- Clone 'CCTT10342' >
- Region 'REG00000447' >
- Clone 'cies002g20' >
- Clone 'cien98738' >
- Transcript 'Cisavi.CG.ENS81.R48....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R48.1003367-1012890.16008.t
Possible name(s)
MTREX; SKIV2L
Gene model
Location
R48 [1,004,636 / 1,012,885]
Amino acid sequence
Length: 960
>Cisavi.CG.ENS81.R48.1003367-1012890.16008.p
ALPKIETKSMDSIISGCTHEVAFQTGADIPRLLPKAAQPAKEYKFILDPFQQEALLCLDN
NQSVLVSAHTSAGKTVVAEYAIAMSLRDKQRVIYTTPIKALSNQKYRDLYEEFSDVGLMT
GDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRNKERGVVWEETIILL
PDNVRYVFLSATIPNARQFASWICHLHKQPCHVVYTDYRPVPLQHYIFPAGGDGLHLVVD
DNGDFREDNFNTAMAVLRDSGDNAKSDFQRRGKQGGQRVSFFMGKSGCVQIIELVMERKF
LPAIVFSFSKKECEFYANQVLKLKFNSEAERKLVQEVFDNAMDSLSEEDRRLPQVEACLP
FVLNGIGIHHGGLLPIIKETIEILFSEGLIKVLFATETFSMGVNMPAHTVIFTSIRKFDG
KDFRWITGGEYIQMSGRAGRRGMDENGLVIMMVDEKLSPNVGKALVKGSPDPLDSAFRLT
YNMVLNLLRVEEINPEYMLEKSFYQFQHYTAIPEMLANVTKLEKDYCGMKIKEEEESMTY
YRIRQQLNKLATQLEDFVHLPKFCLPFLQPGRLVKVRNGEHDFGWGVVVNFQKKQPKPSG
PMRTDEEPEPQYVVDVLLNCDKEGLNSIAVRLPRPAKDATRSEMAVVPIMLPLIKALSSV
RLFLPKDLRPLDNRQSLLRALEEVNKRFPDGIPILDPIEDMVIKDERLKSIVRKTEAFER
RMYKHSLHSRSDMAQIYQQCEKKAKLANKVKEAKRALKKARTILQMDELKCRKRVLRRLG
YATMSDVIETKGRVACEISAADELLLTELIFNGVFNNLTPAQCAALLCCFIFDEKSKSIP
KLSEELASPLRQLHEIARKIAKVSNESKLPLEEEEYVQKFKTMLMDVVHSWCNGSTFAQI
SQMTDVFEGSIIRCMRRLEELLREMCHAAKAIGNTHLENKFSEAIQLIKRDIIFAASLYL
Nucleotide sequence
Length: 3,150
>Cisavi.CG.ENS81.R48.1003367-1012890.16008.t
GCTTTACCAAAAATTGAGACCAAATCAATGGATTCAATCATCTCCGGCTGCACACATGAA
GTAGCTTTTCAAACTGGTGCAGACATCCCACGATTGCTTCCGAAAGCTGCCCAACCAGCG
AAGGAATACAAGTTCATTCTGGATCCCTTCCAACAGGAAGCCTTGTTGTGTCTAGATAAC
AATCAGTCTGTCCTTGTATCAGCCCACACATCCGCTGGAAAAACGGTAGTGGCAGAATAT
GCCATAGCAATGAGTCTTCGCGACAAACAGCGTGTGATCTACACAACACCAATCAAAGCG
CTCAGTAACCAAAAGTATAGGGACCTCTATGAGGAGTTTTCCGATGTGGGATTAATGACG
GGTGACGTTACGATAAACCCGACTGCTTCATGTCTAGTTATGACAACAGAGATCTTGCGT
AGTATGTTGTACCGGGGTTCAGAAGTGATGCGTGAGGTCGCATGGGTCATCTTTGATGAG
ATCCATTACATGAGGAACAAAGAGCGCGGGGTGGTGTGGGAGGAAACGATCATCCTGCTC
CCTGACAATGTCCGCTACGTCTTCCTCTCCGCCACCATCCCCAACGCTCGGCAATTTGCA
TCCTGGATCTGCCATCTGCACAAGCAGCCGTGCCACGTGGTGTACACTGACTACCGACCG
GTGCCACTGCAACATTACATCTTCCCTGCTGGTGGAGACGGCCTTCATTTGGTGGTGGAT
GATAATGGTGATTTTCGTGAAGATAATTTTAACACAGCGATGGCAGTGCTCAGGGATTCA
GGGGATAATGCGAAAAGTGATTTCCAACGACGGGGCAAGCAAGGGGGTCAACGTGTAAGT
TTCTTTATGGGCAAAAGTGGCTGTGTGCAAATCATTGAACTTGTCATGGAGCGGAAGTTT
CTACCAGCGATTGTCTTCTCGTTCAGCAAGAAGGAATGTGAATTCTACGCAAATCAAGTC
CTAAAACTCAAGTTTAACTCAGAGGCCGAGCGGAAATTGGTGCAGGAAGTATTCGACAAC
GCAATGGATTCTCTCTCAGAGGAAGACCGACGGCTCCCTCAGGTGGAAGCATGTCTGCCG
TTCGTTTTAAACGGAATCGGAATTCACCACGGAGGTCTACTGCCCATTATCAAGGAAACA
ATTGAAATTCTTTTCTCCGAAGGGTTGATCAAGGTGTTATTTGCAACGGAGACCTTTTCG
ATGGGTGTGAACATGCCTGCACATACCGTCATATTCACCAGCATTCGTAAATTTGATGGC
AAAGATTTTAGATGGATTACAGGAGGGGAGTATATACAGATGAGTGGAAGAGCAGGGAGG
