- Transcript 'Cisavi.CG.ENS81.R132...' >
- Transcript 'KH2012:KH.C12.396.v1...' >
- Transcript 'Cisavi.CG.ENS81.R41....' >
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- Transcript 'Cisavi.CG.ENS81.R41....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R41.1161512-1222474.11118.t
Possible name(s)
FER1L6; MYOF; OTOF
Gene model
Location
R41 [1,161,511 / 1,222,474]
Amino acid sequence
Length: 1,982
>Cisavi.CG.ENS81.R41.1161512-1222474.11118.p
MSLEVRIFNVAGLKGKGSRNARITFRGHSYSTRTIEDCENEALFNEVFDWPVASPIEDRE
MISIDVFNYNKVFSNRLIGRFQMVLQQVVKDGEISLEESLLDSNNTALKTTISIQIKYLA
PDGTVGNWAIEDFQPQRNMSDVMSINNMDDSNPARPLTGQGLVRFRMLAIKATAARQIAR
QASIAGSQEGSEHPSTPTREPRILLNQSNPALDNISVVSLTVMDQPVTNRRSKPETKFES
AALKLHDFQVSVTVIEARQLSGTNMDPVVMVQLGDDKKYTTQKESTNCPYYNEVFVFDYH
LPRQVVFDKIVTFSVIHSRNLLRSGTLVGKFKMDLGTVYANPDHNFSRKWAVLTDPDDLN
TGPKGYLKVDISVVGKGDSIKIPKINEEEEDDIENNLLLPEGVQAERQRARFIFKIYQAD
GLPKMNTSITEKLKTVLQGEAKDLVDPYVEITFCDQKGRTSVRKNSYEPCWNEQIIFTEL
FPPLCKRIKVQIRDKDNINNTVIGTTYISLDKISNSGDRGFLPTFGPTYVNMYGSPRNYT
MVNEHSDLNEGLGEGVAFRCRLLLALSVELVNINASDGQGSSDVEVEYIPALSELGAGKM
DEFFLFGSFLEANMIDRTMADKPVTFEVTIGNFGNDIDGANLSRKKRMSDGSEDSLEDTD
DESQSLLKGSVTDDPTIRPLTPPTRPLTSDKYYYHMPFFENKPCVYLTSYWHDHKRRLYN
SNIMHRVADKLDEGLQDVQEMLKTSHERPDRRLRGVAEELTNGCASYIRLVKGTGGMGAG
RTRLDRERNKLCLRDVEYIGKEAKKVKAMVKPSVLKENLSKMKSLHSKLKGLCDDPQHSI
PDVFIWMLSGPKRVAYARIAARQILHSVREEECGEHCGKIQTLFLRLPGKKSLGLSGWSI
QAKVDIYFWFGLAKNKRDFLKGLPQGYKAIRAGNSLKAPPKTLNYPDRLQFELRAHMYQA
RGLLAADDTGLSDPFAKVIFSTHTDTTQVIEETLSPTWDQTLIMPNITLFGRAEELRDDP
PIIIIEVFDQDTVGKNEYIGRTIAKPVVKMSHERYEEPRFPSQLDWYQMYRGMTKAGEIL
AAFELLQIKGKDQIESTKVTEAIQTSQGHKFTVPKGIRPLLAKHRIEVLFWGLRDLKRVQ
LISVDRPRVDIEIAGRCVSSCLINNYKKNPNFAEPVKFIEDVDLPEVEYWCPPISITCID
CRAFGRSVLVGTHIISNISKFVFRPPDKSKIYTANVINVLTGNLIPGVPRIKKNGEVSTE
TNDVVVNINDTPTLPPSGMVEIKLEVDEEKKTKEDEEDPLDEATLDWWSKYFASLETLNE
EKSKMDEANIQDVYNDDEDQESILSIFLPPEDQHKYTASSQIKKIKQAKKSLGAPVRKWK
HKKLPIDELKIYDTELENSNEFSGFNDLLNSFDLYRGKREDLADDITDQKRIVGNFKGAF
KIYRHPLPHYVEQPDPQYGMFKGLPSNEPIHVLVRVYIIRATDLHPTDPNGKSDPYIVIS
LGENKVNDKENYISKQLNPTFGKAFDFEATFPMESILNVQIYDWDLLSADDLIGETKIDL
