- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Cisavi.CG.ENS81.R1.1...' >
- Transcript 'Cisavi.CG.ENS81.R41....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R41.1161512-1222474.11120.t
Possible name(s)
FER1L6; MYOF; OTOF
Gene model
Location
R41 [1,161,511 / 1,212,631]
Amino acid sequence
Length: 1,715
>Cisavi.CG.ENS81.R41.1161512-1222474.11120.p
FQVSVTVIEARQLSGTNMDPVVMVQLGDDKKYTTQKESTNCPYYNEVFVFDYHLPRQVVF
DKIVTFSVIHSRNLLRSGTLVGKFKMDLGTVYANPDHNFSRKWAVLTDPDDLNTGPKGYL
KVDISVVGKGDSIKIPKINEEEEDDIENNLLLPEGVQAERQRARFIFKIYQADGLPKMNT
SITEKLKTVLQGEAKDLVDPYVEITFCDQKGRTSVRKNSYEPCWNEQIIFTELFPPLCKR
IKVQIRDKDNINNTVIGTTYISLDKISNSGDRGFLPTFGPTYVNMYGSPRNYTMVNEHSD
LNEGLGEGVAFRCRLLLALSVELVNINASDGQGSSDVEVEYIPALSELGAGKMDEFFLFG
SFLEANMIDRTMADKPVTFEVTIGNFGNDIDGANLSRKKRMSDGSEDSLEDTDDESQSLL
KGSVTDDPTIRPLTPPTRPLTSDKYYYHMPFFENKPCVYLTSYWHDHKRRLYNSNIMHRV
ADKLDEGLQDVQEMLKTSHERPDRRLRGVAEELTNGCASYIRLVKGTGGMGAGRTRLDRE
RNKLCLRDVEYIGKEAKKVKAMVKPSVLKENLSKMKSLHSKLKGLCDDPQHSIPDVFIWM
LSGPKRVAYARIAARQILHSVREEECGEHCGKIQTLFLRLPGKKSLGLSGWSIQAKVDIY
FWFGLAKNKRDFLKGLPQGYKAIRAGNSLKAPPKTLNYPDRLQFELRAHMYQARGLLAAD
DTGLSDPFAKVIFSTHTDTTQVIEETLSPTWDQTLIMPNITLFGRAEELRDDPPIIIIEV
FDQDTVGKNEYIGRTIAKPVVKMSHERYEEPRFPSQLDWYQMYRGMTKAGEILAAFELLQ
PEKQATDIDVIRTGASLACGHAGVTEAIQTSQGHKFTVPKGIRPLLAKHRIEVLFWGLRD
LKRVQLISVDRPRVDIEIAGRCVSSCLINNYKKNPNFAEPVKFIEDVDLPEVEYWCPPIS
ITCIDCRAFGRSVLVGTHIISNISKFVFRPPDKSKIYTDMHQKDSFVILLLLVRRAKKIV
RSGYITIICSAGLKHQGNHKRNGCCMETRGPGPAYDEEKKTKEDEEDPLDEATLDWWSKY
FASLETLNEIRINRKLCVTSLFNRVYTKNEKPTTDVASSNNPFQIYDTELENSNEFSGFN
DLLNSFDLYRGKREDLADDITDQKRIVGNFKGAFKIYRHPLPHYVEQPDPHFSIQGLPSN
EPIHVLVRVYIIRATDLHPTDPNGKSDPYIVISLGENKVNDKENYISKQLNPTFGKAFDF
EATFPMESILNVQIYDWDLLSADDLIGETKIDLENRFYSKHRSLCGVAEKYAIFGYNQWR
DPMKPSEILKKLCKELKLDGPHFMPGKVRVGNKTFQGAIELEDENGHKKPTEEHVALVAL
RNWEEIPKVGCKLVPEHVETRSLYNSEKPGIEQGRVELWVDMFPMDMPLPGPPVDVSPRK
PKGFELRVIIWNTEDVICEDDDFFTGEKMSDIYVKGWLLGDDKQETDIHYRSLTGEGNFN
WRFIYPFDYLVAEEKCVVTKKESMFSWDETEFKIPPRLNLQVWDADHFSADDFLGSLTLD
LTRLPRGAKSANKCSLNMAAEDDDSSNVPMISIFKQRRIKGLGWPFTAKNDQDELGNHST
FGGKVEAEISLLTAEEAEKNPAGYGRDEPDPLEKPNRPDTSFVWFMNPLKSLRYLICARF
KWLIIKVFIALLLIALLVLFIYSSPSWIMKKIVGA
Nucleotide sequence
Length: 5,148
>Cisavi.CG.ENS81.R41.1161512-1222474.11120.t
TTCCAGGTTTCGGTTACTGTGATCGAGGCACGGCAGTTAAGTGGTACGAACATGGACCCA
