Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 927

>Cisavi.CG.ENS81.R48.1003367-1012890.16005.p
EALPKIETKSMDSIISGCTHEVAFQTGADIPRLLPKAAQPAKEYKFILDPFQQEALLCLD
NNQSVLVSAHTSAGKTVVAEYAIAMSLRDKQRVIYTTPIKALSNQKYRDLYEEFSDVGLM
TGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRNKERGVVWEETIIL
LPDNVRYVFLSATIPNARQFASWICHLHKQPCHVVYTDYRPVPLQHYIFPAGGDGLHLVV
DDNGDFREDNFNTAMAGIMRKVISNDGASKGVNGKSGCVQIIELVMERKFLPAIVFSFSK
KECEFYANQVLKLKFNSEAERKLVQEVFDNAMDSLSEEDRRLPQVEACLPFVLNGIGIHH
GGLLPIIKETIEILFSEGLIKVLFATETFSMGVNMPAHTVIFTSIRKFDGKDFRWITGGE
YIQMSGRAGRRGMDENGLVIMMVDEKLSPNVGKALVKGSPDPLDSAFRLTYNMVLNLLRV
EEINPEYMLEKSFYQFQHYTAIPEMLANVTKLEKDYCGMKIKEEEESMTYYRIRQQLNKL
ATQLEDFVHLPKFCLPFLQPGRLVKVRNGEHDFGWEPQYVVDVLLNCDKEGLNSIAVRLP
RPAKDATRSEMAVVPIMLPLIKALSSVRLFLPKDLRPLDNRQSLLLQIFYLYQEVNKRFP
DGIPILDPIEDMVIKDERLKSIVRKTEAFERRMYKHSLHSRSDMAQIYQQCEKKAKVSDV
KIALKKARTILQMDELKCRKRVLRRLGYATMSDVIETKGRVACEISAADELLLTELIFNG
VFNNLTPAQCAALLCCFIFDEKSKSIPKLSEELASPLRQLHEIARKIAKVSNESKLPLEE
EEYVQKFKTMLMDVVHSWCNGSTFAQISQMTDVFEGSIIRCMRRLEELLREMCHAAKAIG
NTHLENKFSEAIQLIKRDIIFAASLYL