AGAGGAATGGATGAGAACGGCCTTGTCATCATGATGGTCGATGAAAAGTTATCCCCGAAT
GTTGGCAAAGCTCTTGTTAAGGGATCACCGGACCCCCTTGACTCAGCGTTCAGACTAACA
TACAACATGGTGCTTAACCTACTGCGGGTGGAAGAGATTAACCCAGAGTATATGCTCGAG
AAATCCTTCTACCAGTTTCAACATTACACTGCCATACCGGAGATGCTTGCAAATGTCACG
AAATTGGAGAAAGATTACTGTGGGATGAAGATAAAGGAAGAAGAAGAATCAATGACTTAT
TACCGCATCCGGCAGCAACTCAATAAGCTTGCTACTCAACTCGAGGACTTTGTACATCTT
CCCAAGTTCTGCTTGCCTTTCCTGCAACCTGGCAGGCTAGTAAAGGTGCGAAATGGAGAG
CACGATTTTGGATGGGGTGTGGTGGTCAACTTTCAGAAGAAACAACCCAAACCAAGTGGC
CCCATGCGCACCGACGAGGAACCAGAGCCGCAATATGTGGTGGATGTGTTGCTCAACTGT
GACAAGGAGGGATTAAATTCAATTGCCGTCAGGTTGCCACGACCTGCCAAAGATGCCACG
CGAAGCGAAATGGCGGTTGTGCCAATCATGCTGCCACTAATTAAAGCACTGAGCTCGGTC
AGGCTGTTCCTTCCTAAAGATTTAAGGCCGCTTGATAACAGACAGTCCTTGCTGCGTGCG
TTGGAGGAAGTTAACAAGAGGTTTCCGGATGGAATCCCCATTCTGGACCCCATTGAAGAT
ATGGTCATCAAGGACGAGCGTTTAAAGTCCATCGTCCGGAAGACCGAGGCATTTGAGAGA
AGGATGTACAAACATTCCTTGCATTCCAGGTCCGACATGGCCCAGATATATCAACAATGC
GAGAAAAAGGCAAAATTGGCGAACAAAGTAAAAGAGGCGAAAAGAGCGTTGAAGAAAGCA
CGGACGATCTTACAAATGGACGAGCTGAAGTGTAGGAAGCGAGTTCTGAGGCGACTTGGG
TACGCCACTATGTCCGACGTCATTGAAACCAAAGGTCGAGTAGCATGCGAGATCAGTGCT
GCCGATGAACTTCTCCTCACAGAGCTCATCTTTAACGGGGTGTTCAACAACCTCACCCCT
GCACAGTGCGCCGCATTGTTGTGTTGTTTTATATTTGATGAGAAGTCGAAAAGCATTCCA
AAGTTAAGCGAGGAACTGGCAAGTCCATTACGACAGTTGCATGAAATAGCAAGAAAAATT
GCCAAGGTGTCAAACGAGTCCAAACTCCCATTGGAAGAAGAGGAATACGTCCAGAAGTTT
AAAACGATGCTGATGGATGTGGTTCACTCCTGGTGCAACGGATCCACTTTTGCACAAATC
TCACAAATGACAGATGTCTTTGAAGGAAGCATAATAAGGTGCATGAGAAGACTTGAAGAG
CTGCTGCGGGAAATGTGCCACGCTGCCAAAGCAATCGGGAACACACATCTTGAAAACAAG
TTTTCTGAAGCGATCCAACTTATAAAAAGAGACATCATTTTCGCTGCTAGCTTGTATTTA
TAATAAATCAATAGCGTCAATTTTTTTAATTTTAAGGTGCACAGAAACGGGTAAAATAAA
AGGCAAATGGTTTGCCTACAATTCAATAGGTCAAAGTCCCCATTTGATTTGTTCCAATTT
AACAACCACTGCCTTCACTACAATGATGTTTTCGCAACAATTTTCAATAATGAAGTTGTC
ATTTGAGTGGTTTGAGGCCCAATTTCGCCCTCAGTTCGTTCGCTTCCTGGATTTCCAAAT
CTTCATTATTTTTCGCCTTCTTGCTATGCT
| PIRSF |
Ski2-like (IPR016438) - T[6-960] 0.0 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[43-226] 2.6E-31 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[49-194] 2.9E-16 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[55-211] 23.166 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[58-196] 2.39E-46 - T[266-322] 2.39E-46 - T[362-456] 2.39E-46 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[287-491] 12.107 |
| CDD |
Helicase_C (IPR001650) - T[290-452] 3.08633E-13 |
| SMART |
Helicase_C (IPR001650) - T[353-442] 6.2E-16 |
| Pfam |
Helicase_C (IPR001650) - T[366-442] 5.2E-7 |
| Pfam |
rRNA_proc-arch_dom (IPR025696) - T[496-759] 1.5E-81 |
| SMART |
Ski2_C (IPR012961) - T[783-960] 5.3E-95 |
| Pfam |
Ski2_C (IPR012961) - T[786-955] 1.5E-58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MTREX_HUMAN | 69.167 % | 1408 | 0 |
| SKIV2_HUMAN | 36.749 % | 581 | 0 |