GTGGTGATGGTGCAGTTGGGAGACGACAAGAAATATACCACCCAGAAGGAGTCTACAAAC
TGTCCATACTACAATGAAGTATTCGTGTTTGACTACCACCTCCCCCGGCAGGTGGTTTTC
GACAAGATTGTAACGTTCTCGGTTATACATTCAAGAAACCTTCTTAGAAGCGGTACGTTG
GTCGGAAAGTTTAAAATGGATCTGGGAACTGTATACGCCAATCCTGACCACAACTTTAGC
AGAAAGTGGGCTGTACTAACTGACCCAGATGACCTTAATACCGGTCCAAAAGGCTATCTA
AAGGTTGACATATCTGTGGTTGGGAAGGGAGACAGCATCAAAATACCGAAGATCAACGAA
GAAGAAGAAGATGACATTGAAAACAATCTTTTGTTGCCAGAGGGGGTGCAGGCTGAAAGG
CAAAGAGCGAGGTTTATATTCAAAATCTACCAGGCGGATGGCCTTCCTAAAATGAACACC
AGCATCACTGAAAAGCTGAAGACTGTACTGCAAGGAGAAGCAAAGGATCTAGTCGATCCA
TATGTTGAAATTACATTCTGTGATCAAAAGGGTCGTACTTCGGTCCGCAAGAACTCCTAT
GAGCCGTGCTGGAACGAACAGATCATTTTCACCGAATTATTTCCACCACTTTGCAAAAGA
ATCAAAGTCCAAATACGTGATAAAGACAACATTAATAACACAGTTATCGGAACCACATAC
ATCAGTCTTGATAAGATATCAAATTCTGGTGACAGAGGTTTCTTACCGACATTTGGACCT
ACCTATGTCAACATGTACGGCTCCCCACGCAATTACACGATGGTCAATGAACATTCAGAT
TTAAACGAAGGCCTTGGAGAAGGGGTTGCATTCAGATGCCGTTTGCTGTTGGCACTCTCT
GTGGAACTGGTGAACATCAATGCTTCAGATGGACAAGGCTCATCAGATGTGGAAGTGGAA
TACATACCTGCACTATCCGAGCTCGGGGCGGGAAAGATGGACGAATTCTTTCTCTTTGGT
AGTTTTCTCGAAGCAAATATGATCGACAGGACAATGGCTGACAAACCTGTGACCTTCGAG
GTTACTATAGGAAACTTCGGAAATGACATCGACGGAGCCAATTTGAGCCGGAAGAAAAGG
ATGAGTGATGGGAGTGAGGACTCATTGGAAGACACAGATGATGAGAGTCAGTCATTGCTC
AAAGGTAGCGTCACTGATGACCCCACCATACGACCCCTCACCCCTCCAACCCGACCCCTT
ACCAGTGACAAATACTATTACCACATGCCGTTCTTCGAGAATAAGCCTTGTGTGTACCTG
ACCAGTTACTGGCACGACCACAAACGCCGACTCTACAACTCAAACATTATGCACAGAGTG
GCTGATAAACTTGATGAAGGCTTGCAGGATGTGCAAGAAATGCTAAAAACCAGCCACGAA
CGGCCGGATCGCAGGTTAAGGGGCGTGGCTGAGGAACTGACCAATGGCTGTGCTTCGTAT
ATACGGCTAGTCAAGGGTACAGGTGGAATGGGAGCCGGCCGAACAAGACTTGATCGAGAG
AGAAATAAACTCTGCTTACGTGATGTGGAATATATTGGTAAAGAAGCAAAAAAAGTCAAG
GCCATGGTGAAGCCAAGTGTGCTCAAAGAGAACTTAAGCAAAATGAAATCGCTCCACTCC
AAACTTAAAGGCCTCTGTGATGATCCACAACACTCAATTCCCGACGTGTTCATTTGGATG
CTAAGTGGGCCGAAACGTGTAGCTTATGCGCGTATAGCTGCTCGGCAGATATTGCATTCG
GTGCGTGAAGAAGAATGCGGGGAGCATTGCGGGAAGATACAGACCTTGTTTTTGCGGTTG
CCAGGTAAAAAGAGCCTGGGTCTTTCTGGGTGGAGCATTCAAGCCAAAGTAGACATTTAC
TTCTGGTTCGGGTTGGCAAAAAACAAGCGCGATTTCCTGAAAGGTCTCCCTCAAGGTTAC
AAGGCAATAAGAGCTGGAAACTCGCTGAAAGCTCCGCCTAAGACTCTAAACTATCCAGAT
CGTCTGCAATTTGAACTGCGGGCACATATGTACCAAGCGAGAGGCTTGCTGGCAGCTGAC
GACACTGGACTATCGGATCCATTCGCAAAGGTCATATTTTCCACCCACACTGACACAACA
