- Transcript 'Cisavi.CG.ENS81.R1.2...' >
- Clone 'AHC0AAA266YM11' >
- Transcript 'Cisavi.CG.ENS81.R451...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R451.139947-147158.00031.t
Possible name(s)
NTN1; NTN3; NTN5
Gene model
Location
R451 [140,049 / 147,108]
Amino acid sequence
Length: 571
>Cisavi.CG.ENS81.R451.139947-147158.00031.p
NKTRIWNLMMALLVVAFIPSTNQLRPPVLSRCYDRNKNPQECNPEFENIAHKKRVVVTET
CGENGVVSRVCDVCERTGRRSHPARYLTDINDIGNLTYWQSKTFQPGEDSDREVELTISF
GKEYELSYLYMEFASPRPAAMVIYKSMNHGKTWVPYQHYAKNCRRRFNMAFRTEVNRTNE
QEVLCSENFSEVYPYSRGIIVFNPRDGRPSDEDFDNSYILQEWVTATDVKIVVATNSGTT
PTTYSFGSSSYYAINDISIGGICKCNGHAERCLMKKGKMVCDCKHKTTGPNCDMCKAFHM
DRPPQRATKTDANECIACNCNMHAKRCRFNHDLFEKSGRISGGVCVKCRHNTDGRYCHFC
KAGYYRNNKTKSISDKRTCKLCDCNRVGSLGKHCDRDTGQCVCKEHVTRRKCNFCAKGYK
QTGSIVAPCASTYNPPPPPDSCPRRCSSARGVRVSLGKFCRMGYAVVVQVTGKLTLRRKT
RFTLQLHKTYKRGVVRFRKKERVDVEVRDRIVHCLCPKLQVKKTYLLIGKYNRSGGEPRL
AIDKGTIVMEWKNKYKRRLRSLQRRARRRKC
Nucleotide sequence
Length: 2,081
>Cisavi.CG.ENS81.R451.139947-147158.00031.t
AATAAAACTAGAATTTGGAACTTGATGATGGCGCTTCTAGTGGTCGCGTTTATTCCATCG
ACGAATCAACTGAGACCACCGGTGCTGAGTCGATGTTATGATAGGAACAAAAATCCACAA
GAATGTAACCCGGAGTTCGAGAATATAGCTCATAAGAAACGTGTGGTGGTAACAGAGACG
TGTGGGGAAAATGGCGTCGTTTCTAGAGTTTGTGACGTATGTGAACGAACTGGTCGCAGG
TCGCACCCGGCGCGATACTTGACTGACATCAACGACATAGGGAACCTGACTTACTGGCAA
TCCAAGACGTTTCAACCTGGTGAAGATAGCGACCGCGAGGTTGAACTAACAATTTCATTC
GGGAAGGAATACGAGTTGTCGTATCTCTACATGGAGTTCGCGTCGCCCCGGCCCGCAGCC
ATGGTCATATACAAGTCGATGAACCACGGAAAGACGTGGGTTCCGTACCAACATTACGCC
AAGAACTGTCGCCGGAGATTTAACATGGCGTTCAGAACAGAAGTGAACAGGACAAACGAA
CAAGAAGTTTTATGTTCGGAGAACTTCAGTGAGGTTTACCCGTATAGTCGGGGTATAATT
GTGTTTAACCCGAGGGACGGGCGACCATCAGATGAAGACTTCGACAACAGTTACATCCTC
CAAGAATGGGTGACTGCCACCGATGTCAAAATCGTGGTTGCAACCAACAGCGGAACCACC
CCAACCACCTACAGCTTCGGTTCCAGCTCGTATTACGCAATCAATGACATCAGCATCGGC
GGGATATGTAAATGCAACGGCCACGCTGAGAGGTGTTTGATGAAGAAGGGGAAAATGGTG
TGCGACTGCAAGCACAAGACCACGGGGCCGAACTGCGATATGTGCAAGGCATTCCACATG
GATCGGCCACCACAGCGAGCCACTAAGACCGACGCCAACGAATGCATTGCTTGCAATTGC
AACATGCACGCGAAGAGATGTCGGTTCAACCACGATTTGTTCGAGAAATCTGGCAGGATA
AGCGGAGGGGTGTGTGTGAAGTGTCGGCATAACACTGATGGACGGTACTGTCACTTCTGC
