Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 701

>Cisavi.CG.ENS81.R442.121230-128620.03604.p
RNIGIMAHIDAGKTTTTERMLFYSGYINKMGDIDSGNTVMDYLPTEIERGITVQSAAISF
NWDNTQINLIDTPGHVDFTIEVERALRVLDGAVAIFDGSRGVEAQSRMVWLQADGHNIPR
LAYINKMDKTEANFAASVDSLKRQLKANTLILQLPVFQANQFVGVIDLITMERIEWDMQV
VSPNQNGRNCTIHKLTNKDKEWETSLSAKSSIIEQVYKFDEVAIQWLEGEYAGDAELFPS
TELKKWIRHGTIDRTFVPVLCGSSYKNVGIQPLLNAVVDYLPQPSDIQHPFLYLSLKSNK
NLSLFRRYYDNTLLAMAFKVLHDKRLGSIIFVRVYSGTLESGRKLYNVNKGKEEKVLRLM
TVYADEYKDTKVIKAGNIGVISGFQSTVTGDTLLESKQALEAATDVIPEPVFFCSVEVYS
PTQEKALRHALDVLCKEDPSVRVNFDDYGSIMLSGMGELHMDVVSQRIKSEFKIDAYFGP
IQVAYRECPTLQVTHKAMYSRTILDNLYEVEIAIQISPCPELSTMRDAINVQKPAYNPEL
SYSAALGVIQALQQGNILGYPVMGADVRILTARAKRGCPSGLITASAVKCTREALDKASC
DLLEPMMQIEVGCSKTQGENLMQKILGDLAKRHAKISDISTTDNDGNMKILAEAPVSEMK
GYASSLRSSTSGNADLSLHPSGYKVVTQERKLQLKRKISGT

