- Transcript 'Cisavi.CG.ENS81.R347...' >
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- Transcript 'Cisavi.CG.ENS81.R347...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R347.25866-52542.06875.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
R347 [29,033 / 47,066]
Amino acid sequence
Length: 378
>Cisavi.CG.ENS81.R347.25866-52542.06875.p
MSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVMDAGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
TKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,874
>Cisavi.CG.ENS81.R347.25866-52542.06875.t
TCAATACCAGTTTAACATCTACTTAAGTATTCCAAGCAAACTTAAATCATGTCGGATTCC
GAAGAAGATCAAACCGCTTTGGTGTGCGATAATGGATCAGGATTAGTAAAGTCAGGTTTT
GCTGGAGACGATGCACCTCGAGCCGTTTTCCCATCTATCGTTGGACGCCCGCGTCATCAG
GGTGTCATGGTCGGCATGGGCCAAAAAGACAGCTACGTTGGTGACGAAGCACAGAGCAAG
AGAGGCATCTTAACTCTGAAATACCCGATCGAGCACGGTATCATCACTAACTGGGATGAT
ATGGAGAAGATCTGGCATCACACTTTCTACAACGAACTCCGAGTTGCACCAGAGGAACAC
CCAACTCTGCTTACTGAAGCTCCACTTAACCCCAAAGCAAATCGAGAAAAGATGACACAA
ATTATGTTCGAAACATTCAACGTACCAGCTATGTACGTCGCCATTCAGGCCGTGCTCTCT
CTCTATGCCTCTGGACGAACTACTGGTATCGTTATGGATGCCGGAGACGGTGTTTCCCAC
AACGTTCCAATCTACGAAGGTTATGCACTCCCGCACGCCATCGCCCGGTTGGATTTGGCC
GGACGAGATCTCACCGATTATTTAATGAAAATCTTAACCGAAAGAGGCTATTCCTTTGTC
ACTACTGCTGAGCGTGAAATTGTTCGAGACATCAAAGAAAAACTCTGCTACGTGGCACTC
GACTTCGAGCAGGAGATGGCGACCGCTGCCTCATCTACATCTCTCGAGAAGAGTTATGAG
CTTCCTGACGGTCAAGTCATCACCATCGGAAACGAAAGATTCAGATGCCCGGAAACACTC
TTCCAACCTTCATTCATAGGCATGGAATCTGCTGGTATTCATGAAACAACTTACAACTCC
ATCATGAAGTGTGACATTGATATTCGAAAGGACCTCTATGCAAACAACGTACTCTCCGGA
GGTACCACCATGTATCCTGGTATCGCTGACAGAATGCAGAAAGAGATTACTGCTCTCGCT
CCAAGCACCATGAAGATCAAGATTATCGCTCCACCAGAGAGGAAATACTCCGTTTGGATC
GGAGGATCCATCCTTGCTTCACTCTCCACCTTCCAACAGATGTGGATCACCAAGCAAGAA
TACGACGAAGCTGGCCCATCTATTGTTCATCGAAAATGCTTCTAAATATAAAAAAACTGT
TGTTGATGCAGCATATGTTTATTTATTAAGTCAAGTTTTCACTCTAAACTTTTGAACAAA
TTGTTTTCATACATAAATAAACTAACTAGCAAATTGTACCAATTACCACTATACCATTTC
GAAGTAGGGTATCTAGAATTATTGGTTACGCCTTAGACAATATGTTTAAAGAATTGGGGT
ACAGTGTAGCCGCTACACTAATCACCAATTGCGGATACTGGATGTATTGGGGAATACCCT
GATGTATATCTAGCATTTTTCTGTGTAACGGAGCACCATTTTAAGAGAATGTTGATTTAA
CAGTCTCTACGGATCTTTATCTGTTGAATCCCATATTTTATATAGAGAGAACATGGATTA
AATGGTATAACGATAAATGAAAATTATACTCTTATATATATTTGTACAAAACGTACTATT
CGTGTTATAATTTTATAGTTAAGGTTTTGACCAAGCTGTTGATCTAAAATTCAACATTCT
AGGGAATTGGTACTCTCGTGAACGTGACAAAGTGCATACGAATTGTGCTGATATCATTAT
ATTCTGTTTAAAGGTTTATTCAAACATATTACACTTAATATTTAAAATATTATTCTAAAA
TGTCGGAAAGATACAGCTTTTCACTCACCACATTCAGGTAAGCAAAGCGATTAGTCGCAT
TTTCTTACATTTTT
| PANTHER |
Actin (IPR004000) - T[5-377] 2.0E-266 |
| Pfam |
Actin (IPR004000) - T[7-378] 3.5E-147 |
| SMART |
Actin (IPR004000) - T[8-378] 2.0E-232 |
| PRINTS |
Actin (IPR004000) - T[29-38] 2.6E-57 - T[52-63] 2.6E-57 - T[64-86] 2.6E-57 - T[118-131] 2.6E-57 - T[143-162] 2.6E-57 - T[239-255] 2.6E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . - T[359-367] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.059 % | 766 | 0 |
| ACTS_HUMAN | 97.059 % | 766 | 0 |
| ACTC_HUMAN | 96.825 % | 766 | 0 |