ENRFYSKHRSLCGVAEKYAIFGYNQWRDPMKPSEILKKLCKELKLDGPHFMPGKVRVGNK
TFQGAIELEDENGHKKPTEEHVALVALRNWEEIPKVGCKLVPEHVETRSLYNSEKPGIEQ
GRVELWVDMFPMDMPLPGPPVDVSPRKPKGFQLRVIIWNTDEVLLQDDDFFTGEKASDIY
LKGWLLGDDKQETDIHYRSLTGEGNFNWRFIYPFDYLVAEEKCVVTKKESMFSWDETEFK
IPPRLNLQVWDADHFSADDFLGSLTLDLTRLPRGAKSANKCSLNMAAEDDDSSNVPMISI
FKQRRIKGLGWPFTAKNDQDELGNHSTFGGKVEAEISLLTAEEAEKNPAGYGRDEPDPLE
KPNRPDTSFVWFMNPLKSLRYLICARFKWLIIKVFIALLLIALLVLFIYSSPSWIMKKIV
GA
Nucleotide sequence
Length: 5,949
>Cisavi.CG.ENS81.R41.1161512-1222474.11118.t
ATGTCGCTAGAAGTTCGAATTTTCAACGTTGCTGGATTAAAGGGCAAAGGATCAAGAAAC
GCACGGATAACTTTTAGAGGTCATTCCTACAGCACGCGAACCATCGAAGATTGCGAAAAT
GAAGCACTCTTCAATGAGGTTTTCGACTGGCCGGTTGCAAGTCCAATCGAAGATCGAGAG
ATGATATCTATAGATGTCTTCAATTACAACAAGGTGTTTTCAAACAGGTTGATCGGTCGT
TTCCAGATGGTACTTCAGCAAGTTGTTAAAGACGGAGAAATCTCTCTGGAAGAATCACTT
TTGGACTCAAACAACACTGCATTAAAGACGACAATCAGCATACAGATCAAGTACCTTGCC
CCTGATGGCACAGTTGGCAACTGGGCGATTGAGGATTTTCAGCCTCAACGTAACATGAGC
GACGTCATGAGCATAAACAATATGGATGACTCCAACCCTGCAAGGCCTTTGACTGGCCAA
GGACTCGTCAGGTTCCGAATGCTGGCTATTAAAGCTACAGCAGCACGTCAGATTGCCCGT
CAAGCCTCGATCGCTGGTAGTCAGGAAGGCTCTGAACATCCTTCCACGCCAACACGAGAA
CCACGGATACTGCTCAACCAATCCAACCCTGCATTAGACAACATCTCAGTAGTTTCATTG
ACGGTTATGGATCAGCCTGTCACCAATCGAAGATCGAAGCCAGAAACAAAATTTGAATCG
GCCGCACTGAAGTTACATGATTTTCAGGTTTCGGTTACTGTGATCGAGGCACGGCAGTTA
AGTGGTACGAACATGGACCCAGTGGTGATGGTGCAGTTGGGAGACGACAAGAAATATACC
ACCCAGAAGGAGTCTACAAACTGTCCATACTACAATGAAGTATTCGTGTTTGACTACCAC
CTCCCCCGGCAGGTGGTTTTCGACAAGATTGTAACGTTCTCGGTTATACATTCAAGAAAC
CTTCTTAGAAGCGGTACGTTGGTCGGAAAGTTTAAAATGGATCTGGGAACTGTATACGCC
AATCCTGACCACAACTTTAGCAGAAAGTGGGCTGTACTAACTGACCCAGATGACCTTAAT
ACCGGTCCAAAAGGCTATCTAAAGGTTGACATATCTGTGGTTGGGAAGGGAGACAGCATC
AAAATACCGAAGATCAACGAAGAAGAAGAAGATGACATTGAAAACAATCTTTTGTTGCCA
GAGGGGGTGCAGGCTGAAAGGCAAAGAGCGAGGTTTATATTCAAAATCTACCAGGCGGAT
GGCCTTCCTAAAATGAACACCAGCATCACTGAAAAGCTGAAGACTGTACTGCAAGGAGAA
GCAAAGGATCTAGTCGATCCATATGTTGAAATTACATTCTGTGATCAAAAGGGTCGTACT
TCGGTCCGCAAGAACTCCTATGAGCCGTGCTGGAACGAACAGATCATTTTCACCGAATTA
TTTCCACCACTTTGCAAAAGAATCAAAGTCCAAATACGTGATAAAGACAACATTAATAAC
