Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 713

>Cisavi.CG.ENS81.R442.121230-128620.03602.p
SKIRNIGIMAHIDAGKTTTTERMLFYSGYINKMGDIDSGNTVMDYLPTEIERGITVQSAA
ISFNWDNTQINLIDTPGHVDFTIEVERALRVLDGAVAIFDGSRGVEAQSRMVWLQADGHN
IPRLAYINKMDKTEANFAASVDSLKRQLKANTLILQLPVFQANQFVGVIDLITMERIEWD
MQVVSPNQNGRNCTIHKLTNKDKEWETSLSAKSSIIEQLADKFDEVAIQWLEGEYAGDAE
LFPSTELKKWIRHGTIDRTFVPVLCGSSYKNVGIQPLLNAVVDYLPQPSDIQHPFLRYYD
NTLLAMAFKVLHDKRLGSIIFVRVYSGTLESGRKLYNVNKGKEEKVLRLMTVYADEYKDT
KVIKAGNIGVISGFQSTVTGDTLLESKQALEAAVAKANLISKDTVDNKTDNSPVVLTAVR
IPEPVFFCSVEVYSPTQEKALRHALDVLCKEDPSVRVNFDDYGSIMLSGMGELHMDVVSQ
RIKSEFKIDAYFGPIQVAYRECPTLQVTHKAMYSRTILDNLYEVEIAIQISPCPELSTMR
DAINVQKPAYNPELSYSAALGVIQALQQGNILGYPVMGADVRILTARAKRGCPSGLITAS
AVKCTREALDKASCDLLEPMMQIEISTRGENLMQKILGDLAKRHAKISDISTTDNDGNMK
ILAEAPVSEMKGYASSLRSSTSGNADLSLHPSGYKVVTQERKLQLKRKISGTT

