- Clone 'AHC0AAA129YP24' >
- Transcript 'Cisavi.CG.ENS81.R451...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R451.139947-147158.00032.t
Possible name(s)
NTN1; NTN3; NTN5
Gene model
Location
R451 [140,073 / 146,743]
Amino acid sequence
Length: 602
>Cisavi.CG.ENS81.R451.139947-147158.00032.p
MMALLVVAFIPSTNQLRPPVLSRCYDRNKNPQECNPEFENIAHKKRVVVTETCGVDGRDP
FCKLVEENGVVSRVCDVCERTGRRSHPARYLTDINDIGNLTYWQSKTFQPGEDSDREVEL
TISFGKEYELSYLYMEFASPRPAAMVIYKSMNHGKTWVPYQHYAKNCRRRFNMAFRTEVN
RTNEQEVLCSENFSEVYPYSRGIIVFNPRDGRPSDEDFDNSYILQEWVTATDVKIVLSGL
NDIPRNPSAVARIASREGRSALAGGGRRRMTSPGAWGIPRMTRGGRAVATRASTTALYHA
GTRVSGATEVVATNSGTTPTTYSFGSSSYYAINDISIGGICKCNGHAERCLMKKGKMVCD
CKHKTTGPNCDMCKAFHMDRPPQRATKTDANECIACNCNMHAKRCRFNHDLFEKSGRISG
GVCVKCRHNTDGRYCHFCKAGYYRNNKTKSISDKRTCKRIPVASTPPKGNPSCPRRCSSA
RGVRVSLGKFCRMGYAVVVQVTGKLTLRRKTRFTLQLHKTYKRGVVRFRKKERVDVEVRD
RIVHCLCPKLQVKKTYLLIGKYNRSGGEPRLAIDKGTIVMEWKNKYKRRLRSLQRRARRR
KC
Nucleotide sequence
Length: 1,809
>Cisavi.CG.ENS81.R451.139947-147158.00032.t
ATGATGGCGCTTCTAGTGGTCGCGTTTATTCCATCGACGAATCAACTGAGACCACCGGTG
CTGAGTCGATGTTATGATAGGAACAAAAATCCACAAGAATGTAACCCGGAGTTCGAGAAT
ATAGCTCATAAGAAACGTGTGGTGGTAACAGAGACGTGTGGGGTGGATGGAAGAGACCCG
TTCTGTAAGCTTGTCGAGGAAAATGGCGTCGTTTCTAGAGTTTGTGACGTATGTGAACGA
ACTGGTCGCAGGTCGCACCCGGCGCGATACTTGACTGACATCAACGACATAGGGAACCTG
ACTTACTGGCAATCCAAGACGTTTCAACCTGGTGAAGATAGCGACCGCGAGGTTGAACTA
ACAATTTCATTCGGGAAGGAATACGAGTTGTCGTATCTCTACATGGAGTTCGCGTCGCCC
CGGCCCGCAGCCATGGTCATATACAAGTCGATGAACCACGGAAAGACGTGGGTTCCGTAC
CAACATTACGCCAAGAACTGTCGCCGGAGATTTAACATGGCGTTCAGAACAGAAGTGAAC
AGGACAAACGAACAAGAAGTTTTATGTTCGGAGAACTTCAGTGAGGTTTACCCGTATAGT
CGGGGTATAATTGTGTTTAACCCGAGGGACGGGCGACCATCAGATGAAGACTTCGACAAC
AGTTACATCCTCCAAGAATGGGTGACTGCCACCGATGTCAAAATCGTTCTGTCCGGGTTG
AATGACATCCCGCGTAATCCATCCGCTGTAGCAAGGATCGCTTCCAGGGAAGGAAGATCA
GCATTGGCCGGTGGTGGCAGACGACGTATGACGTCACCAGGTGCTTGGGGGATTCCCCGC
ATGACGCGCGGTGGGAGAGCAGTTGCAACAAGAGCAAGCACGACGGCTCTGTACCACGCT
GGAACCCGAGTGTCGGGCGCGACCGAGGTGGTTGCAACCAACAGCGGAACCACCCCAACC
ACCTACAGCTTCGGTTCCAGCTCGTATTACGCAATCAATGACATCAGCATCGGCGGGATA
TGTAAATGCAACGGCCACGCTGAGAGGTGTTTGATGAAGAAGGGGAAAATGGTGTGCGAC
TGCAAGCACAAGACCACGGGGCCGAACTGCGATATGTGCAAGGCATTCCACATGGATCGG
CCACCACAGCGAGCCACTAAGACCGACGCCAACGAATGCATTGCTTGCAATTGCAACATG
CACGCGAAGAGATGTCGGTTCAACCACGATTTGTTCGAGAAATCTGGCAGGATAAGCGGA
GGGGTGTGTGTGAAGTGTCGGCATAACACTGATGGACGGTACTGTCACTTCTGCAAGGCT
GGATATTATAGAAATAACAAAACCAAGTCGATCTCGGATAAACGGACTTGCAAACGAATA
CCAGTTGCCTCAACACCGCCCAAGGGAAATCCATCTTGCCCGCGGAGATGCAGCAGTGCC
CGGGGGGTGAGGGTTTCGCTCGGGAAGTTCTGCAGGATGGGATACGCTGTCGTCGTGCAG
GTGACGGGGAAACTCACGCTGAGGAGGAAAACCCGCTTCACCCTCCAACTCCACAAGACG
TACAAACGAGGCGTCGTTCGCTTCCGGAAGAAGGAGCGAGTCGACGTGGAAGTCCGGGAT
CGAATCGTCCATTGTTTGTGTCCCAAGCTGCAGGTGAAGAAGACTTACCTCCTCATCGGG
AAGTACAACCGATCCGGCGGCGAACCGCGGCTGGCCATCGACAAAGGCACCATTGTGATG
GAATGGAAGAACAAATACAAGCGGAGATTGCGGAGTTTGCAACGAAGGGCGCGGAGGCGC
AAGTGCTGA
| Gene3D |
Laminin_N_sf (IPR038684) - T[13-258] 6.9E-71 - T[303-361] 1.4E-11 |
| SMART |
Laminin_N (IPR008211) - T[28-266] 6.5E-67 |
| ProSiteProfiles |
Laminin_N (IPR008211) - T[30-340] 49.806 |
| Pfam |
Laminin_N (IPR008211) - T[34-339] 1.0E-65 |
| SUPERFAMILY |
Galactose-bd-like_sf (IPR008979) - T[85-163] 4.25E-5 |
| Pfam |
Laminin_EGF (IPR002049) - T[341-382] 7.5E-6 - T[396-452] 2.9E-7 |
| SMART |
Laminin_EGF (IPR002049) - T[341-393] 2.4E-5 - T[396-457] 9.6E-7 |
| SUPERFAMILY |
TIMP-like_OB-fold (IPR008993) - T[470-602] 9.22E-26 |
| ProSiteProfiles |
Netrin_domain (IPR001134) - T[473-602] 21.582 |
| SMART |
Netrin_module_non-TIMP (IPR018933) - T[487-596] 2.9E-16 |
| Pfam |
Netrin_module_non-TIMP (IPR018933) - T[489-595] 1.1E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LAMC1_HUMAN | 37.054 % | 162 | 7.6E-42 |
| NET1_HUMAN | 31.188 % | 281 | 9.7E-87 |
| NET3_HUMAN | 36.25 % | 181 | 6.5E-50 |