- Transcript 'Cisavi.CG.ENS81.R48....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R48.1003367-1012890.16005.t
Possible name(s)
MTREX; SKIV2L
Gene model
Location
R48 [1,004,346 / 1,012,618]
Amino acid sequence
Length: 927
>Cisavi.CG.ENS81.R48.1003367-1012890.16005.p
EALPKIETKSMDSIISGCTHEVAFQTGADIPRLLPKAAQPAKEYKFILDPFQQEALLCLD
NNQSVLVSAHTSAGKTVVAEYAIAMSLRDKQRVIYTTPIKALSNQKYRDLYEEFSDVGLM
TGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRNKERGVVWEETIIL
LPDNVRYVFLSATIPNARQFASWICHLHKQPCHVVYTDYRPVPLQHYIFPAGGDGLHLVV
DDNGDFREDNFNTAMAGIMRKVISNDGASKGVNGKSGCVQIIELVMERKFLPAIVFSFSK
KECEFYANQVLKLKFNSEAERKLVQEVFDNAMDSLSEEDRRLPQVEACLPFVLNGIGIHH
GGLLPIIKETIEILFSEGLIKVLFATETFSMGVNMPAHTVIFTSIRKFDGKDFRWITGGE
YIQMSGRAGRRGMDENGLVIMMVDEKLSPNVGKALVKGSPDPLDSAFRLTYNMVLNLLRV
EEINPEYMLEKSFYQFQHYTAIPEMLANVTKLEKDYCGMKIKEEEESMTYYRIRQQLNKL
ATQLEDFVHLPKFCLPFLQPGRLVKVRNGEHDFGWEPQYVVDVLLNCDKEGLNSIAVRLP
RPAKDATRSEMAVVPIMLPLIKALSSVRLFLPKDLRPLDNRQSLLLQIFYLYQEVNKRFP
DGIPILDPIEDMVIKDERLKSIVRKTEAFERRMYKHSLHSRSDMAQIYQQCEKKAKVSDV
KIALKKARTILQMDELKCRKRVLRRLGYATMSDVIETKGRVACEISAADELLLTELIFNG
VFNNLTPAQCAALLCCFIFDEKSKSIPKLSEELASPLRQLHEIARKIAKVSNESKLPLEE
EEYVQKFKTMLMDVVHSWCNGSTFAQISQMTDVFEGSIIRCMRRLEELLREMCHAAKAIG
NTHLENKFSEAIQLIKRDIIFAASLYL
Nucleotide sequence
Length: 2,960
>Cisavi.CG.ENS81.R48.1003367-1012890.16005.t
AAAACTCTCACATAAGGGCTATCAGCAAAAGACCAAAGCAATCTGATGAGACAGAAAATT
TGCCGGAAAAGAAGAAAAAATACGATGAGAACAAAATAACTTCAGACGATGTTGAAACCT
TGAGTGAACTACCACCACCTGCTAAAGATGACACAGAAGACTTTTCGAGTTTAATAGAAG
CTTTACCAAAAATTGAGACCAAATCAATGGATTCAATCATCTCCGGCTGCACACATGAAG
TAGCTTTTCAAACTGGTGCAGACATCCCACGATTGCTTCCGAAAGCTGCCCAACCAGCGA
AGGAATACAAGTTCATTCTGGATCCCTTCCAACAGGAAGCCTTGTTGTGTCTAGATAACA
ATCAGTCTGTCCTTGTATCAGCCCACACATCCGCTGGAAAAACGGTAGTGGCAGAATATG
CCATAGCAATGAGTCTTCGCGACAAACAGCGTGTGATCTACACAACACCAATCAAAGCGC
TCAGTAACCAAAAGTATAGGGACCTCTATGAGGAGTTTTCCGATGTGGGATTAATGACGG
GTGACGTTACGATAAACCCGACTGCTTCATGTCTAGTTATGACAACAGAGATCTTGCGTA
GTATGTTGTACCGGGGTTCAGAAGTGATGCGTGAGGTCGCATGGGTCATCTTTGATGAGA
TCCATTACATGAGGAACAAAGAGCGCGGGGTGGTGTGGGAGGAAACGATCATCCTGCTCC
CTGACAATGTCCGCTACGTCTTCCTCTCCGCCACCATCCCCAACGCTCGGCAATTTGCAT
CCTGGATCTGCCATCTGCACAAGCAGCCGTGCCACGTGGTGTACACTGACTACCGACCGG
TGCCACTGCAACATTACATCTTCCCTGCTGGTGGAGACGGCCTTCATTTGGTGGTGGATG
ATAATGGTGATTTTCGTGAAGATAATTTTAACACAGCGATGGCAGGGATAATGCGAAAAG
TGATTTCCAACGACGGGGCAAGCAAGGGGGTCAACGGCAAAAGTGGCTGTGTGCAAATCA
TTGAACTTGTCATGGAGCGGAAGTTTCTACCAGCGATTGTCTTCTCGTTCAGCAAGAAGG
AATGTGAATTCTACGCAAATCAAGTCCTAAAACTCAAGTTTAACTCAGAGGCCGAGCGGA
AATTGGTGCAGGAAGTATTCGACAACGCAATGGATTCTCTCTCAGAGGAAGACCGACGGC
TCCCTCAGGTGGAAGCATGTCTGCCGTTCGTTTTAAACGGAATCGGAATTCACCACGGAG
GTCTACTGCCCATTATCAAGGAAACAATTGAAATTCTTTTCTCCGAAGGGTTGATCAAGG