CAGGTGATTGAAGAGACCTTGAGTCCTACATGGGACCAGACGCTCATAATGCCCAACATA
ACGTTGTTCGGTCGCGCCGAGGAGCTACGAGACGACCCACCGATCATTATAATTGAAGTT
TTCGACCAGGACACCGTGGGAAAGAATGAGTACATCGGCCGAACCATTGCAAAACCGGTT
GTCAAAATGAGCCATGAAAGATACGAAGAGCCGAGGTTTCCATCGCAGCTGGACTGGTAC
CAAATGTACAGAGGCATGACTAAAGCCGGGGAAATACTGGCCGCGTTTGAACTTTTACAG
CCTGAAAAACAAGCGACTGATATTGACGTCATCCGTACCGGGGCATCGCTCGCCTGCGGG
CACGCGGGTGTAACCGAAGCCATACAAACAAGTCAAGGCCACAAATTCACGGTCCCGAAA
GGAATTCGACCCCTCCTAGCAAAACACCGAATCGAAGTTTTATTCTGGGGTTTGCGTGAC
CTTAAACGAGTTCAGTTGATATCAGTGGACCGACCTCGAGTGGACATTGAAATAGCAGGT
CGCTGCGTCTCCTCTTGCCTTATAAACAACTACAAGAAAAACCCTAACTTCGCTGAGCCT
GTCAAGTTCATTGAGGACGTGGACCTACCCGAAGTGGAGTATTGGTGCCCTCCTATTAGC
ATAACGTGCATCGATTGCCGTGCTTTCGGGCGTTCCGTTCTCGTGGGCACCCATATTATC
AGTAACATTTCGAAATTTGTCTTCCGTCCGCCAGACAAGTCGAAGATCTACACAGATATG
CACCAAAAGGACTCTTTTGTTATATTACTATTACTTGTCCGCCGGGCTAAAAAAATTGTC
CGGTCGGGTTATATTACTATTATTTGTTCGGCCGGCTTAAAGCATCAGGGCAACCATAAG
CGGAATGGTTGTTGTATGGAAACCAGGGGGCCGGGTCCCGCTTACGATGAGGAAAAGAAA
ACCAAAGAAGATGAAGAAGACCCGTTGGATGAAGCGACGTTGGACTGGTGGTCCAAATAT
TTCGCCTCACTGGAGACACTTAACGAGATTCGTATAAACAGAAAACTGTGTGTAACATCT
CTGTTTAATCGTGTCTACACAAAAAATGAAAAGCCAACTACTGATGTGGCTTCATCAAAC
AATCCATTTCAGATCTACGACACTGAGCTTGAAAATTCAAACGAGTTTTCCGGGTTCAAT
GACCTTTTGAACTCGTTTGACCTCTATAGAGGTAAACGAGAAGATTTAGCAGATGACATC
ACTGACCAGAAAAGGATTGTCGGTAATTTCAAAGGGGCGTTCAAGATATATCGTCACCCA
TTACCACACTACGTCGAACAACCTGACCCCCACTTTTCAATCCAGGGTTTGCCTTCAAAT
GAACCCATACATGTACTTGTGCGGGTTTATATCATACGAGCTACTGACTTGCACCCCACC
GACCCCAATGGCAAATCCGACCCTTACATTGTCATCTCTCTGGGCGAGAACAAAGTCAAC
GACAAGGAAAACTATATTTCCAAACAACTGAATCCAACTTTTGGAAAGGCTTTTGATTTC
GAGGCTACTTTTCCGATGGAGAGCATACTGAATGTGCAAATTTATGACTGGGATCTGCTC
AGTGCAGACGATCTTATCGGGGAAACGAAAATTGATCTTGAGAATCGTTTTTACAGCAAA
CATCGCTCGCTATGTGGAGTGGCCGAAAAATATGCCATATTCGGCTACAATCAGTGGCGC
GACCCAATGAAACCGTCGGAAATATTAAAGAAACTCTGCAAAGAGCTCAAACTGGATGGG
CCACACTTTATGCCGGGGAAAGTTCGGGTCGGAAACAAAACATTTCAAGGAGCAATTGAG
TTGGAAGATGAGAACGGCCACAAGAAACCCACTGAAGAGCATGTGGCACTGGTGGCACTA
AGAAATTGGGAGGAAATACCAAAAGTCGGATGCAAATTGGTGCCTGAACACGTAGAAACC
AGATCATTGTATAACTCTGAGAAGCCTGGAATTGAACAGGGTCGAGTCGAGTTGTGGGTT
GATATGTTTCCCATGGACATGCCCCTTCCAGGACCCCCTGTTGATGTTTCACCCCGCAAA
CCTAAAGGGTTTGAATTGCGTGTTATAATTTGGAATACCGAAGACGTTATTTGTGAGGAT
GACGACTTTTTTACTGGCGAGAAAATGTCGGATATCTATGTTAAAGGGTGGCTTTTGGGT