Nucleotide sequence

Length: 2,960

>Cisavi.CG.ENS81.R48.1003367-1012890.16005.t
AAAACTCTCACATAAGGGCTATCAGCAAAAGACCAAAGCAATCTGATGAGACAGAAAATT
TGCCGGAAAAGAAGAAAAAATACGATGAGAACAAAATAACTTCAGACGATGTTGAAACCT
TGAGTGAACTACCACCACCTGCTAAAGATGACACAGAAGACTTTTCGAGTTTAATAGAAG
CTTTACCAAAAATTGAGACCAAATCAATGGATTCAATCATCTCCGGCTGCACACATGAAG
TAGCTTTTCAAACTGGTGCAGACATCCCACGATTGCTTCCGAAAGCTGCCCAACCAGCGA
AGGAATACAAGTTCATTCTGGATCCCTTCCAACAGGAAGCCTTGTTGTGTCTAGATAACA
ATCAGTCTGTCCTTGTATCAGCCCACACATCCGCTGGAAAAACGGTAGTGGCAGAATATG
CCATAGCAATGAGTCTTCGCGACAAACAGCGTGTGATCTACACAACACCAATCAAAGCGC
TCAGTAACCAAAAGTATAGGGACCTCTATGAGGAGTTTTCCGATGTGGGATTAATGACGG
GTGACGTTACGATAAACCCGACTGCTTCATGTCTAGTTATGACAACAGAGATCTTGCGTA
GTATGTTGTACCGGGGTTCAGAAGTGATGCGTGAGGTCGCATGGGTCATCTTTGATGAGA
TCCATTACATGAGGAACAAAGAGCGCGGGGTGGTGTGGGAGGAAACGATCATCCTGCTCC
CTGACAATGTCCGCTACGTCTTCCTCTCCGCCACCATCCCCAACGCTCGGCAATTTGCAT
CCTGGATCTGCCATCTGCACAAGCAGCCGTGCCACGTGGTGTACACTGACTACCGACCGG
TGCCACTGCAACATTACATCTTCCCTGCTGGTGGAGACGGCCTTCATTTGGTGGTGGATG
ATAATGGTGATTTTCGTGAAGATAATTTTAACACAGCGATGGCAGGGATAATGCGAAAAG
TGATTTCCAACGACGGGGCAAGCAAGGGGGTCAACGGCAAAAGTGGCTGTGTGCAAATCA
TTGAACTTGTCATGGAGCGGAAGTTTCTACCAGCGATTGTCTTCTCGTTCAGCAAGAAGG
AATGTGAATTCTACGCAAATCAAGTCCTAAAACTCAAGTTTAACTCAGAGGCCGAGCGGA
AATTGGTGCAGGAAGTATTCGACAACGCAATGGATTCTCTCTCAGAGGAAGACCGACGGC
TCCCTCAGGTGGAAGCATGTCTGCCGTTCGTTTTAAACGGAATCGGAATTCACCACGGAG
GTCTACTGCCCATTATCAAGGAAACAATTGAAATTCTTTTCTCCGAAGGGTTGATCAAGG
TGTTATTTGCAACGGAGACCTTTTCGATGGGTGTGAACATGCCTGCACATACCGTCATAT
TCACCAGCATTCGTAAATTTGATGGCAAAGATTTTAGATGGATTACAGGAGGGGAGTATA
TACAGATGAGTGGAAGAGCAGGGAGGAGAGGAATGGATGAGAACGGCCTTGTCATCATGA
TGGTCGATGAAAAGTTATCCCCGAATGTTGGCAAAGCTCTTGTTAAGGGATCACCGGACC
CCCTTGACTCAGCGTTCAGACTAACATACAACATGGTGCTTAACCTACTGCGGGTGGAAG
AGATTAACCCAGAGTATATGCTCGAGAAATCCTTCTACCAGTTTCAACATTACACTGCCA
TACCGGAGATGCTTGCAAATGTCACGAAATTGGAGAAAGATTACTGTGGGATGAAGATAA
AGGAAGAAGAAGAATCAATGACTTATTACCGCATCCGGCAGCAACTCAATAAGCTTGCTA
CTCAACTCGAGGACTTTGTACATCTTCCCAAGTTCTGCTTGCCTTTCCTGCAACCTGGCA
GGCTAGTAAAGGTGCGAAATGGAGAGCACGATTTTGGATGGGAGCCGCAATATGTGGTGG
ATGTGTTGCTCAACTGTGACAAGGAGGGATTAAATTCAATTGCCGTCAGGTTGCCACGAC
CTGCCAAAGATGCCACGCGAAGCGAAATGGCGGTTGTGCCAATCATGCTGCCACTAATTA
AAGCACTGAGCTCGGTCAGGCTGTTCCTTCCTAAAGATTTAAGGCCGCTTGATAACAGAC
AGTCCTTGCTGCTTCAAATTTTTTATCTTTACCAGGAAGTTAACAAGAGGTTTCCGGATG
GAATCCCCATTCTGGACCCCATTGAAGATATGGTCATCAAGGACGAGCGTTTAAAGTCCA
TCGTCCGGAAGACCGAGGCATTTGAGAGAAGGATGTACAAACATTCCTTGCATTCCAGGT
CCGACATGGCCCAGATATATCAACAATGCGAGAAAAAGGCAAAAGTAAGTGATGTAAAAA
TAGCGTTGAAGAAAGCACGGACGATCTTACAAATGGACGAGCTGAAGTGTAGGAAGCGAG
TTCTGAGGCGACTTGGGTACGCCACTATGTCCGACGTCATTGAAACCAAAGGTCGAGTAG
CATGCGAGATCAGTGCTGCCGATGAACTTCTCCTCACAGAGCTCATCTTTAACGGGGTGT
TCAACAACCTCACCCCTGCACAGTGCGCCGCATTGTTGTGTTGTTTTATATTTGATGAGA
AGTCGAAAAGCATTCCAAAGTTAAGCGAGGAACTGGCAAGTCCATTACGACAGTTGCATG
AAATAGCAAGAAAAATTGCCAAGGTGTCAAACGAGTCCAAACTCCCATTGGAAGAAGAGG
AATACGTCCAGAAGTTTAAAACGATGCTGATGGATGTGGTTCACTCCTGGTGCAACGGAT
CCACTTTTGCACAAATCTCACAAATGACAGATGTCTTTGAAGGAAGCATAATAAGGTGCA
TGAGAAGACTTGAAGAGCTGCTGCGGGAAATGTGCCACGCTGCCAAAGCAATCGGGAACA
CACATCTTGAAAACAAGTTTTCTGAAGCGATCCAACTTATAAAAAGAGACATCATTTTCG
CTGCTAGCTTGTATTTATAA

InterProScan

PIRSF	Ski2-like (IPR016438) - T[6-597] 3.9E-284 - T[580-927] 2.1E-103
SMART	Helicase_ATP-bd (IPR014001) - T[44-227] 2.6E-31
Pfam	DEAD/DEAH_box_helicase_dom (IPR011545) - T[50-195] 2.7E-16
ProSiteProfiles	Helicase_ATP-bd (IPR014001) - T[56-212] 23.166
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[59-197] 2.01E-46 - T[257-312] 2.01E-46 - T[352-446] 2.01E-46
ProSiteProfiles	Helicase_C (IPR001650) - T[277-481] 12.107
CDD	Helicase_C (IPR001650) - T[280-442] 4.33489E-13
SMART	Helicase_C (IPR001650) - T[343-432] 6.2E-16
Pfam	Helicase_C (IPR001650) - T[356-432] 4.9E-7
Pfam	rRNA_proc-arch_dom (IPR025696) - T[486-726] 3.8E-63
SMART	Ski2_C (IPR012961) - T[750-927] 5.3E-95
Pfam	Ski2_C (IPR012961) - T[753-922] 1.4E-58