TGTTATTTGCAACGGAGACCTTTTCGATGGGTGTGAACATGCCTGCACATACCGTCATAT
TCACCAGCATTCGTAAATTTGATGGCAAAGATTTTAGATGGATTACAGGAGGGGAGTATA
TACAGATGAGTGGAAGAGCAGGGAGGAGAGGAATGGATGAGAACGGCCTTGTCATCATGA
TGGTCGATGAAAAGTTATCCCCGAATGTTGGCAAAGCTCTTGTTAAGGGATCACCGGACC
CCCTTGACTCAGCGTTCAGACTAACATACAACATGGTGCTTAACCTACTGCGGGTGGAAG
AGATTAACCCAGAGTATATGCTCGAGAAATCCTTCTACCAGTTTCAACATTACACTGCCA
TACCGGAGATGCTTGCAAATGTCACGAAATTGGAGAAAGATTACTGTGGGATGAAGATAA
AGGAAGAAGAAGAATCAATGACTTATTACCGCATCCGGCAGCAACTCAATAAGCTTGCTA
CTCAACTCGAGGACTTTGTACATCTTCCCAAGTTCTGCTTGCCTTTCCTGCAACCTGGCA
GGCTAGTAAAGGTGCGAAATGGAGAGCACGATTTTGGATGGGAGCCGCAATATGTGGTGG
ATGTGTTGCTCAACTGTGACAAGGAGGGATTAAATTCAATTGCCGTCAGGTTGCCACGAC
CTGCCAAAGATGCCACGCGAAGCGAAATGGCGGTTGTGCCAATCATGCTGCCACTAATTA
AAGCACTGAGCTCGGTCAGGCTGTTCCTTCCTAAAGATTTAAGGCCGCTTGATAACAGAC
AGTCCTTGCTGCTTCAAATTTTTTATCTTTACCAGGAAGTTAACAAGAGGTTTCCGGATG
GAATCCCCATTCTGGACCCCATTGAAGATATGGTCATCAAGGACGAGCGTTTAAAGTCCA
TCGTCCGGAAGACCGAGGCATTTGAGAGAAGGATGTACAAACATTCCTTGCATTCCAGGT
CCGACATGGCCCAGATATATCAACAATGCGAGAAAAAGGCAAAAGTAAGTGATGTAAAAA
TAGCGTTGAAGAAAGCACGGACGATCTTACAAATGGACGAGCTGAAGTGTAGGAAGCGAG
TTCTGAGGCGACTTGGGTACGCCACTATGTCCGACGTCATTGAAACCAAAGGTCGAGTAG
CATGCGAGATCAGTGCTGCCGATGAACTTCTCCTCACAGAGCTCATCTTTAACGGGGTGT
TCAACAACCTCACCCCTGCACAGTGCGCCGCATTGTTGTGTTGTTTTATATTTGATGAGA
AGTCGAAAAGCATTCCAAAGTTAAGCGAGGAACTGGCAAGTCCATTACGACAGTTGCATG
AAATAGCAAGAAAAATTGCCAAGGTGTCAAACGAGTCCAAACTCCCATTGGAAGAAGAGG
AATACGTCCAGAAGTTTAAAACGATGCTGATGGATGTGGTTCACTCCTGGTGCAACGGAT
CCACTTTTGCACAAATCTCACAAATGACAGATGTCTTTGAAGGAAGCATAATAAGGTGCA
TGAGAAGACTTGAAGAGCTGCTGCGGGAAATGTGCCACGCTGCCAAAGCAATCGGGAACA
CACATCTTGAAAACAAGTTTTCTGAAGCGATCCAACTTATAAAAAGAGACATCATTTTCG
CTGCTAGCTTGTATTTATAA
| PIRSF |
Ski2-like (IPR016438) - T[6-597] 3.9E-284 - T[580-927] 2.1E-103 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[44-227] 2.6E-31 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[50-195] 2.7E-16 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[56-212] 23.166 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[59-197] 2.01E-46 - T[257-312] 2.01E-46 - T[352-446] 2.01E-46 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[277-481] 12.107 |
| CDD |
Helicase_C (IPR001650) - T[280-442] 4.33489E-13 |
| SMART |
Helicase_C (IPR001650) - T[343-432] 6.2E-16 |
| Pfam |
Helicase_C (IPR001650) - T[356-432] 4.9E-7 |
| Pfam |
rRNA_proc-arch_dom (IPR025696) - T[486-726] 3.8E-63 |
| SMART |
Ski2_C (IPR012961) - T[750-927] 5.3E-95 |
| Pfam |
Ski2_C (IPR012961) - T[753-922] 1.4E-58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MTREX_HUMAN | 67.786 % | 1353 | 0 |
| SKIV2_HUMAN | 36.59 % | 570 | 0 |