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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Clone 'ciad078k07' > 
  4. Transcript 'Harore.CG.MTP2014.S1...' > 
  5. Transcript 'Cisavi.CG.ENS81.R41....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R41.1886259-1889972.13751.t

Possible name(s)

RPL23A

Gene model

Cisavi.CG.ENS81.R41.1886259-1889972

Location

R41 [1,886,258 / 1,889,972]

Sequences

Amino acid sequence

Length: 145

>Cisavi.CG.ENS81.R41.1886259-1889972.13751.p
MAAGGAKEKALKAKKAVLKGLHSHRKKKMRKSVHFRRPRTLKLPRAPKYPRKSVAKRNKM
DQFAIVKHPLTTESAMKKIEDNNTLVFIVDLKANKPQIKQAVKKLYDIDVAKVNTLIRPD
GRKKAYVKLAPDYDALDVANKIGII

Nucleotide sequence

Length: 468

>Cisavi.CG.ENS81.R41.1886259-1889972.13751.t
TCTAATCCAAGATGGCGGCAGGTGGAGCCAAAGAGAAAGCGTTGAAAGCCAAGAAGGCGG
TCCTGAAAGGCCTTCACTCGCACCGCAAGAAGAAGATGCGAAAGAGCGTTCACTTCCGAC
GACCACGCACCCTCAAACTTCCCAGGGCACCGAAGTACCCGCGCAAAAGTGTCGCCAAGC
GCAACAAGATGGACCAGTTCGCCATCGTGAAACACCCATTGACCACCGAAAGTGCAATGA
AGAAAATAGAAGACAACAACACTCTCGTGTTCATTGTCGATCTTAAGGCGAACAAGCCGC
AAATCAAGCAAGCGGTGAAGAAACTTTACGACATCGACGTCGCGAAAGTAAACACCCTGA
TTCGACCGGACGGAAGAAAGAAGGCGTACGTGAAACTTGCTCCAGATTACGACGCGCTTG
ATGTTGCGAATAAAATCGGGATCATCTAAATAAAATTTCAAACCACAA

InterProScan

Pfam
Ribosomal_L23/L25_N (IPR005633) - T[6-55] 3.0E-23
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[27-145] 8.5E-63
SUPERFAMILY
Ribosomal_L23/L15e_core_dom_sf (IPR012678) - T[63-138] 2.7E-29
Hamap
Ribosomal_L25/23 (IPR013025) - T[65-145] 23.147
Pfam
Ribosomal_L25/23 (IPR013025) - T[65-130] 3.8E-17
TIGRFAM
Ribosomal_L23 (IPR019985) - T[69-145] 2.8E-31
ProSitePatterns
Ribosomal_L23/L25_CS (IPR001014) - T[123-138] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL23A_HUMAN 82.54 % 210 3.16E-71