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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C10.87.v3....' > 
  2. Transcript 'Cisavi.CG.ENS81.R281...' > 
  3. Transcript 'Moocul.CG.ELv1_2.S94...' > 
  4. Transcript 'KH2012:KH.C12.229.v1...' > 
  5. Transcript 'Cisavi.CG.ENS81.R37....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R37.2783473-2787738.14010.t

Possible name(s)

HDAC4; HDAC7; HDAC9

Gene model

Cisavi.CG.ENS81.R37.2783473-2787738

Location

R37 [2,783,472 / 2,786,901]

Sequences

Amino acid sequence

Length: 267

>Cisavi.CG.ENS81.R37.2783473-2787738.14010.p
MGYNVNIGFSGGLDPPMGDADYLAVFRSIVLPIARKFNPHFVLVSCGFSAAGGHPSTLGG
YNVTPNCFGYLTRSLSELAEGKIVLALEGGFELEPLCNCAEACVQTLLGKEEYSSLSRDT
LERRPSDNAVRAINGVIAIQEKHWKGLDVSSGEVSHIDYMRMTRENETCVAMASLSVENK
RSESKAESTVESDSRTQPVDLSNNRCLPTVGNSDDALYIDETPVGGSLSADSSPLDVVGL
STPSSPAAKQPETMEMTTNEQEPMSDV

Nucleotide sequence

Length: 1,150

>Cisavi.CG.ENS81.R37.2783473-2787738.14010.t
CTGGGACGTTCACCACTGCAACGGAACGCAGAACATCTTCTACGATGACCCGAGTGTGCT
CGTGATATCCGTGCATCGGTATGACGATGGAAACTTCTTTCCCGGCACTGGTGCAGTAAA
CGAGTGTGGCAGCGGACCCGGTATGGGGTACAACGTGAACATCGGGTTCAGTGGGGGGTT
GGATCCCCCGATGGGCGACGCAGATTACCTCGCCGTGTTCCGATCCATCGTGCTTCCGAT
CGCTCGCAAGTTCAACCCTCATTTCGTCCTCGTGTCATGCGGATTTTCGGCCGCTGGAGG
GCACCCTTCGACGCTAGGGGGCTACAATGTCACCCCGAACTGTTTCGGCTACTTGACCCG
GTCGCTCTCAGAGCTAGCGGAAGGGAAGATAGTCCTGGCACTAGAGGGCGGGTTCGAATT
AGAGCCGCTGTGCAATTGCGCGGAGGCATGCGTGCAAACGTTGCTTGGGAAGGAAGAATA
CTCGAGTCTATCGAGAGACACGTTGGAAAGAAGGCCGTCTGATAACGCGGTCCGAGCTAT
CAACGGGGTGATCGCTATCCAAGAGAAACACTGGAAGGGATTGGACGTTTCATCTGGTGA
AGTGTCTCACATCGACTACATGAGAATGACGCGTGAAAATGAGACGTGTGTCGCAATGGC
GTCACTTAGTGTCGAGAATAAGAGATCAGAATCAAAGGCTGAATCGACTGTGGAATCGGA
TTCCCGTACACAACCCGTAGACTTGTCTAATAACCGCTGCCTCCCAACTGTCGGGAATTC
CGACGACGCGCTCTACATCGATGAAACGCCCGTCGGCGGATCGCTGTCCGCGGATTCGTC
GCCGCTAGATGTCGTCGGCCTCTCCACGCCCTCTTCCCCAGCAGCTAAACAGCCAGAAAC
GATGGAGATGACGACGAACGAACAAGAGCCCATGAGCGATGTGTGATCGCCGGACGAACT
CTGACTTTGTATCCGCGCCGAGCGTTGTCGAGGGTGGCGCGTCGTCTCGTTATGTGCAAT
CCGTTCGCGCGTCACAGTCTAAAGTTGCAATGCCCCGACGACGGGTAGGAATAGTGGTAG
TCACGGACGAACACTGTGTATAAAGCAAATCGTCGTCTGCCGGGGCGTCGCGCGCGACCG
AGTCCGGCAC

InterProScan

PANTHER
His_deacetylse (IPR000286) - T[1-144] 5.6E-83
Gene3D
His_deacetylse_dom_sf (IPR037138) - T[1-172] 1.6E-53
SUPERFAMILY
Ureohydrolase_dom_sf (IPR023696) - T[2-147] 4.7E-30
Pfam
His_deacetylse_dom (IPR023801) - T[2-107] 3.8E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HDAC4_HUMAN 51.064 % 191 2.41E-55
HDAC5_HUMAN 49.451 % 169 6.81E-48
HDAC7_HUMAN 44.828 % 174 2.28E-49