ACAGTTATCGGAACCACATACATCAGTCTTGATAAGATATCAAATTCTGGTGACAGAGGT
TTCTTACCGACATTTGGACCTACCTATGTCAACATGTACGGCTCCCCACGCAATTACACG
ATGGTCAATGAACATTCAGATTTAAACGAAGGCCTTGGAGAAGGGGTTGCATTCAGATGC
CGTTTGCTGTTGGCACTCTCTGTGGAACTGGTGAACATCAATGCTTCAGATGGACAAGGC
TCATCAGATGTGGAAGTGGAATACATACCTGCACTATCCGAGCTCGGGGCGGGAAAGATG
GACGAATTCTTTCTCTTTGGTAGTTTTCTCGAAGCAAATATGATCGACAGGACAATGGCT
GACAAACCTGTGACCTTCGAGGTTACTATAGGAAACTTCGGAAATGACATCGACGGAGCC
AATTTGAGCCGGAAGAAAAGGATGAGTGATGGGAGTGAGGACTCATTGGAAGACACAGAT
GATGAGAGTCAGTCATTGCTCAAAGGTAGCGTCACTGATGACCCCACCATACGACCCCTC
ACCCCTCCAACCCGACCCCTTACCAGTGACAAATACTATTACCACATGCCGTTCTTCGAG
AATAAGCCTTGTGTGTACCTGACCAGTTACTGGCACGACCACAAACGCCGACTCTACAAC
TCAAACATTATGCACAGAGTGGCTGATAAACTTGATGAAGGCTTGCAGGATGTGCAAGAA
ATGCTAAAAACCAGCCACGAACGGCCGGATCGCAGGTTAAGGGGCGTGGCTGAGGAACTG
ACCAATGGCTGTGCTTCGTATATACGGCTAGTCAAGGGTACAGGTGGAATGGGAGCCGGC
CGAACAAGACTTGATCGAGAGAGAAATAAACTCTGCTTACGTGATGTGGAATATATTGGT
AAAGAAGCAAAAAAAGTCAAGGCCATGGTGAAGCCAAGTGTGCTCAAAGAGAACTTAAGC
AAAATGAAATCGCTCCACTCCAAACTTAAAGGCCTCTGTGATGATCCACAACACTCAATT
CCCGACGTGTTCATTTGGATGCTAAGTGGGCCGAAACGTGTAGCTTATGCGCGTATAGCT
GCTCGGCAGATATTGCATTCGGTGCGTGAAGAAGAATGCGGGGAGCATTGCGGGAAGATA
CAGACCTTGTTTTTGCGGTTGCCAGGTAAAAAGAGCCTGGGTCTTTCTGGGTGGAGCATT
CAAGCCAAAGTAGACATTTACTTCTGGTTCGGGTTGGCAAAAAACAAGCGCGATTTCCTG
AAAGGTCTCCCTCAAGGTTACAAGGCAATAAGAGCTGGAAACTCGCTGAAAGCTCCGCCT
AAGACTCTAAACTATCCAGATCGTCTGCAATTTGAACTGCGGGCACATATGTACCAAGCG
AGAGGCTTGCTGGCAGCTGACGACACTGGACTATCGGATCCATTCGCAAAGGTCATATTT
TCCACCCACACTGACACAACACAGGTGATTGAAGAGACCTTGAGTCCTACATGGGACCAG
ACGCTCATAATGCCCAACATAACGTTGTTCGGTCGCGCCGAGGAGCTACGAGACGACCCA
CCGATCATTATAATTGAAGTTTTCGACCAGGACACCGTGGGAAAGAATGAGTACATCGGC
CGAACCATTGCAAAACCGGTTGTCAAAATGAGCCATGAAAGATACGAAGAGCCGAGGTTT
CCATCGCAGCTGGACTGGTACCAAATGTACAGAGGCATGACTAAAGCCGGGGAAATACTG
GCCGCGTTTGAACTTTTACAGATCAAAGGAAAAGACCAAATAGAATCGACCAAAGTAACC
GAAGCCATACAAACAAGTCAAGGCCACAAATTCACGGTCCCGAAAGGAATTCGACCCCTC
CTAGCAAAACACCGAATCGAAGTTTTATTCTGGGGTTTGCGTGACCTTAAACGAGTTCAG
TTGATATCAGTGGACCGACCTCGAGTGGACATTGAAATAGCAGGTCGCTGCGTCTCCTCT