Nucleotide sequence

Length: 2,103

>Cisavi.CG.ENS81.R442.121230-128620.03604.t
CGAAACATTGGAATAATGGCTCACATAGATGCGGGCAAAACTACTACGACAGAACGTATG
CTGTTTTACTCAGGCTATATAAATAAAATGGGAGATATTGACAGTGGAAATACCGTTATG
GACTACCTTCCCACTGAAATAGAGCGGGGGATTACTGTACAAAGTGCAGCAATATCATTT
AACTGGGATAATACTCAAATAAACCTTATTGACACACCAGGCCATGTGGATTTCACTATC
GAGGTGGAAAGAGCGCTAAGGGTGTTGGATGGTGCTGTTGCTATATTTGATGGCTCTAGA
GGGGTGGAGGCTCAGTCACGAATGGTTTGGTTGCAAGCAGACGGGCATAATATTCCTCGC
TTAGCATATATAAACAAAATGGACAAAACCGAAGCTAACTTTGCAGCTTCAGTGGATTCC
TTGAAGCGTCAATTAAAAGCAAACACATTGATATTGCAGCTGCCAGTATTTCAAGCTAAC
CAGTTTGTTGGTGTTATTGATTTGATCACTATGGAAAGAATAGAATGGGACATGCAAGTG
GTCAGCCCCAACCAGAATGGTAGGAATTGCACCATCCATAAACTGACAAACAAAGATAAA
GAATGGGAGACCTCGCTGTCAGCTAAATCAAGTATTATTGAACAGGTGTATAAATTTGAT
GAAGTGGCAATTCAGTGGCTTGAAGGGGAATATGCTGGAGATGCTGAGTTATTTCCATCA
ACTGAATTGAAAAAGTGGATCAGACATGGGACGATAGATCGCACATTTGTCCCAGTCCTT
TGTGGCAGTTCATATAAAAATGTTGGTATACAACCATTACTAAATGCAGTCGTGGATTAC
CTTCCACAGCCCAGTGATATTCAACATCCTTTTTTATATTTAAGTTTAAAAAGTAACAAA
AATCTATCACTTTTTAGACGCTATTATGATAACACATTATTGGCAATGGCATTCAAAGTC
CTACATGATAAAAGACTTGGATCAATCATATTCGTACGAGTTTATTCTGGTACCCTGGAA
AGTGGAAGAAAATTGTACAACGTCAACAAGGGAAAAGAGGAAAAAGTACTAAGGTTGATG
ACAGTATATGCTGATGAGTACAAAGACACAAAAGTAATAAAAGCTGGCAACATTGGAGTC
ATATCAGGGTTTCAAAGCACTGTTACAGGAGATACTTTATTGGAGTCTAAGCAAGCCTTA
GAAGCTGCTACAGACGTAATACCTGAACCTGTGTTCTTCTGTTCAGTTGAAGTTTATAGC
CCAACACAGGAGAAAGCATTAAGGCATGCCCTTGATGTTTTGTGCAAAGAGGACCCATCT
GTTCGAGTAAATTTTGATGATTATGGGTCCATCATGTTGTCTGGAATGGGTGAACTGCAC
ATGGATGTCGTATCGCAAAGGATCAAATCTGAATTTAAAATTGATGCTTATTTCGGGCCA
ATTCAGGTTGCATACAGAGAATGTCCGACCTTGCAAGTGACACATAAAGCAATGTACAGT
CGCACCATCTTGGACAACCTATATGAAGTTGAAATTGCTATCCAGATTTCACCCTGTCCT
GAACTCAGTACAATGAGAGATGCCATCAATGTACAAAAGCCAGCATATAATCCTGAACTA
TCTTACTCTGCTGCTTTGGGTGTTATCCAGGCTTTGCAGCAAGGAAATATTCTGGGTTAT
CCTGTAATGGGTGCCGATGTTCGTATTCTCACAGCGCGTGCTAAACGAGGTTGCCCATCA
GGTTTAATAACAGCATCTGCTGTCAAATGCACAAGGGAAGCTCTGGATAAAGCAAGCTGT
GATCTATTGGAACCAATGATGCAAATCGAGGTAGGGTGTAGCAAAACACAAGGAGAAAAC
CTGATGCAAAAAATTCTTGGAGACCTGGCAAAACGGCATGCTAAAATCAGTGACATAAGC
ACCACTGATAATGATGGAAACATGAAAATTTTGGCAGAAGCTCCAGTGTCAGAAATGAAG
GGTTATGCGTCCAGTTTACGAAGTAGCACGTCTGGAAATGCTGACTTATCCTTACACCCA
AGCGGATACAAGGTTGTAACCCAAGAAAGAAAACTCCAATTAAAAAGGAAAATAAGTGGC
ACA

InterProScan

Pfam	TF_GTP-bd_dom (IPR000795) - T[1-282] 1.0E-59
ProSiteProfiles	TF_GTP-bd_dom (IPR000795) - T[1-285] 70.286
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[1-282] 6.66E-84
TIGRFAM	Small_GTP-bd_dom (IPR005225) - T[2-168] 9.0E-26
PRINTS	TF_GTP-bd_dom (IPR000795) - T[2-15] 1.9E-15 - T[48-56] 1.9E-15 - T[68-78] 1.9E-15 - T[84-95] 1.9E-15 - T[120-129] 1.9E-15
SUPERFAMILY	Transl_B-barrel_sf (IPR009000) - T[266-398] 4.71E-27
Pfam	EFTu-like_2 (IPR004161) - T[327-393] 9.7E-9
SUPERFAMILY	EFG_III/V (IPR035647) - T[407-483] 1.22E-18 - T[604-689] 2.06E-14
CDD	EFG_III (IPR009022) - T[408-482] 1.27392E-24
SUPERFAMILY	Ribosomal_S5_D2-typ_fold (IPR020568) - T[482-598] 2.47E-7
Gene3D	Ribosomal_S5_D2-typ_fold_subgr (IPR014721) - T[490-604] 4.9E-28 - T[682-689] 4.9E-28
SMART	EFG_V-like (IPR000640) - T[601-694] 2.5E-11
Pfam	EFG_V-like (IPR000640) - T[602-690] 8.4E-18
CDD	EFG_V (IPR035649) - T[604-687] 1.13468E-17