GATGACAAGCAAGAAACCGACATCCATTATCGCTCTCTAACCGGAGAAGGTAATTTCAAC
TGGAGATTCATCTACCCGTTCGATTATTTAGTTGCAGAGGAGAAGTGCGTTGTCACCAAG
AAGGAGTCAATGTTCTCTTGGGATGAAACTGAGTTCAAGATACCTCCCAGGCTCAATCTG
CAAGTGTGGGACGCCGACCACTTTTCCGCCGACGATTTTCTGGGATCGTTAACGCTGGAC
TTGACGCGATTGCCGCGCGGCGCCAAGTCGGCCAATAAATGCAGTTTAAACATGGCGGCC
GAGGACGATGATTCTTCCAATGTTCCAATGATATCGATATTTAAACAAAGGAGAATTAAA
GGGCTGGGGTGGCCGTTCACTGCCAAAAACGACCAAGACGAACTGGGAAATCACAGTACG
TTTGGTGGTAAAGTGGAAGCGGAAATCAGTTTGTTGACAGCGGAAGAAGCGGAAAAGAAC
CCAGCTGGTTACGGAAGAGATGAACCCGACCCGCTCGAGAAACCAAATCGCCCAGACACT
TCGTTCGTTTGGTTCATGAATCCGCTGAAGTCGTTGCGTTACCTGATCTGCGCCCGATTC
AAATGGCTCATCATCAAAGTCTTCATTGCACTGCTGTTGATTGCACTTCTTGTCCTGTTC
ATTTATTCCTCCCCGAGTTGGATCATGAAGAAAATTGTCGGGGCGTGA
| Gene3D |
C2_domain_sf (IPR035892) - T[1-127] 1.3E-17 - T[152-279] 6.4E-19 - T[703-851] 9.8E-20 - T[1191-1311] 6.1E-23 - T[1433-1580] 7.8E-19 |
| ProSiteProfiles |
C2_dom (IPR000008) - T[1-85] 10.664 - T[164-260] 12.262 - T[691-796] 13.283 - T[1207-1290] 14.556 |
| CDD |
C2B_Ferlin (IPR037720) - T[1-109] 1.24049E-57 |
| PANTHER |
Ferlin (IPR037721) - T[1-1090] 0.0 - T[1123-1714] 0.0 |
| PANTHER |
Otoferlin (IPR029996) - T[1-1090] 0.0 - T[1123-1714] 0.0 |
| Pfam |
C2_dom (IPR000008) - T[2-92] 1.2E-10 - T[166-269] 2.2E-17 - T[706-797] 8.1E-11 - T[1207-1296] 2.2E-18 - T[1526-1570] 0.0012 |
| SMART |
C2_dom (IPR000008) - T[2-100] 6.4E-11 - T[164-275] 6.7E-13 - T[705-813] 8.1E-7 - T[1206-1305] 3.3E-12 - T[1445-1573] 0.69 |
| SMART |
FerIin_dom (IPR012968) - T[86-156] 2.3E-40 |
| Pfam |
FerIin_dom (IPR012968) - T[107-156] 2.8E-19 |
| CDD |
C2C_Ferlin (IPR037722) - T[164-312] 1.11983E-85 |
| Pfam |
Ferlin_B-domain (IPR012561) - T[589-664] 4.0E-32 |
| SMART |
Ferlin_B-domain (IPR012561) - T[589-665] 5.8E-48 |
| CDD |
C2D_Ferlin (IPR037723) - T[704-840] 6.85367E-69 |
| CDD |
C2E_Ferlin (IPR037724) - T[1206-1328] 1.64935E-68 |
| PRINTS |
C2_dom (IPR000008) - T[1222-1234] 1.2E-5 - T[1248-1261] 1.2E-5 - T[1270-1278] 1.2E-5 |
| CDD |
C2F_Ferlin (IPR037725) - T[1445-1576] 1.08837E-77 |
| Pfam |
Ferlin_C (IPR032362) - T[1613-1712] 2.0E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OTOF_HUMAN | 55.084 % | 1978 | 0 |
| FR1L6_HUMAN | 43.792 % | 888 | 0 |
| FR1L4_HUMAN | 37.998 % | 1151 | 0 |