AAGGCTGGATATTATAGAAATAACAAAACCAAGTCGATCTCGGATAAACGGACTTGCAAA
CTTTGCGATTGCAATCGCGTCGGGTCCTTGGGCAAGCATTGCGACCGAGACACGGGTCAG
TGCGTTTGCAAGGAACACGTGACAAGAAGGAAATGTAACTTCTGCGCGAAAGGCTACAAG
CAGACCGGCTCCATCGTGGCCCCATGCGCCAGTACGTATAACCCCCCCCCCCCCCCGGAC
TCTTGCCCGCGGAGATGCAGCAGTGCCCGGGGGGTGAGGGTTTCGCTCGGGAAGTTCTGC
AGGATGGGATACGCTGTCGTCGTGCAGGTGACGGGGAAACTCACGCTGAGGAGGAAAACC
CGCTTCACCCTCCAACTCCACAAGACGTACAAACGAGGCGTCGTTCGCTTCCGGAAGAAG
GAGCGAGTCGACGTGGAAGTCCGGGATCGAATCGTCCATTGTTTGTGTCCCAAGCTGCAG
GTGAAGAAGACTTACCTCCTCATCGGGAAGTACAACCGATCCGGCGGCGAACCGCGGCTG
GCCATCGACAAAGGCACCATTGTGATGGAATGGAAGAACAAATACAAGCGGAGATTGCGG
AGTTTGCAACGAAGGGCGCGGAGGCGCAAGTGCTGAGACTTCGCCACTAGAAGACGCTAG
AGAGATGCGTTTGATGAAGATGTCATCCGAAGTTTGCCGATGTGAGATTATATGGGACAC
GTCATAAAGGACATAATGCGTGGTGGTTACGTCATAATGGTCGATGAAGTGATTTTATAC
CTATATATTCTGCTACTCGTCATGTTTTCTTTTTTATTTATTTTGTTTTGACACTGTAAA
CTTTGTGTTGTCCATAAGGTACATCCGGGTAAGTATTCACCGGATAACACCAGACATTAC
GTCATACCACTCAACCGACATCAAATACAAAATTATAACATTTCTATTTCCATCAACTGC
GAAAGTTCTGTTATGGGGAACTCCCTTGCTTTCCCCTTCTT
| Gene3D |
Laminin_N_sf (IPR038684) - T[21-283] 6.5E-81 |
| SMART |
Laminin_N (IPR008211) - T[36-261] 1.3E-65 |
| ProSiteProfiles |
Laminin_N (IPR008211) - T[38-262] 47.2 |
| Pfam |
Laminin_N (IPR008211) - T[42-261] 2.3E-60 |
| SUPERFAMILY |
Galactose-bd-like_sf (IPR008979) - T[81-159] 3.06E-5 |
| ProSiteProfiles |
Laminin_EGF (IPR002049) - T[263-317] 9.741 - T[318-381] 7.684 - T[382-431] 17.281 |
| SMART |
Laminin_EGF (IPR002049) - T[263-315] 2.4E-5 - T[318-379] 9.6E-7 - T[382-442] 5.6E-9 |
| Pfam |
Laminin_EGF (IPR002049) - T[263-304] 7.0E-6 - T[318-374] 2.7E-7 - T[382-422] 2.8E-8 |
| ProSitePatterns |
Laminin_EGF (IPR002049) - T[345-379] . |
| SUPERFAMILY |
TIMP-like_OB-fold (IPR008993) - T[438-571] 1.96E-26 |
| ProSiteProfiles |
Netrin_domain (IPR001134) - T[442-571] 21.582 |
| SMART |
Netrin_module_non-TIMP (IPR018933) - T[456-565] 2.9E-16 |
| Pfam |
Netrin_module_non-TIMP (IPR018933) - T[458-564] 1.0E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LAMC1_HUMAN | 37.805 % | 286 | 4.13E-84 |
| NET1_HUMAN | 42.933 % | 487 | 8.31E-167 |
| NET3_HUMAN | 36.14 % | 362 | 2.88E-118 |