Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R41.1328885-1330891.12307.t

Possible name(s)

PAFAH1B2; PAFAH1B3

Gene model

Cisavi.CG.ENS81.R41.1328885-1330891

Location

R41 [1,328,884 / 1,330,891]

Sequences

Amino acid sequence

Length: 215

>Cisavi.CG.ENS81.R41.1328885-1330891.12307.p
VPVQKNSAVIPAAVIDVQGDGRWNSQHRIFCEQARNQDVDILFLGDSMLRMMYNSNAWSK
YLQPYRCLNFAIGGDQTQHVLWRLQNGELDSVKAKCAVVWCGTNNSGNTAVEVCSEGMHA
VITYVREKLDCFVLLLAIAPRGEQPNPYRSKMEKANLLIQQKINNQEKVDYLDVASQFLN
KNGKISGSDLYDFLHPSQVGYEKILSILIKKIEAL

Nucleotide sequence

Length: 674

>Cisavi.CG.ENS81.R41.1328885-1330891.12307.t
CACAATACAAGATAATGGCTGAATTAAATGTACCAGTTCAAAAAAACAGTGCAGTAATAC
CAGCTGCGGTAATTGATGTCCAGGGTGATGGAAGATGGAATTCACAGCACCGAATATTTT
GTGAGCAAGCCAGAAATCAAGATGTTGACATTTTGTTCTTAGGAGACTCCATGTTACGCA
TGATGTACAACAGCAATGCTTGGAGCAAATACCTTCAGCCTTACCGTTGTCTTAACTTCG
CAATTGGCGGCGACCAGACGCAACATGTGTTATGGAGATTACAAAACGGAGAGTTGGACA
GTGTGAAAGCTAAATGTGCTGTGGTGTGGTGTGGAACAAATAACAGTGGGAATACTGCTG
TAGAGGTGTGTTCTGAAGGTATGCATGCAGTGATAACGTATGTGAGAGAAAAACTAGATT
GCTTTGTTTTATTGCTGGCGATTGCTCCAAGAGGAGAACAGCCAAACCCGTACAGAAGCA
AAATGGAAAAAGCAAATTTGCTGATTCAGCAAAAAATAAACAACCAAGAAAAAGTGGATT
ATTTGGATGTGGCAAGCCAGTTTTTGAATAAAAACGGAAAAATTTCTGGTTCAGATTTAT
ATGATTTCTTACACCCCTCTCAAGTTGGTTATGAGAAAATATTATCAATTTTGATCAAAA
AAATTGAGGCACTT

InterProScan

Gene3D	SGNH_hydro_sf (IPR036514) - T[3-215] 5.1E-51
Pfam	SGNH_hydro (IPR013830) - T[43-203] 6.4E-13

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PA1B3_HUMAN	41.089 %	186	1.95E-59
PA1B2_HUMAN	44 %	182	5.27E-58