- Transcript 'Cisavi.CG.ENS81.R132...' >
- Transcript 'KH2012:KH.C12.396.v1...' >
- Transcript 'Cisavi.CG.ENS81.R41....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R41.1161512-1222474.11121.t
Possible name(s)
FER1L6; MYOF; OTOF
Gene model
Location
R41 [1,161,511 / 1,200,423]
Amino acid sequence
Length: 1,228
>Cisavi.CG.ENS81.R41.1161512-1222474.11121.p
MLKTSHERPDRRLRGVAEELTNGCASYIRLVKGTGGMGAGRTRLDRERNKLCLRDVEYIG
KEAKKVKAMVKPSVLKENLSKMKSLHSKLKGLCDDPQHSIPDVFIWMLSGPKRVAYARIA
ARQILHSVREEECGEHCGKIQTLFLRLPGKKSLGLSGWSIQAKVDIYFWFGLAKNKRDFL
KGLPQGYKAIRAGNSLKAPPKTLNYPDRLQFELRAHMYQARGLLAADDTGLSDPFAKVIF
STHTDTTQVIEETLSPTWDQTLIMPNITLFGRAEELRDDPPIIIIEVFDQDTVGKNEYIG
RTIAKPVVKMSHERYEEPRFPSQLDWYQMYRGMTKAGEILAAFELLQIKGKDQIESTKVT
EAIQTSQGHKFTVPKGIRPLLAKHRIEVLFWGLRDLKRVQLISVDRPRVDIEIAGRCVSS
CLINNYKKNPNFAEPVKFIEDVDLPEVEYWCPPISITCIDCRAFGRSVLVGTHIISNISK
FVFRPPDKSKIYTGKTLDRLSNASEFYITFKQLKKLVNKNKLCFFRVSLDLNLDDEEKKT
KEDEEDPLDEATLDWWSKYFASLETLNEEKSKMDEANIQDVYNDDEDQESIVPSTETNDH
KAKLAEQVGVVKQAKKSLGAPVRKWKHKKLPIDELKIYDTELENSNEFSGFNDLLNSFDL
YRGKREDLADDITDQKRIVGNFKGAFKIYRHPLPHYVEQPDPQYGMFKGLPSNEPIHVLV
RVYIIRATDLHPTDPNGKSDPYIVISLGENKVNDKENYISKQLNPTFGKAFDFEATFPME
SILNVQIYDWDLLSADDLIGETKIDLENRFYSKHRSLCGVAEKYAIFGYNQWRDPMKPSE
ILKKLCKELKLDGPHFMPGKVRVGNKTFQGAIELEDENGHKKPTEEHVALVALRNWEEIP
KVGCKLVPEHVETRSLYNSEKPGIEQGRVELWVDMFPMDMPLPGPPVDVSPRKPKGFQLR
VIIWNTDEVLLQDDDFFTGEKASDIYLKGWLLGDDKQETDIHYRSLTGEGNFNWRFIYPF
DYLVAEEKCVVTKKESMFSWDETEFKIPPRLNLQVWDADHFSADDFLGSLTLDLTRLPRG
AKSANKCSLNMAAEDDDSSNVPMISIFKQRRIKGLGWPFTAKNDQDELGNHSTFGGKVEA
EISLLTAEEAEKNPAGYGRDEPDPLEKPNRPDTSFVWFMNPLKSLRYLICARFKWLIIKV
FIALLLIALLVLFIYSSPSWIMKKIVGA
Nucleotide sequence
Length: 3,687
>Cisavi.CG.ENS81.R41.1161512-1222474.11121.t
ATGCTAAAAACCAGCCACGAACGGCCGGATCGCAGGTTAAGGGGCGTGGCTGAGGAACTG
ACCAATGGCTGTGCTTCGTATATACGGCTAGTCAAGGGTACAGGTGGAATGGGAGCCGGC
CGAACAAGACTTGATCGAGAGAGAAATAAACTCTGCTTACGTGATGTGGAATATATTGGT
AAAGAAGCAAAAAAAGTCAAGGCCATGGTGAAGCCAAGTGTGCTCAAAGAGAACTTAAGC
AAAATGAAATCGCTCCACTCCAAACTTAAAGGCCTCTGTGATGATCCACAACACTCAATT
CCCGACGTGTTCATTTGGATGCTAAGTGGGCCGAAACGTGTAGCTTATGCGCGTATAGCT
GCTCGGCAGATATTGCATTCGGTGCGTGAAGAAGAATGCGGGGAGCATTGCGGGAAGATA
CAGACCTTGTTTTTGCGGTTGCCAGGTAAAAAGAGCCTGGGTCTTTCTGGGTGGAGCATT
