- Transcript 'Cisavi.CG.ENS81.R335...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R335.67472-128609.11977.t
Possible name(s)
HERC1; HERC2
Gene model
Location
R335 [67,471 / 82,053]
Amino acid sequence
Length: 1,175
>Cisavi.CG.ENS81.R335.67472-128609.11977.p
SAHPYPDDDYSEGVVKIKGREWSDWSQPLKLPTNEFHWKFKSDGSVNGWGWKFTAQPTVP
LSGLTTDDITMSDRRVFDNPSFPFLIRLFEIFRTADHQSESWIHLKSSVVNEVVTSFTSC
LRYTCFGTDQRIWLLKTIKWMVTHRRPISKTLFEGSHSSGTSHVTQYNKLLPELTQMLKT
QYDYEEPLVRSGKQVLYSPFFSELSTLCCEIKCDEVLSSSELQMAGFLQYCLAYRTMKAL
FDRTTFPPKFLEQVSSKIEEVCGEDEDRSLNQHENNMVFTQQIDEQLVMWINKRPDDWTL
SWAGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCASVAALQPVQLVGGEQTLFAVTGEGRV
YATGYGAGGRLGIGSNDSVSIPTLIESIQHVQITQVSVNAGGKHILALSNEGEVYSWGEG
VDGKLGHGNRTALDHPRIIESLRGDHIIRVATGGSHSAAINSAGGLYTWGKGRYGRLGHE
DSEDQLRPKLVAALKDNVVVDVACGNGDAQTLCITGGMGATNVVWSWGDGDYGKLGRGGS
DGCKVPAIIDTLVGKNITKVACGSQFSVALSKSGAVFTWGKGDYYRLGHGSDEHVRRPKV
VEALRGLKVVEVSVGSLHCIAAVENGDVYTWGDNDEGQIGDGSTQARQMPRLVAALQGHH
ITHVACGSAHTVAWSLPSESHKVDKRRRTGAKLPEHVPLEYNLLQNIPFTELRNRLVVLT
QFSDLLCSVIPFLPLHQAPCDVTDTTDTPLPIDQLRSMLVSSGKELFFKKVVQSSMIRDK
QHGPIIEINRIQVKRHREKGGLAGPNGSKSVFGQAFQKMETLLPDSVLLPHRIWKVKFLG
ESVDDCGGGYSESITEICDELQNGSVPLLSITPNGRDESGANRDCFIFNSAASSDVHIRM
FKFLGLLIGIAMRTGSPLSINLAEPVWKQLASIKPCLKDITEIDKHFVPKSMYIRDCEPH
ELDNMQMPFTTYSACGKEISLSSTHQTVNAQNRNEYIRLAIQYRLHEFDQMVAAVREGMA
CVVPVPLLSLFTASELETTVCGSPDIPLHLLKSVSTCKGVPPNDELIQWFWETLETFTDE
ERSLFLRFVWGRTRLPRSIADFRGRDFVIQVPDKYHPPDHYLPESYTCFFMLKLPRYSCK
PVLAEKLKYAIHFCKSIDTDDYARIDILDFEAAND
Nucleotide sequence
Length: 3,999
>Cisavi.CG.ENS81.R335.67472-128609.11977.t
AGTGCTCACCCCTACCCCGACGATGACTATTCAGAGGGGGTGGTCAAGATTAAAGGCAGG
GAATGGTCTGATTGGTCACAGCCACTGAAACTACCGACCAATGAATTTCACTGGAAGTTT
AAAAGTGATGGATCAGTCAATGGTTGGGGGTGGAAATTCACGGCTCAACCAACAGTGCCA
CTTAGTGGCCTAACAACTGATGACATCACAATGAGCGATCGACGAGTGTTCGACAACCCA
TCATTCCCGTTCCTGATTCGTCTGTTTGAAATATTCCGCACCGCCGACCACCAATCAGAG
AGCTGGATTCATTTGAAGTCGTCGGTTGTAAACGAAGTTGTCACGTCGTTCACGTCGTGT
CTCCGATATACTTGCTTCGGCACAGACCAACGGATATGGTTACTGAAGACCATCAAATGG
ATGGTCACGCATCGCCGACCAATTTCGAAAACCCTGTTTGAAGGAAGTCACTCAAGTGGA
ACAAGTCATGTGACCCAATACAATAAACTGCTACCAGAGTTAACTCAGATGCTCAAGACT
CAATATGATTATGAAGAACCACTGGTTAGAAGTGGGAAGCAAGTGTTATACAGTCCATTC
TTTTCTGAATTGTCGACTTTATGTTGTGAGATCAAATGCGATGAAGTTCTGTCAAGCAGT
GAGCTTCAGATGGCAGGTTTCCTACAATACTGCCTTGCTTATAGGACCATGAAGGCTTTG
