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- Transcript 'Cisavi.CG.ENS81.R347...' >
- Transcript 'Cisavi.CG.ENS81.R347...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R347.25866-52542.06873.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
R347 [25,865 / 29,190]
Amino acid sequence
Length: 233
>Cisavi.CG.ENS81.R347.25866-52542.06873.p
MSERYSFSLTTFSPSGKLVQIEYALNAVTAGSPSVGIKAQDGVVMATEKKQKSILYDEHS
IHKVEAVTEKIGIVYSGMGPDYRVLLTRARKIAQMYYRQYQESIPTTQLVQRIASVMQEY
TQSGGVRPFGVSLLICGWDNNRPYLFQCDPSGAYFAWKATAMGKNHLNGKSFLEKRYNEE
LQLDDAVHTAILTLKESFEGQMTEDNIEVGIANADGFHRLSPSEVKDYLASIA
Nucleotide sequence
Length: 896
>Cisavi.CG.ENS81.R347.25866-52542.06873.t
ACGAATTGTGCTGATATCATTATATTCTGTTTAAAGGTTTATTCAAACATATTACACTTA
ATATTTAAAATATTATTCTAAAATGTCGGAAAGATACAGCTTTTCACTCACCACATTCAG
CCCAAGTGGCAAATTGGTTCAGATCGAATACGCGTTGAACGCTGTGACTGCTGGCTCCCC
ATCTGTTGGTATCAAAGCACAGGATGGTGTTGTTATGGCAACGGAGAAGAAGCAGAAATC
CATCTTGTATGACGAACACAGCATCCATAAAGTGGAAGCTGTGACTGAAAAAATTGGAAT
CGTTTATAGTGGAATGGGCCCTGATTATAGAGTGCTGCTTACAAGGGCTCGTAAGATTGC
TCAGATGTATTACCGACAATATCAAGAAAGCATTCCTACCACTCAACTTGTTCAACGTAT
TGCTTCAGTTATGCAAGAATATACACAATCTGGAGGTGTTCGGCCGTTTGGAGTATCCTT
ACTCATTTGTGGTTGGGACAACAATAGACCTTATCTTTTTCAATGTGATCCATCGGGAGC
ATACTTTGCATGGAAGGCAACTGCAATGGGAAAGAATCATTTAAATGGAAAGTCTTTTCT
TGAAAAGAGATACAATGAAGAGCTTCAGTTAGATGATGCAGTGCATACAGCTATATTAAC
ATTGAAGGAATCATTTGAAGGGCAGATGACTGAGGACAATATAGAAGTTGGTATCGCAAA
TGCAGATGGCTTTCATAGACTCTCCCCATCTGAGGTAAAGGACTACCTCGCATCTATTGC
TTGAACACTTTGGACATCCAGCTGAGAAGTTTAAATTGTATGTCGTTTGTAGAGCAGCTC
TTTGTTTATTGAGTTCCAATAAAAAATAAATTTGCTGTGTATTAAAAAATAAATAA
| Gene3D |
Ntn_hydrolases_N (IPR029055) - T[1-233] 2.6E-85 |
| PANTHER |
Proteasome_subunit_alpha2 (IPR034644) - T[3-232] 7.6E-119 |
| SUPERFAMILY |
Ntn_hydrolases_N (IPR029055) - T[4-232] 1.59E-78 |
| ProSitePatterns |
Proteasome_asu_N (IPR000426) - T[5-27] . |
| SMART |
Proteasome_asu_N (IPR000426) - T[5-27] 2.1E-7 |
| Pfam |
Proteasome_asu_N (IPR000426) - T[5-27] 3.7E-10 |
| ProSiteProfiles |
Proteasome_alpha-type (IPR023332) - T[20-229] 77.704 |
| Pfam |
Proteasome_sua/b (IPR001353) - T[29-211] 2.9E-59 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PSA2_HUMAN | 81.624 % | 405 | 1.35E-145 |
| PSA7_HUMAN | 37.768 % | 163 | 4.44E-50 |
| PSA4_HUMAN | 40.654 % | 156 | 2.9E-47 |