CAAGCCAAAGTAGACATTTACTTCTGGTTCGGGTTGGCAAAAAACAAGCGCGATTTCCTG
AAAGGTCTCCCTCAAGGTTACAAGGCAATAAGAGCTGGAAACTCGCTGAAAGCTCCGCCT
AAGACTCTAAACTATCCAGATCGTCTGCAATTTGAACTGCGGGCACATATGTACCAAGCG
AGAGGCTTGCTGGCAGCTGACGACACTGGACTATCGGATCCATTCGCAAAGGTCATATTT
TCCACCCACACTGACACAACACAGGTGATTGAAGAGACCTTGAGTCCTACATGGGACCAG
ACGCTCATAATGCCCAACATAACGTTGTTCGGTCGCGCCGAGGAGCTACGAGACGACCCA
CCGATCATTATAATTGAAGTTTTCGACCAGGACACCGTGGGAAAGAATGAGTACATCGGC
CGAACCATTGCAAAACCGGTTGTCAAAATGAGCCATGAAAGATACGAAGAGCCGAGGTTT
CCATCGCAGCTGGACTGGTACCAAATGTACAGAGGCATGACTAAAGCCGGGGAAATACTG
GCCGCGTTTGAACTTTTACAGATCAAAGGAAAAGACCAAATAGAATCGACCAAAGTAACC
GAAGCCATACAAACAAGTCAAGGCCACAAATTCACGGTCCCGAAAGGAATTCGACCCCTC
CTAGCAAAACACCGAATCGAAGTTTTATTCTGGGGTTTGCGTGACCTTAAACGAGTTCAG
TTGATATCAGTGGACCGACCTCGAGTGGACATTGAAATAGCAGGTCGCTGCGTCTCCTCT
TGCCTTATAAACAACTACAAGAAAAACCCTAACTTCGCTGAGCCTGTCAAGTTCATTGAG
GACGTGGACCTACCCGAAGTGGAGTATTGGTGCCCTCCTATTAGCATAACGTGCATCGAT
TGCCGTGCTTTCGGGCGTTCCGTTCTCGTGGGCACCCATATTATCAGTAACATTTCGAAA
TTTGTCTTCCGTCCGCCAGACAAGTCGAAGATCTACACAGGTAAGACCTTGGACAGATTA
TCTAATGCTTCAGAATTTTATATTACTTTTAAACAATTAAAAAAGTTAGTGAACAAAAAT
AAACTTTGTTTTTTTCGAGTAAGTTTAGACTTGAATTTGGACGATGAGGAAAAGAAAACC
AAAGAAGATGAAGAAGACCCGTTGGATGAAGCGACGTTGGACTGGTGGTCCAAATATTTC
GCCTCACTGGAGACACTTAACGAGGAAAAATCAAAAATGGACGAGGCAAACATTCAAGAT
GTTTACAATGATGATGAAGACCAGGAATCAATTGTTCCTTCGACAGAAACCAATGATCAC
AAAGCAAAACTCGCAGAGCAAGTTGGTGTAGTCAAGCAAGCAAAGAAAAGCTTGGGTGCT
CCAGTGCGAAAGTGGAAGCACAAGAAATTGCCGATTGATGAGCTAAAGATCTACGACACT
GAGCTTGAAAATTCAAACGAGTTTTCCGGGTTCAATGACCTTTTGAACTCGTTTGACCTC
TATAGAGGTAAACGAGAAGATTTAGCAGATGACATCACTGACCAGAAAAGGATTGTCGGT
AATTTCAAAGGGGCGTTCAAGATATATCGTCACCCATTACCACACTACGTCGAACAACCT
GACCCCCAGTATGGAATGTTCAAGGGTTTGCCTTCAAATGAACCCATACATGTACTTGTG
CGGGTTTATATCATACGAGCTACTGACTTGCACCCCACCGACCCCAATGGCAAATCCGAC
CCTTACATTGTCATCTCTCTGGGCGAGAACAAAGTCAACGACAAGGAAAACTATATTTCC
AAACAACTGAATCCAACTTTTGGAAAGGCTTTTGATTTCGAGGCTACTTTTCCGATGGAG
AGCATACTGAATGTGCAAATTTATGACTGGGATCTGCTCAGTGCAGACGATCTTATCGGG
GAAACGAAAATTGATCTTGAGAATCGTTTTTACAGCAAACATCGCTCGCTATGTGGAGTG
GCCGAAAAATATGCCATATTCGGCTACAATCAGTGGCGCGACCCAATGAAACCGTCGGAA
ATATTAAAGAAACTCTGCAAAGAGCTCAAACTGGATGGGCCACACTTTATGCCGGGGAAA
