLKYFDAGCVYLWATTPVLITLLTFSIYSITGHQLTAAK
VSEDMNGLHQVQGQDQLLRDLDITIKEQDTGFDPTIFGRMCQLTRLITSISSSSVYSLSG
GFHPTTLGLKVHHLINMPTDTIDPIIKRLYTQGELVGVVGTVGAGKSSLLSAISARMERL
DGSIHCGCHDDGIAIVMQESWLQHATIRDNILWGSEYDAAFYLQVVQCCALKEDFAVLPS
GDSTEVGENGVTLSGGQKARVVILISSVYLQRKKLYLLDDPLAAVDQHVAGHIFHECIDG
LLGGTTRILCTHHTNVHFKFFQNYSTLKIIIWIYAFLVSASFYAIQFIQALLQAPISFFD
ATPLGRIINRCSSDLYTIDDFLPFMLNIFLAQITAVLGTIIITCYGLPWVAVLLLPLAVF
VLLAENKPIKTEPPITHNVMWYLMVYGIIAASNSIFTLIRAFTFAYGGIRAATRMHVKLL
ASIMKAPISFFDATPLGRIINRFSSDLYTIDDFLPFMLNIFLAQITAVLGTIIITCYGLP
WFAVLLLPLAVCYYYIQYYYRLTSRELKRLSSISLSPIYAHFNESLMGVSTIRPFNRSSS
FINHNMELVDRNQRCNYSTLVAQKWLGVRLQMMGVVMVTGVAVTAIVQHEVQFISPGMVG
LALSYALSVTGGLSGVITSFTETEKHMVAVERQSYYINNVPQERGISTRLSSPWPLDGAI
EFKEVCLRYRPNLPLALDGVSFQIAGGEKVGIVGRTGGGKSSLFLVLFGLVPTTGGAVII
DGVNIRKISTDQLRGEMAIIPQDPFLFSGSLRANLDPTGAVCADERLWWALESCGLRGVA
EQMGGLDSNMGERGQRLSAGQRQLLCLARALLRKVKIVCLDEATANVDLESDRLIQETIL
THFKRCTVLTIAHRIDSVMRSDRVIVMDNGHVIEIGEPSQLLNQPMSFFAQLANQ
Nucleotide sequence
Length: 3,405
>Cisavi.CG.ENS81.R312.642252-662448.02263.t
TTTGCTGGTCCGATACTTCTCAACTATCTGGTGAAGTATGTTGAATCAAACGAACCAACC
ATACACGGGTGTTACTACGCTGGTGGTCTCTTTCTATCCAGTTTCATCGGCGCTTTGTTG
TCAACTCATTTCGATTACCAGGTAAACAAAGTATCGCTGAGAATAAAGACGTCATTGATA
ACCGCGGTGTTCAACAAATCAATGTTGGCCAAACCGGTGTCGTTGGCCCAATTTAGCACG
GGGGAAATCACCAACTTCATGAGCACGGATGTCAACAGAATCGTCAACTTCTGCCCGAGT
TTCCACCAGTTCTGGAGTCTCCCCATCCAAGTTGTTATTACTCTGGTTCTGCTGTATCAA
CAGGTCCAACTGGTATTCCTAGCAGGCCTGGTCCTTGCACTGTTGATGATCCTGTTCAAC
CGATACTTAGCGAAGAAGATGGGAGAATACAACAAGGACATGATGGGACACAAGGATGAC
AGAGTCAAGTTAATGACAGAGATCTTACTTGGAATACGAGTTGTCAAATTCAACGCTTGG
GAGAATCTGTTGATTCTTTCCTTATTACCCAGCATAAGAGCAAAAGAATTGAAGTCATTG
AAAGGATTGAAATACTTTGACGCTGGATGTGTGTACCTGTGGGCTACCACGCCTGTTCTA
ATCACTCTCCTCACATTCTCCATCTATTCTATCACTGGACACCAACTTACTGCAGCTAAG
GTATCAGAAGATATGAACGGGCTTCATCAGGTCCAGGGTCAAGATCAACTTCTAAGAGAT
TTGGACATCACGATTAAGGAGCAGGACACTGGTTTTGATCCCACAATCTTTGGAAGAATG
TGCCAACTAACAAGACTGATCACTTCAATAAGCAGCTCCTCTGTTTATTCATTAAGCGGT
GGTTTTCATCCCACAACCTTAGGACTGAAAGTCCATCACCTTATCAATATGCCAACTGAC
ACGATTGACCCCATAATTAAGCGACTCTACACCCAGGGTGAGCTAGTGGGGGTGGTGGGT
ACAGTGGGGGCTGGGAAGAGTTCGTTGCTATCGGCGATATCAGCTCGCATGGAACGCTTG
GATGGTTCCATTCATTGTGGTTGCCATGACGATGGAATTGCCATTGTGATGCAAGAATCA
TGGTTACAGCATGCAACTATAAGGGATAACATACTATGGGGTTCTGAGTACGACGCAGCG
TTTTATTTGCAAGTCGTGCAGTGTTGCGCATTGAAAGAAGATTTTGCAGTGTTGCCAAGT
GGGGATTCAACGGAAGTGGGGGAGAATGGGGTTACGCTGAGTGGGGGGCAGAAAGCGAGG
GTCGTAATCTTAATTTCATCTGTATATCTGCAGAGGAAGAAGTTGTACCTGCTGGACGAC
CCACTAGCTGCAGTGGATCAGCACGTAGCCGGTCATATCTTCCATGAATGCATTGATGGC
TTACTGGGTGGGACTACAAGGATACTGTGCACTCATCATACCAACGTTCATTTTAAGTTT
TTTCAAAACTATTCCACTTTAAAGATAATAATCTGGATTTATGCATTTCTTGTTTCTGCA
AGTTTTTATGCAATACAGTTTATACAAGCATTGCTACAAGCCCCGATATCATTCTTCGAC
GCCACTCCACTTGGACGAATCATCAACCGATGCTCAAGCGACTTGTACACGATCGACGAC