TGCCTTATAAACAACTACAAGAAAAACCCTAACTTCGCTGAGCCTGTCAAGTTCATTGAG
GACGTGGACCTACCCGAAGTGGAGTATTGGTGCCCTCCTATTAGCATAACGTGCATCGAT
TGCCGTGCTTTCGGGCGTTCCGTTCTCGTGGGCACCCATATTATCAGTAACATTTCGAAA
TTTGTCTTCCGTCCGCCAGACAAGTCGAAGATCTACACAGCCAATGTTATAAACGTACTA
ACGGGGAATTTAATTCCGGGAGTTCCCCGAATAAAGAAAAATGGTGAGGTGTCAACTGAG
ACCAATGATGTGGTTGTAAACATCAACGATACCCCAACACTCCCCCCCAGTGGTATGGTG
GAAATTAAACTGGAGGTAGATGAGGAAAAGAAAACCAAAGAAGATGAAGAAGACCCGTTG
GATGAAGCGACGTTGGACTGGTGGTCCAAATATTTCGCCTCACTGGAGACACTTAACGAG
GAAAAATCAAAAATGGACGAGGCAAACATTCAAGATGTTTACAATGATGATGAAGACCAG
GAATCAATTTTGAGCATTTTCCTACCCCCTGAGGATCAACACAAGTATACTGCCTCATCC
CAAATAAAAAAAATCAAGCAAGCAAAGAAAAGCTTGGGTGCTCCAGTGCGAAAGTGGAAG
CACAAGAAATTGCCGATTGATGAGCTAAAGATCTACGACACTGAGCTTGAAAATTCAAAC
GAGTTTTCCGGGTTCAATGACCTTTTGAACTCGTTTGACCTCTATAGAGGTAAACGAGAA
GATTTAGCAGATGACATCACTGACCAGAAAAGGATTGTCGGTAATTTCAAAGGGGCGTTC
AAGATATATCGTCACCCATTACCACACTACGTCGAACAACCTGACCCCCAGTATGGAATG
TTCAAGGGTTTGCCTTCAAATGAACCCATACATGTACTTGTGCGGGTTTATATCATACGA
GCTACTGACTTGCACCCCACCGACCCCAATGGCAAATCCGACCCTTACATTGTCATCTCT
CTGGGCGAGAACAAAGTCAACGACAAGGAAAACTATATTTCCAAACAACTGAATCCAACT
TTTGGAAAGGCTTTTGATTTCGAGGCTACTTTTCCGATGGAGAGCATACTGAATGTGCAA
ATTTATGACTGGGATCTGCTCAGTGCAGACGATCTTATCGGGGAAACGAAAATTGATCTT
GAGAATCGTTTTTACAGCAAACATCGCTCGCTATGTGGAGTGGCCGAAAAATATGCCATA
TTCGGCTACAATCAGTGGCGCGACCCAATGAAACCGTCGGAAATATTAAAGAAACTCTGC
AAAGAGCTCAAACTGGATGGGCCACACTTTATGCCGGGGAAAGTTCGGGTCGGAAACAAA
ACATTTCAAGGAGCAATTGAGTTGGAAGATGAGAACGGCCACAAGAAACCCACTGAAGAG
CATGTGGCACTGGTGGCACTAAGAAATTGGGAGGAAATACCAAAAGTCGGATGCAAATTG
GTGCCTGAACACGTAGAAACCAGATCATTGTATAACTCTGAGAAGCCTGGAATTGAACAG
GGTCGAGTCGAGTTGTGGGTTGATATGTTTCCCATGGACATGCCCCTTCCAGGACCCCCT
GTTGATGTTTCACCCCGCAAACCTAAAGGTTTTCAGTTGCGTGTTATTATTTGGAACACG
GACGAAGTCCTGCTTCAAGATGACGATTTTTTCACTGGAGAAAAAGCTTCTGATATTTAC
TTAAAAGGGTGGCTTTTGGGTGATGACAAGCAAGAAACCGACATCCATTATCGCTCTCTA
ACCGGAGAAGGTAATTTCAACTGGAGATTCATCTACCCGTTCGATTATTTAGTTGCAGAG
GAGAAGTGCGTTGTCACCAAGAAGGAGTCAATGTTCTCTTGGGATGAAACTGAGTTCAAG
ATACCTCCCAGGCTCAATCTGCAAGTGTGGGACGCCGACCACTTTTCCGCCGACGATTTT
CTGGGATCGTTAACGCTGGACTTGACGCGATTGCCGCGCGGCGCCAAGTCGGCCAATAAA