GTTCGGGTCGGAAACAAAACATTTCAAGGAGCAATTGAGTTGGAAGATGAGAACGGCCAC
AAGAAACCCACTGAAGAGCATGTGGCACTGGTGGCACTAAGAAATTGGGAGGAAATACCA
AAAGTCGGATGCAAATTGGTGCCTGAACACGTAGAAACCAGATCATTGTATAACTCTGAG
AAGCCTGGAATTGAACAGGGTCGAGTCGAGTTGTGGGTTGATATGTTTCCCATGGACATG
CCCCTTCCAGGACCCCCTGTTGATGTTTCACCCCGCAAACCTAAAGGTTTTCAGTTGCGT
GTTATTATTTGGAACACGGACGAAGTCCTGCTTCAAGATGACGATTTTTTCACTGGAGAA
AAAGCTTCTGATATTTACTTAAAAGGGTGGCTTTTGGGTGATGACAAGCAAGAAACCGAC
ATCCATTATCGCTCTCTAACCGGAGAAGGTAATTTCAACTGGAGATTCATCTACCCGTTC
GATTATTTAGTTGCAGAGGAGAAGTGCGTTGTCACCAAGAAGGAGTCAATGTTCTCTTGG
GATGAAACTGAGTTCAAGATACCTCCCAGGCTCAATCTGCAAGTGTGGGACGCCGACCAC
TTTTCCGCCGACGATTTTCTGGGATCGTTAACGCTGGACTTGACGCGATTGCCGCGCGGC
GCCAAGTCGGCCAATAAATGCAGTTTAAACATGGCGGCCGAGGACGATGATTCTTCCAAT
GTTCCAATGATATCGATATTTAAACAAAGGAGAATTAAAGGGCTGGGGTGGCCGTTCACT
GCCAAAAACGACCAAGACGAACTGGGAAATCACAGTACGTTTGGTGGTAAAGTGGAAGCG
GAAATCAGTTTGTTGACAGCGGAAGAAGCGGAAAAGAACCCAGCTGGTTACGGAAGAGAT
GAACCCGACCCGCTCGAGAAACCAAATCGCCCAGACACTTCGTTCGTTTGGTTCATGAAT
CCGCTGAAGTCGTTGCGTTACCTGATCTGCGCCCGATTCAAATGGCTCATCATCAAAGTC
TTCATTGCACTGCTGTTGATTGCACTTCTTGTCCTGTTCATTTATTCCTCCCCGAGTTGG
ATCATGAAGAAAATTGTCGGGGCGTGA
| PANTHER |
Ferlin (IPR037721) - T[1-1227] 0.0 |
| PANTHER |
Otoferlin (IPR029996) - T[1-1227] 0.0 |
| Pfam |
Ferlin_B-domain (IPR012561) - T[96-171] 2.7E-32 |
| SMART |
Ferlin_B-domain (IPR012561) - T[96-172] 5.8E-48 |
| ProSiteProfiles |
C2_dom (IPR000008) - T[198-303] 13.283 - T[720-803] 14.556 |
| Gene3D |
C2_domain_sf (IPR035892) - T[210-371] 5.0E-20 - T[708-824] 4.8E-23 - T[946-1093] 2.5E-17 |
| CDD |
C2D_Ferlin (IPR037723) - T[211-349] 2.8284E-69 |
| SMART |
C2_dom (IPR000008) - T[212-320] 8.1E-7 - T[719-818] 3.3E-12 - T[958-1086] 2.2 |
| Pfam |
C2_dom (IPR000008) - T[213-304] 5.3E-11 - T[720-809] 1.5E-18 - T[1042-1083] 0.0014 |
| CDD |
C2E_Ferlin (IPR037724) - T[719-841] 8.07229E-69 |
| PRINTS |
C2_dom (IPR000008) - T[735-747] 4.5E-6 - T[761-774] 4.5E-6 - T[783-791] 4.5E-6 |
| CDD |
C2F_Ferlin (IPR037725) - T[958-1089] 9.56969E-75 |
| Pfam |
Ferlin_C (IPR032362) - T[1126-1225] 1.3E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OTOF_HUMAN | 55.142 % | 1382 | 0 |
| FR1L6_HUMAN | 51.092 % | 664 | 0 |
| FR1L4_HUMAN | 40 % | 837 | 0 |