Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R41.2754078-2756825.15302.t

Possible name(s)

CCNA1; CCNB1; CCNB2

Gene model

Cisavi.CG.ENS81.R41.2754078-2756825

Location

R41 [2,754,077 / 2,755,873]

Sequences

Amino acid sequence

Length: 187

>Cisavi.CG.ENS81.R41.2754078-2756825.15302.p
MVIGSPCKQTDELASNIFDLKLKPDVEDIDENDTENPQLCSEFVNDIYHYMLYLESVSPI
NRNYLKDTGLKSKMRCILVDWLIQVHHRFQLLQETLYLTIAILDRFLQVHPVPRAKLQLA
GVTYSKEDLLPVVCHLAKNLKSAEKSSYQQAVKSKYSSHKMLKIAQIDEVKQALVGELAE
QADIHKL

Nucleotide sequence

Length: 945

>Cisavi.CG.ENS81.R41.2754078-2756825.15302.t
GACGAGTAAGAGCTTACTTGATGCCAAATCGAAGACACAGCTTCCGAAGACCACCAGTAA
CGCACTGAAATCCTCTACAAATCTACCCACAAAGCCGCGCACAGTCCTACAAAAAAGTGT
GCTGACCAAGAACTATGTAAACGCCATCAAATTAGAATCGCAAAAATCCAACCCCATCAA
ACCAGCAAAGCTTCAACAAACCACCGAGGTTCCCTCCATTAAAGATTCCCCCATGGTGAT
TGGCTCTCCATGCAAACAAACCGATGAACTCGCCAGCAACATTTTCGATCTTAAATTGAA
GCCTGACGTCGAAGACATTGATGAGAATGACACTGAAAACCCACAACTTTGCTCCGAATT
TGTCAACGACATCTACCACTACATGCTGTACTTGGAATCTGTTTCCCCAATAAATCGAAA
CTACTTGAAAGACACCGGTTTGAAGTCAAAAATGAGATGTATTCTTGTCGACTGGTTGAT
CCAAGTTCACCACAGATTTCAACTTCTTCAAGAAACTTTATACTTGACAATCGCGATTCT
GGACAGATTTTTACAGGTACACCCTGTTCCTCGAGCAAAGTTGCAGCTCGCTGGTGTCAC
CTACTCAAAAGAGGACTTGCTACCGGTCGTCTGCCATTTGGCGAAAAACCTTAAATCAGC
TGAGAAAAGTTCATACCAGCAAGCAGTGAAATCCAAATATTCCAGTCACAAAATGTTGAA
GATCGCCCAGATTGACGAAGTTAAACAAGCTTTGGTTGGTGAACTTGCAGAACAAGCTGA
CATCCATAAATTATGAGCGTCAAATAACTCTAGCATCATCGCCGTGAAACTACCAACAAA
ACCTGGTTTCTGCTGATAGTCCAGCTTCCGTCGGATTGTGTACTTAGATTCTATTGTTTA
ACGATCGAAGTGTTTTTAATTGACTTTTTATCATTATTTAGGCCG

InterProScan

SUPERFAMILY	Cyclin-like_sf (IPR036915) - T[35-123] 6.43E-26 - T[121-168] 4.93E-6
Pfam	Cyclin_N (IPR006671) - T[46-123] 2.3E-18
CDD	Cyclin-like (IPR013763) - T[74-123] 2.64498E-11
ProSitePatterns	Cyclin_N (IPR006671) - T[75-106] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CCNB1_HUMAN	48.98 %	108	4.9E-28
CCNB2_HUMAN	58.163 %	130	1.96E-36