TGCAGTTTAAACATGGCGGCCGAGGACGATGATTCTTCCAATGTTCCAATGATATCGATA
TTTAAACAAAGGAGAATTAAAGGGCTGGGGTGGCCGTTCACTGCCAAAAACGACCAAGAC
GAACTGGGAAATCACAGTACGTTTGGTGGTAAAGTGGAAGCGGAAATCAGTTTGTTGACA
GCGGAAGAAGCGGAAAAGAACCCAGCTGGTTACGGAAGAGATGAACCCGACCCGCTCGAG
AAACCAAATCGCCCAGACACTTCGTTCGTTTGGTTCATGAATCCGCTGAAGTCGTTGCGT
TACCTGATCTGCGCCCGATTCAAATGGCTCATCATCAAAGTCTTCATTGCACTGCTGTTG
ATTGCACTTCTTGTCCTGTTCATTTATTCCTCCCCGAGTTGGATCATGAAGAAAATTGTC
GGGGCGTGA
| Gene3D |
C2_domain_sf (IPR035892) - T[1-124] 8.1E-30 - T[247-374] 1.4E-17 - T[399-526] 7.6E-19 - T[950-1111] 9.3E-20 - T[1473-1584] 7.0E-23 - T[1700-1847] 4.6E-17 |
| SMART |
C2_dom (IPR000008) - T[2-97] 2.0E-4 - T[249-347] 6.4E-11 - T[411-522] 6.7E-13 - T[952-1060] 8.1E-7 - T[1473-1572] 3.3E-12 - T[1712-1840] 2.2 |
| CDD |
C2A_Ferlin (IPR037726) - T[3-129] 3.28808E-53 |
| Pfam |
C2_dom (IPR000008) - T[20-93] 5.0E-6 - T[249-339] 1.5E-10 - T[413-516] 2.6E-17 - T[953-1044] 9.7E-11 - T[1474-1563] 2.7E-18 - T[1796-1837] 0.0025 |
| PANTHER |
Ferlin (IPR037721) - T[46-1981] 0.0 |
| PANTHER |
Otoferlin (IPR029996) - T[46-1981] 0.0 |
| CDD |
C2B_Ferlin (IPR037720) - T[247-356] 1.93411E-58 |
| ProSiteProfiles |
C2_dom (IPR000008) - T[249-332] 9.938 - T[411-507] 12.262 - T[938-1043] 13.283 - T[1474-1557] 14.556 |
| SMART |
FerIin_dom (IPR012968) - T[333-403] 2.3E-40 |
| Pfam |
FerIin_dom (IPR012968) - T[354-403] 3.3E-19 |
| CDD |
C2C_Ferlin (IPR037722) - T[411-559] 9.06626E-86 |
| SMART |
Ferlin_B-domain (IPR012561) - T[836-912] 5.8E-48 |
| Pfam |
Ferlin_B-domain (IPR012561) - T[836-911] 4.8E-32 |
| CDD |
C2D_Ferlin (IPR037723) - T[951-1089] 3.36198E-69 |
| CDD |
C2E_Ferlin (IPR037724) - T[1473-1595] 1.75455E-68 |
| PRINTS |
C2_dom (IPR000008) - T[1489-1501] 1.8E-5 - T[1515-1528] 1.8E-5 - T[1537-1545] 1.8E-5 |
| CDD |
C2F_Ferlin (IPR037725) - T[1712-1843] 8.48903E-75 |
| Pfam |
Ferlin_C (IPR032362) - T[1880-1979] 2.4E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OTOF_HUMAN | 54.017 % | 2199 | 0 |
| FR1L6_HUMAN | 44.881 % | 1548 | 0 |
| FR1L4_HUMAN | 37.977 % | 1176 | 0 |