Nucleotide sequence

Length: 2,139

>Cisavi.CG.ENS81.R442.121230-128620.03602.t
TCAAAAATACGAAACATTGGAATAATGGCTCACATAGATGCGGGCAAAACTACTACGACA
GAACGTATGCTGTTTTACTCAGGCTATATAAATAAAATGGGAGATATTGACAGTGGAAAT
ACCGTTATGGACTACCTTCCCACTGAAATAGAGCGGGGGATTACTGTACAAAGTGCAGCA
ATATCATTTAACTGGGATAATACTCAAATAAACCTTATTGACACACCAGGCCATGTGGAT
TTCACTATCGAGGTGGAAAGAGCGCTAAGGGTGTTGGATGGTGCTGTTGCTATATTTGAT
GGCTCTAGAGGGGTGGAGGCTCAGTCACGAATGGTTTGGTTGCAAGCAGACGGGCATAAT
ATTCCTCGCTTAGCATATATAAACAAAATGGACAAAACCGAAGCTAACTTTGCAGCTTCA
GTGGATTCCTTGAAGCGTCAATTAAAAGCAAACACATTGATATTGCAGCTGCCAGTATTT
CAAGCTAACCAGTTTGTTGGTGTTATTGATTTGATCACTATGGAAAGAATAGAATGGGAC
ATGCAAGTGGTCAGCCCCAACCAGAATGGTAGGAATTGCACCATCCATAAACTGACAAAC
AAAGATAAAGAATGGGAGACCTCGCTGTCAGCTAAATCAAGTATTATTGAACAGCTTGCA
GATAAATTTGATGAAGTGGCAATTCAGTGGCTTGAAGGGGAATATGCTGGAGATGCTGAG
TTATTTCCATCAACTGAATTGAAAAAGTGGATCAGACATGGGACGATAGATCGCACATTT
GTCCCAGTCCTTTGTGGCAGTTCATATAAAAATGTTGGTATACAACCATTACTAAATGCA
GTCGTGGATTACCTTCCACAGCCCAGTGATATTCAACATCCTTTTTTACGCTATTATGAT
AACACATTATTGGCAATGGCATTCAAAGTCCTACATGATAAAAGACTTGGATCAATCATA
TTCGTACGAGTTTATTCTGGTACCCTGGAAAGTGGAAGAAAATTGTACAACGTCAACAAG
GGAAAAGAGGAAAAAGTACTAAGGTTGATGACAGTATATGCTGATGAGTACAAAGACACA
AAAGTAATAAAAGCTGGCAACATTGGAGTCATATCAGGGTTTCAAAGCACTGTTACAGGA
GATACTTTATTGGAGTCTAAGCAAGCCTTAGAAGCTGCTGTTGCAAAAGCCAATTTAATC
AGTAAAGATACTGTTGATAATAAAACTGACAATTCACCTGTTGTATTAACTGCTGTTAGA
ATACCTGAACCTGTGTTCTTCTGTTCAGTTGAAGTTTATAGCCCAACACAGGAGAAAGCA
TTAAGGCATGCCCTTGATGTTTTGTGCAAAGAGGACCCATCTGTTCGAGTAAATTTTGAT
GATTATGGGTCCATCATGTTGTCTGGAATGGGTGAACTGCACATGGATGTCGTATCGCAA
AGGATCAAATCTGAATTTAAAATTGATGCTTATTTCGGGCCAATTCAGGTTGCATACAGA
GAATGTCCGACCTTGCAAGTGACACATAAAGCAATGTACAGTCGCACCATCTTGGACAAC
CTATATGAAGTTGAAATTGCTATCCAGATTTCACCCTGTCCTGAACTCAGTACAATGAGA
GATGCCATCAATGTACAAAAGCCAGCATATAATCCTGAACTATCTTACTCTGCTGCTTTG
GGTGTTATCCAGGCTTTGCAGCAAGGAAATATTCTGGGTTATCCTGTAATGGGTGCCGAT
GTTCGTATTCTCACAGCGCGTGCTAAACGAGGTTGCCCATCAGGTTTAATAACAGCATCT
GCTGTCAAATGCACAAGGGAAGCTCTGGATAAAGCAAGCTGTGATCTATTGGAACCAATG
ATGCAAATCGAGATATCCACCAGAGGAGAAAACCTGATGCAAAAAATTCTTGGAGACCTG
GCAAAACGGCATGCTAAAATCAGTGACATAAGCACCACTGATAATGATGGAAACATGAAA
ATTTTGGCAGAAGCTCCAGTGTCAGAAATGAAGGGTTATGCGTCCAGTTTACGAAGTAGC
ACGTCTGGAAATGCTGACTTATCCTTACACCCAAGCGGATACAAGGTTGTAACCCAAGAA
AGAAAACTCCAATTAAAAAGGAAAATAAGTGGCACAACA

InterProScan

ProSiteProfiles	TF_GTP-bd_dom (IPR000795) - T[1-289] 70.838
TIGRFAM	Small_GTP-bd_dom (IPR005225) - T[2-171] 2.1E-26
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[2-286] 1.29E-85
Pfam	TF_GTP-bd_dom (IPR000795) - T[2-286] 9.4E-61
PRINTS	TF_GTP-bd_dom (IPR000795) - T[5-18] 2.1E-15 - T[51-59] 2.1E-15 - T[71-81] 2.1E-15 - T[87-98] 2.1E-15 - T[123-132] 2.1E-15
SUPERFAMILY	Transl_B-barrel_sf (IPR009000) - T[270-388] 2.21E-27
Pfam	EFTu-like_2 (IPR004161) - T[317-383] 1.0E-8
SUPERFAMILY	EFG_III/V (IPR035647) - T[421-497] 1.26E-18 - T[618-701] 3.21E-15
CDD	EFG_III (IPR009022) - T[422-496] 1.80556E-24
SUPERFAMILY	Ribosomal_S5_D2-typ_fold (IPR020568) - T[496-612] 2.5E-7
Gene3D	Ribosomal_S5_D2-typ_fold_subgr (IPR014721) - T[504-618] 2.2E-29 - T[693-700] 2.2E-29
SMART	EFG_V-like (IPR000640) - T[615-705] 4.9E-13
Pfam	EFG_V-like (IPR000640) - T[616-701] 1.2E-19
CDD	EFG_V (IPR035649) - T[618-698] 5.74704E-19