TTTGATCGCACCACATTTCCACCCAAGTTTTTAGAGCAAGTGAGTAGCAAGATAGAGGAA
GTGTGTGGTGAGGATGAGGACCGCAGCTTGAATCAGCATGAAAACAACATGGTGTTCACA
CAACAGATTGATGAGCAACTGGTGATGTGGATCAATAAACGGCCGGACGATTGGACGTTA
TCGTGGGCTGGCAGTGGGTCAATATTCGGGTGGGGTCACAACCACCGCGGTCAATTAGGT
GGTCCAGAGGGGGCCAAAGTGAAGATCCCAATCCCATGCGCGTCAGTGGCCGCTCTGCAG
CCCGTGCAGTTGGTTGGGGGGGAGCAGACCCTCTTCGCGGTGACGGGGGAGGGAAGGGTG
TACGCCACGGGGTATGGGGCGGGGGGAAGACTGGGTATCGGAAGCAACGATTCCGTGTCC
ATCCCCACGCTCATCGAGTCAATCCAGCATGTTCAGATCACACAGGTTTCAGTGAACGCA
GGCGGAAAGCATATCCTTGCGCTTTCCAACGAGGGTGAGGTGTATAGCTGGGGTGAAGGG
GTGGATGGCAAGCTGGGTCACGGGAATCGAACAGCGTTGGATCACCCTCGAATCATCGAG
AGCTTGAGGGGGGACCATATCATCCGAGTGGCAACCGGGGGGTCGCACAGCGCGGCCATC
AACAGTGCGGGGGGGTTGTACACGTGGGGCAAGGGTCGGTACGGTCGATTGGGGCACGAG
GATAGCGAGGACCAGCTCCGACCTAAACTGGTGGCTGCACTGAAGGACAACGTGGTTGTA
GATGTGGCTTGTGGGAACGGAGATGCTCAAACCCTCTGTATCACTGGGGGGATGGGGGCC
ACCAATGTGGTGTGGTCGTGGGGGGACGGCGATTATGGGAAGTTGGGGAGAGGGGGCAGT
GATGGATGCAAGGTCCCGGCCATCATAGACACACTGGTTGGGAAGAATATCACCAAAGTG
GCGTGCGGCAGTCAGTTCTCTGTGGCGCTCTCCAAATCTGGTGCCGTCTTCACATGGGGA
AAAGGGGATTATTATCGTCTGGGTCATGGTTCAGATGAACATGTACGTCGACCTAAAGTC
GTTGAAGCGTTACGTGGGCTGAAGGTGGTGGAAGTGTCGGTCGGATCGTTGCACTGCATA
GCCGCTGTCGAGAACGGTGATGTGTATACGTGGGGGGATAATGATGAAGGACAGATTGGT
GACGGCTCCACACAGGCGCGGCAGATGCCACGCTTGGTTGCCGCGCTGCAAGGCCACCAC
ATCACACACGTGGCGTGTGGTTCGGCGCACACCGTGGCATGGTCCCTGCCGTCCGAATCG
CACAAGGTGGACAAGCGGAGACGCACAGGGGCCAAACTGCCCGAACACGTCCCGCTCGAA
TACAACTTGCTACAAAACATCCCGTTCACCGAACTACGCAACCGACTTGTGGTACTCACA
CAGTTTTCAGATTTGCTTTGTTCCGTCATTCCTTTCTTGCCGCTCCACCAAGCACCCTGT
GATGTCACAGACACCACTGACACGCCCCTTCCAATCGACCAATTACGTAGCATGCTCGTG
TCGTCGGGAAAGGAATTGTTCTTCAAGAAAGTTGTCCAGTCATCGATGATTCGTGATAAA
CAACATGGTCCAATCATAGAGATCAATCGGATTCAGGTGAAACGGCACAGGGAAAAAGGT
GGACTCGCAGGCCCCAACGGTTCCAAATCTGTGTTCGGCCAAGCATTTCAAAAGATGGAG
ACCCTCTTACCGGACAGTGTGTTACTTCCACACAGAATATGGAAGGTGAAATTCCTAGGT
GAATCGGTGGACGACTGCGGGGGAGGCTACAGCGAGTCGATCACAGAAATATGCGACGAG
CTACAAAACGGGTCGGTTCCCCTGCTCTCTATCACTCCTAATGGCCGGGATGAGTCAGGA
GCAAACAGGGATTGTTTCATCTTCAACTCGGCCGCCTCCAGTGATGTCCACATCAGGATG
TTTAAATTCCTGGGACTGCTGATTGGGATTGCCATGCGAACTGGAAGTCCTTTGAGCATC
AATCTGGCTGAACCAGTGTGGAAACAATTGGCTTCTATCAAGCCTTGTTTGAAAGACATC
ACAGAGATTGACAAACACTTCGTACCCAAGTCGATGTACATACGTGATTGTGAGCCGCAT
GAACTGGATAACATGCAGATGCCGTTCACTACCTACTCTGCGTGTGGGAAGGAGATTTCG