TTCCTCCCATTCATGCTGAACATCTTCCTTGCTCAAATCACCGCCGTCCTTGGAACGATC
ATCATCACGTGCTACGGGTTGCCCTGGGTTGCTGTCCTTCTGCTGCCACTTGCTGTGTTC
GTACTCTTGGCTGAAAATAAACCAATAAAGACCGAGCCCCCAATCACCCACAACGTAATG
TGGTATCTCATGGTGTATGGGATTATCGCCGCTAGCAACAGTATCTTCACCCTCATTCGT
GCATTCACGTTCGCATACGGGGGAATCCGAGCAGCAACTCGAATGCACGTCAAACTGCTA
GCATCCATTATGAAGGCCCCGATATCATTCTTCGACGCCACCCCACTTGGTCGAATCATC
AACCGATTCTCGAGCGACTTGTACACGATCGACGACTTCCTCCCATTCATGCTGAACATC
TTCCTTGCTCAAATCACCGCCGTCCTTGGAACAATCATCATCACGTGCTACGGGTTGCCC
TGGTTTGCTGTCCTATTGCTGCCACTTGCTGTGTGCTATTACTACATTCAGTATTACTAT
CGATTAACATCACGAGAGCTGAAGAGACTGAGCAGCATCAGTTTGTCTCCCATCTACGCT
CATTTCAATGAGTCATTGATGGGAGTTTCTACCATCCGTCCATTCAATCGATCCTCATCA
TTCATAAATCACAACATGGAGTTGGTGGACCGGAACCAGCGTTGCAACTACTCGACGCTC
GTCGCACAGAAGTGGTTGGGAGTCCGACTTCAAATGATGGGGGTTGTCATGGTAACAGGA
GTGGCGGTGACGGCGATAGTGCAACATGAAGTCCAGTTCATTTCACCAGGAATGGTCGGA
CTTGCGCTCTCCTACGCGCTCTCTGTCACTGGAGGGCTTTCTGGAGTCATCACATCATTT
ACGGAGACCGAGAAGCACATGGTGGCGGTAGAGAGGCAGTCGTATTACATCAACAATGTC
CCTCAGGAGCGAGGCATATCAACAAGGTTGTCGTCACCGTGGCCATTAGATGGAGCTATA
GAGTTCAAGGAAGTTTGCTTGAGATACAGACCCAACCTGCCCCTAGCTCTCGACGGAGTG
TCGTTCCAAATAGCTGGAGGTGAGAAAGTGGGGATCGTTGGACGGACAGGAGGTGGGAAG
TCGAGTTTGTTTCTCGTCTTGTTCGGCCTCGTTCCTACCACCGGGGGAGCTGTGATCATC
GACGGCGTCAACATTAGGAAGATCTCAACCGACCAGCTGCGTGGTGAGATGGCCATCATC
CCTCAAGATCCGTTTCTCTTCAGTGGGTCACTCCGTGCAAATCTCGACCCCACTGGGGCC
GTGTGTGCGGACGAACGATTATGGTGGGCGCTGGAGAGCTGTGGGTTACGGGGGGTCGCC
GAACAAATGGGGGGCCTCGATTCTAACATGGGTGAGAGGGGTCAAAGGTTGTCGGCGGGA
CAACGGCAATTGCTCTGCCTCGCTCGAGCCCTCTTGAGGAAAGTCAAGATCGTTTGTTTG
GATGAAGCCACAGCAAATGTCGACTTGGAATCTGATCGTTTGATCCAAGAGACGATTTTG
ACGCATTTCAAGCGATGCACTGTGCTCACTATTGCACACAGAATCGATTCAGTCATGCGT
AGCGACCGCGTAATTGTCATGGACAACGGTCATGTGATCGAAATCGGTGAACCGAGTCAA
CTTTTAAATCAACCAATGAGCTTCTTCGCTCAACTTGCCAACCAA
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[1-241] 28.074 - T[526-567] 9.551 - T[568-865] 39.273 |
| Gene3D |
ABC1_TM_sf (IPR036640) - T[1-242] 1.2E-17 - T[505-610] 1.0E-11 - T[611-884] 4.9E-43 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[2-194] 6.41E-25 - T[512-603] 8.63E-13 - T[606-883] 4.71E-56 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[2-238] 8.3E-24 - T[526-603] 1.6E-12 - T[613-850] 3.3E-45 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[302-544] 13.472 - T[900-1134] 19.221 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[331-496] 3.09E-33 - T[892-1130] 5.73E-68 |
| SMART |
AAA+_ATPase (IPR003593) - T[332-517] 0.001 - T[926-1111] 4.8E-11 |
| Pfam |
ABC_transporter-like (IPR003439) - T[332-462] 3.0E-13 - T[917-1065] 1.0E-28 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[433-447] . - T[1037-1051] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MRP1_HUMAN | 44.886 % | 442 | 1.45E-133 |
| MRP2_HUMAN | 43.984 % | 439 | 2.33E-132 |
| MRP7_HUMAN | 50.484 % | 443 | 5.36E-134 |