- Transcript 'Cisavi.CG.ENS81.R31....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R31.713377-716716.03706.t
Possible name(s)
DDX39B
Gene model
Location
R31 [713,683 / 716,404]
Amino acid sequence
Length: 438
>Cisavi.CG.ENS81.R31.713377-716716.03706.p
MATEAEELLDYDEEEHETTQEITTEKKDAKKDVKGTYVSIHSSGFRDFLLKPELLRAIVD
CGFEHPSEVQNECIPQAVLGMDVLCQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHT
RELAFQISKEYERFSKYMPTTKVAVFFGGLPITKDQTTLKNNCPHIVVGTPGRLLALIRS
KSLNLKNVKHFILDECDKMLEQLGRLLNLKCYPPHTKTYMRRDVQEIFRLTPHEKQVMMF
SATLSKEIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVKLKDNEKNRKLFDLLDALEF
NQVVIFVKSVQRCMALAQLLKEQNFPAIDIHRAMNQEERLSRYQLFKNFDRRILVATNLF
GRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEGDAKTLNDVQDRF
EVNVTELPDEIDISAYSK
Nucleotide sequence
Length: 1,315
>Cisavi.CG.ENS81.R31.713377-716716.03706.t
ATGGCAACTGAGGCCGAAGAATTATTGGACTACGATGAAGAAGAACATGAAACCACCCAA
GAAATAACAACAGAGAAAAAAGATGCAAAAAAGGATGTCAAGGGTACCTATGTGTCGATA
CACAGCTCTGGTTTTCGTGATTTTCTACTAAAGCCAGAGTTGTTAAGGGCGATTGTAGAT
TGCGGTTTTGAGCATCCCTCTGAAGTTCAAAATGAGTGTATTCCGCAAGCTGTGCTTGGT
ATGGATGTTCTATGTCAAGCAAAATCTGGAATGGGGAAAACAGCTGTGTTCGTTCTTGCC
ACTTTGCAGCAACTGGAACCAGTGGATGGACAGGTTTCGGTTTTGGTAATGTGCCACACG
CGGGAACTTGCCTTCCAGATTAGCAAAGAATATGAACGATTTTCCAAATACATGCCCACC
ACTAAGGTTGCTGTCTTTTTTGGTGGCTTGCCAATCACAAAAGATCAAACTACACTGAAA
AACAACTGCCCCCACATCGTTGTAGGAACACCCGGGCGACTGCTTGCACTAATTCGCTCT
AAGTCTTTGAACCTGAAAAATGTGAAGCATTTCATTCTTGACGAATGTGACAAAATGCTT
GAACAATTAGGTAGGCTATTAAATTTGAAATGCTATCCACCACATACTAAAACTTATATG
CGCCGTGATGTTCAAGAGATCTTTCGTCTCACTCCCCATGAGAAGCAAGTCATGATGTTC
AGTGCAACTCTCAGCAAAGAAATTCGTCCTGTTTGCAAAAAGTTCATGCAAGATCCGATG
GAGGTGTATGTGGATGATGAAGCAAAACTAACGCTCCATGGCCTTCAACAACATTATGTT
AAACTAAAGGATAATGAAAAGAATCGAAAGCTATTTGATCTTCTGGATGCGCTAGAGTTC
AACCAGGTTGTTATATTCGTGAAATCAGTCCAGAGGTGTATGGCTTTGGCCCAGCTGTTA
AAGGAGCAGAATTTTCCAGCCATCGACATCCACCGAGCCATGAACCAAGAGGAAAGACTC
AGCAGATATCAATTGTTCAAGAACTTTGATCGACGTATACTAGTTGCAACAAATCTCTTT
GGTCGTGGTATGGATATTGAGCGAGTAAACATCGTGTTCAACTACGATATGCCAGAGGAT
TCTGATACTTACTTGCACAGGGTGGCAAGAGCAGGAAGATTTGGTACCAAAGGGCTTGCT
ATTACTTTTGTGTCAGATGAAGGAGATGCCAAAACATTGAACGATGTGCAAGACCGATTT
GAAGTCAACGTCACTGAGCTTCCTGATGAGATTGATATCTCCGCCTATAGTAAGG
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[43-71] 9.45 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[62-278] 1.1E-48 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[68-248] 2.2E-36 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[74-262] 26.881 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[112-407] 2.81E-61 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[274-435] 21.334 |
| CDD |
Helicase_C (IPR001650) - T[277-403] 1.66432E-36 |
| Pfam |
Helicase_C (IPR001650) - T[287-395] 3.6E-23 |
| SMART |
Helicase_C (IPR001650) - T[314-395] 1.5E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IF4A3_HUMAN | 35 % | 243 | 3.27E-76 |
| DX39B_HUMAN | 84.186 % | 744 | 0 |
| DX39A_HUMAN | 82.558 % | 728 | 0 |