- Transcript 'Cisavi.CG.ENS81.R347...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Cisavi.CG.ENS81.R347...' >
- Transcript 'Cisavi.CG.ENS81.R347...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R347.25866-52542.06877.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
R347 [45,277 / 52,542]
Amino acid sequence
Length: 378
>Cisavi.CG.ENS81.R347.25866-52542.06877.p
MSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVMDAGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
TKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,449
>Cisavi.CG.ENS81.R347.25866-52542.06877.t
CATCATTCCCAGTTAAACATCCACCCAAGTATTCCAAGCAAACTTAAATCATGTCGGATT
CCGAAGAAGATCAAACCGCTTTAGTGTGCGATAATGGATCAGGATTAGTGAAGTCAGGTT
TTGCTGGAGATGACGCACCTCGAGCCGTTTTCCCATCTATCGTTGGACGCCCGCGTCATC
AGGGTGTCATGGTCGGTATGGGCCAAAAAGACAGCTACGTTGGTGACGAAGCACAGAGCA
AGAGGGGCATCTTAACTCTGAAATACCCGATCGAGCACGGTATCATCACTAACTGGGATG
ATATGGAGAAGATCTGGCATCACACTTTCTACAACGAACTCCGAGTTGCACCAGAGGAAC
ACCCAACTCTGCTTACTGAAGCTCCACTTAACCCCAAAGCAAATCGAGAAAAGATGACAC
AAATTATGTTCGAAACATTCAACGTACCAGCTATGTACGTCGCCATTCAGGCCGTGCTCT
CTCTCTATGCCTCTGGACGAACTACAGGTATCGTTATGGATGCCGGAGACGGTGTTTCCC
ACAACGTTCCAATCTACGAAGGTTATGCACTCCCGCACGCCATCGCTCGGTTGGATTTGG
CCGGACGAGATCTTACCGATTACTTGATGAAAATCTTAACCGAAAGAGGCTATTCCTTTG
TCACTACTGCTGAGCGTGAAATCGTTCGAGACATCAAAGAAAAACTCTGCTACGTGGCAC
TCGACTTCGAGCAGGAGATGGCGACCGCTGCCTCATCTACATCTCTCGAGAAGAGCTATG
AGCTTCCTGACGGTCAAGTCATCACCATCGGAAACGAACGATTCAGATGCCCGGAAACAC
TCTTCCAACCTTCATTCATAGGCATGGAATCGGCCGGTATTCATGAAACAACTTACAACT
CCATCATGAAGTGTGACATTGATATTCGAAAGGACCTCTATGCAAACAACGTACTCTCCG
GAGGTACCACCATGTATCCTGGTATCGCTGACAGAATGCAGAAAGAGATTACTGCTCTCG
CTCCAAGCACCATGAAGATCAAGATTATCGCTCCACCAGAGAGGAAATACTCAGTCTGGA
TCGGAGGATCCATCCTTGCTTCACTCTCCACCTTCCAACAGATGTGGATCACCAAGCAAG
AATACGACGAAGCTGGCCCATCTATTGTTCACCGAAAATGCTTTTAAATAATAACCAAAC
AAACTGTGGTATATATTGCAAATTTTTATTTAATTTCGACTAAATAAATTTTGTCAAATT
TAGGTATTTTTTTTAAAAATAAAATATTTTCGGTTCCGAATCTTAAATTGTTTATAAAAA
TATCAAAGGAGTAGATATATCTTACTTGGCTGACACATTTAGACTTTGGAGCATAAAAAG
TTTTTACCTCTGTTCTATGATATTAATAATTAAGATAGCTTAAACAAGAATGCCTCACTA
CCGTACATG
| PANTHER |
Actin (IPR004000) - T[5-377] 2.0E-266 |
| Pfam |
Actin (IPR004000) - T[7-378] 3.5E-147 |
| SMART |
Actin (IPR004000) - T[8-378] 2.0E-232 |
| PRINTS |
Actin (IPR004000) - T[29-38] 2.6E-57 - T[52-63] 2.6E-57 - T[64-86] 2.6E-57 - T[118-131] 2.6E-57 - T[143-162] 2.6E-57 - T[239-255] 2.6E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . - T[359-367] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.059 % | 766 | 0 |
| ACTS_HUMAN | 97.059 % | 766 | 0 |
| ACTC_HUMAN | 96.825 % | 766 | 0 |