TTAAGTTCAACTCACCAAACTGTAAATGCCCAAAACCGCAACGAATACATCAGACTTGCA
ATACAATATAGGTTGCATGAATTTGACCAGATGGTGGCAGCAGTGAGGGAGGGAATGGCT
TGTGTGGTGCCGGTGCCATTATTATCATTGTTCACTGCGAGTGAACTTGAAACCACGGTA
TGTGGTAGCCCCGACATTCCCCTCCATCTACTCAAATCGGTTTCCACTTGCAAGGGGGTT
CCCCCAAACGACGAACTGATCCAGTGGTTCTGGGAGACGCTGGAGACGTTCACAGATGAG
GAGCGATCTTTGTTCCTCCGGTTTGTCTGGGGGAGAACCAGATTGCCGAGGTCCATCGCT
GACTTCAGAGGAAGGGACTTCGTGATACAGGTACCGGACAAGTACCACCCCCCAGACCAC
TACCTCCCCGAGTCATATACATGCTTCTTCATGCTCAAGCTACCACGCTACAGTTGCAAG
CCGGTGTTGGCGGAGAAGTTAAAATACGCGATCCACTTCTGCAAGTCCATCGACACTGAC
GACTACGCAAGGATCGACATTCTCGATTTCGAAGCCGCCAACGATTATGAGCTCATCAGC
CTTCGAGGGACTCAGGATCGCCATCGTGTGGTCGGTTCATACGGTGTCATCAATTTCTCG
AGCTCCGACGAATCGATACCCCACGGGGAACCACCCGGGTTATTCGGGGGCTCGACTTCG
AGCGAAATTGAGAGGGATTATGAAATGCTGGTGTAAACGTTAATAGTATTTAGGGCGGGG
TAACTCATTATCGTAGGTAATTAATAGTTGTCGTTTATATGTTACGTGTATAAACGTGTT
CGTCATAACAAAATTCCCCTGAACTGTGATTTGAACTTGAGGTTTACTTTCAGAGTAAAT
TTTAGCACAATTTTTAAGTCCAATTTTTTTTGATCCATGTACCAACACTTAGTATACAAA
TTGAAATCTTTGTTGAAATGGTATTGTTGAAAAGTTGCATTTTATCTGTTGTTATATGCG
GTTTGTCATTTCGTGTCTTCGAACAACAGAGAATTTTTC
| SUPERFAMILY |
RCC1/BLIP-II (IPR009091) - T[299-677] 1.31E-92 |
| ProSiteProfiles |
Reg_chr_condens (IPR000408) - T[306-357] 10.986 - T[358-411] 13.921 - T[412-463] 15.609 - T[464-515] 13.78 - T[522-573] 13.881 - T[574-625] 15.147 - T[626-677] 16.253 |
| PRINTS |
Reg_chr_condens (IPR000408) - T[307-323] 4.6E-15 - T[360-376] 4.6E-15 - T[412-428] 4.6E-15 - T[450-466] 4.6E-15 - T[466-480] 4.6E-15 - T[563-581] 4.6E-15 - T[621-642] 4.6E-15 |
| Gene3D |
RCC1/BLIP-II (IPR009091) - T[307-678] 9.8E-143 |
| Pfam |
Reg_chr_condens (IPR000408) - T[357-408] 2.5E-7 - T[411-460] 5.7E-12 - T[464-506] 3.3E-11 - T[524-570] 4.0E-12 - T[573-621] 1.9E-11 - T[625-673] 1.5E-14 |
| ProSitePatterns |
Reg_chr_condens (IPR000408) - T[450-460] . |
| CDD |
HECT_dom (IPR000569) - T[789-1158] 3.23993E-102 |
| SMART |
HECT_dom (IPR000569) - T[822-1165] 2.1E-46 |
| SUPERFAMILY |
Hect_E3_ubiquitin_ligase (IPR035983) - T[822-1154] 8.89E-84 |
| ProSiteProfiles |
HECT_dom (IPR000569) - T[825-1160] 44.725 |
| Pfam |
HECT_dom (IPR000569) - T[856-1155] 4.8E-56 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HERC2_HUMAN | 58.395 % | 1414 | 0 |
| HERC1_HUMAN | 36.887 % | 651 | 0 |
| HECD3_HUMAN | 30.785 % | 177 | 2.13E-45 |