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- Transcript 'Cisavi.CG.ENS81.R31....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R31.524661-532081.02412.t
Possible name(s)
ALYREF; POLDIP3
Gene model
Location
R31 [524,660 / 532,081]
Amino acid sequence
Length: 425
>Cisavi.CG.ENS81.R31.524661-532081.02412.p
MYTTSWHKKQTVPDARLKLQAKTVDARLKLRKQHDKDKPIFDARQAIKAKKIPTPKAAPA
PRPRKPVTAPETHAPKSRQPVKFTTRTIRNPGAVVPLENQTLGKKLSLKSMPCGFISVTN
GSRVMMEKVTMDDSGLKVAIRNDIMKNKTPQNKKSRENSVKVDKGIKITMKNPDAKKKSY
SKPTKTNIQRKLPKKRSLPPPIPEPDEEEIPIITHESPPPRKRKPVSPAGIMYSDAITYP
KRSYVEDGPRPMNSSVNKHFFHQFQERTRLFEPLIPHIPEQIEYFPEYDVASPFEGTKIL
VSNLHPIVVEDDILELFSVLGPVRRARLIGPGKAEVVFVRRDDAILAYQKYNDRDLDGQP
MQMQLVLQERNMSTTQYSWMADITPRRTTAGADVTELDPNILQKALFKGGSTSTSARPVV
FTVKI
Nucleotide sequence
Length: 1,729
>Cisavi.CG.ENS81.R31.524661-532081.02412.t
GTTGAGGTAGTTTTAAGCTATGTATAACATTTGTAGGTTGATTTTCTGATATGTATACAA
CATCTTGGCATAAAAAGCAAACGGTGCCTGATGCACGTTTAAAACTGCAGGCAAAGACAG
TCGATGCAAGGCTTAAACTCCGGAAACAACATGACAAAGACAAACCAATATTTGATGCCA
GGCAGGCTATAAAAGCCAAAAAAATTCCAACACCCAAAGCAGCACCGGCACCTAGGCCTC
GTAAACCTGTAACAGCACCAGAAACACATGCACCAAAATCGAGGCAACCTGTAAAATTCA
CTACAAGAACAATTCGTAACCCAGGTGCTGTTGTTCCTTTGGAGAATCAAACTCTTGGAA
AGAAATTGTCCTTAAAATCCATGCCATGTGGATTTATTTCTGTCACCAATGGATCGCGGG
TCATGATGGAAAAAGTGACAATGGATGACTCTGGATTAAAGGTTGCTATTCGAAATGACA
TTATGAAGAATAAAACACCACAGAACAAAAAATCTAGAGAAAACTCTGTTAAGGTGGACA
AAGGAATTAAAATCACCATGAAAAACCCTGATGCCAAAAAAAAATCCTATTCAAAACCAA
CAAAAACAAACATACAAAGAAAGCTGCCAAAAAAGCGATCACTGCCTCCTCCAATACCTG
AACCTGATGAAGAGGAGATCCCAATAATCACACATGAAAGCCCACCACCCCGTAAACGCA
AACCAGTTTCACCTGCTGGAATAATGTACTCGGATGCAATCACATATCCCAAGCGCTCAT
ATGTTGAAGATGGTCCCAGACCTATGAATTCATCGGTGAACAAACACTTTTTTCATCAAT
TTCAAGAAAGAACACGACTGTTTGAACCGCTTATTCCGCACATTCCGGAGCAAATTGAAT
ATTTTCCCGAGTATGATGTTGCGAGTCCGTTTGAAGGCACCAAGATTCTTGTTTCAAACC
TTCACCCGATAGTTGTTGAAGATGATATTCTGGAACTATTCAGTGTTCTCGGACCTGTCC
GTCGTGCCAGGTTGATTGGTCCTGGTAAAGCAGAAGTTGTATTTGTGAGAAGAGACGATG
CAATACTAGCTTATCAGAAGTATAACGACAGAGACTTGGATGGTCAACCAATGCAAATGC
AACTTGTTTTACAAGAACGGAATATGTCCACCACTCAGTACAGTTGGATGGCCGATATTA
CACCACGACGTACCACAGCGGGTGCTGATGTCACCGAACTTGACCCAAATATCTTGCAGA
AGGCACTCTTCAAGGGAGGAAGCACCAGTACTTCAGCTAGACCCGTTGTATTCACCGTAA
AAATTTAGCACCAACAAGACTTTGATCCGCGTCAAAATTTCATTTGGTGTGTATTGTCGA
AAATACTACCAAAACAAGTTTTATTACACAGTGCAAACAATATTTTTGGTTTCATAACTT
GTGTACTACTGAAGTGTTTCCATTTGGAAACTATTTTCATTTTATGTCTTCTTTAATTAT
GTATTTGATTACAAAACTTTGATACACTAAAAGCTGCAAATTTTCTATGCTGTATGTCTT
TTTAAAGCTCAATTGATTAAAAAATTATTTTTTCATCCATGAATGTAGTAGGGTGATGGT
GCACATCGTAGTTGAATTCTCATTTAAGTTTTGATCATAATAATGATCATACGTCTTTTA
TACAATCTGTAAAAAACACTTGTGTGGCTTTCAAAAAATAAAAAAATAG
| PANTHER |
PDIP3 (IPR034785) - T[30-414] 3.7E-55 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[290-378] 1.4E-10 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[291-370] 4.16E-14 |
| CDD |
PDIP3_RRM (IPR034784) - T[297-365] 1.13451E-36 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[297-368] 11.486 |
| SMART |
RRM_dom (IPR000504) - T[298-364] 2.0E-9 |
| Pfam |
RRM_dom (IPR000504) - T[299-361] 9.3E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PDIP3_HUMAN | 44.966 % | 128 | 5.46E-33 |