- Clone 'cima876089' >
- Region 'REG00001351' >
- Transcript 'Cisavi.CG.ENS81.R48....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R48.1003367-1012890.16010.t
Possible name(s)
MTREX; SKIV2L
Gene model
Location
R48 [1,004,747 / 1,012,618]
Amino acid sequence
Length: 929
>Cisavi.CG.ENS81.R48.1003367-1012890.16010.p
QPAKEYKFILDPFQQEALLCLDNNQSVLVSAHTSAGKTVVAEYAIAMSLRDKQRVIYTTP
IKALSNQKYRDLYEEFSDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVI
FDEIHYMRNKERGVVWEETIILLPDNVRYVFLSATIPNARQFASWICHLHKQPCHVVYTD
YRPVPLQHYIFPAGGDGLHLVVDDNGDFREDNFNTAMAVLRDSGDNAKSDFQRRGKQGGQ
RGKSGCVQIIELVMERKFLPAIVFSFSKKECEFYANQVLKLKFNSEAERKLVQEVFDNAM
DSLSEEDRRLPQVEACLPFVLNGIGIHHGGLLPIIKETIEILFSEGLIKVLFATETFSMG
VNMPAHTVIFTSIRKFDGKDFRWITGGEYIQMSGRAGRRGMDENGLVIMMVDEKLSPNVG
KALVKGSPDPLDSAFRLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYTAIPEMLANVTKL
EKDYCGMKIKEEEESMTYYRIRQQLNKLATQLEDFVHLPKFCLPFLQPGRLVKLLYSRGE
VGEAVRNGEHDFGWGVVVNFQKKQPKPSGPMRTDEEPEPQYVVDVLLNCDKEGLNSIAVR
LPRPAKDATRSEMAVVPIMLPLIKALSSVRLFLPKDLRPLDNRQSLLRALEEVNKRFPDG
IPILDPIEDMVIKDERLKSIVRKTEAFERRMYKHSLHSRSDMAQIYQQCEKKAKLANKVK
EAKRALKKARTILQMDELKCRKRVLRRLGYATMSDVIETKGRVACEISAADELLLTELIF
NGVFNNLTPAQCAALLCCFIFDEKSKSIPKLSEELASPLRQLHEIARKIAKVSNESKLPL
EEEEYVQKFKTMLMDVVHSWCNGSTFAQISQMTDVFEGSIIRCMRRLEELLREMCHAAKA
IGNTHLENKFSEAIQLIKRDIIFAASLYL
Nucleotide sequence
Length: 2,790
>Cisavi.CG.ENS81.R48.1003367-1012890.16010.t
CAACCAGCGAAGGAATACAAGTTCATTCTGGATCCCTTCCAACAGGAAGCCTTGTTGTGT
CTAGATAACAATCAGTCTGTCCTTGTATCAGCCCACACATCCGCTGGAAAAACGGTAGTG
GCAGAATATGCCATAGCAATGAGTCTTCGCGACAAACAGCGTGTGATCTACACAACACCA
ATCAAAGCGCTCAGTAACCAAAAGTATAGGGACCTCTATGAGGAGTTTTCCGATGTGGGA
TTAATGACGGGTGACGTTACGATAAACCCGACTGCTTCATGTCTAGTTATGACAACAGAG
ATCTTGCGTAGTATGTTGTACCGGGGTTCAGAAGTGATGCGTGAGGTCGCATGGGTCATC
TTTGATGAGATCCATTACATGAGGAACAAAGAGCGCGGGGTGGTGTGGGAGGAAACGATC
ATCCTGCTCCCTGACAATGTCCGCTACGTCTTCCTCTCCGCCACCATCCCCAACGCTCGG
CAATTTGCATCCTGGATCTGCCATCTGCACAAGCAGCCGTGCCACGTGGTGTACACTGAC
TACCGACCGGTGCCACTGCAACATTACATCTTCCCTGCTGGTGGAGACGGCCTTCATTTG
GTGGTGGATGATAATGGTGATTTTCGTGAAGATAATTTTAACACAGCGATGGCAGTGCTC
AGGGATTCAGGGGATAATGCGAAAAGTGATTTCCAACGACGGGGCAAGCAAGGGGGTCAA
CGTGGCAAAAGTGGCTGTGTGCAAATCATTGAACTTGTCATGGAGCGGAAGTTTCTACCA
GCGATTGTCTTCTCGTTCAGCAAGAAGGAATGTGAATTCTACGCAAATCAAGTCCTAAAA
CTCAAGTTTAACTCAGAGGCCGAGCGGAAATTGGTGCAGGAAGTATTCGACAACGCAATG
GATTCTCTCTCAGAGGAAGACCGACGGCTCCCTCAGGTGGAAGCATGTCTGCCGTTCGTT
TTAAACGGAATCGGAATTCACCACGGAGGTCTACTGCCCATTATCAAGGAAACAATTGAA
ATTCTTTTCTCCGAAGGGTTGATCAAGGTGTTATTTGCAACGGAGACCTTTTCGATGGGT
GTGAACATGCCTGCACATACCGTCATATTCACCAGCATTCGTAAATTTGATGGCAAAGAT
TTTAGATGGATTACAGGAGGGGAGTATATACAGATGAGTGGAAGAGCAGGGAGGAGAGGA
ATGGATGAGAACGGCCTTGTCATCATGATGGTCGATGAAAAGTTATCCCCGAATGTTGGC
AAAGCTCTTGTTAAGGGATCACCGGACCCCCTTGACTCAGCGTTCAGACTAACATACAAC
ATGGTGCTTAACCTACTGCGGGTGGAAGAGATTAACCCAGAGTATATGCTCGAGAAATCC
TTCTACCAGTTTCAACATTACACTGCCATACCGGAGATGCTTGCAAATGTCACGAAATTG
GAGAAAGATTACTGTGGGATGAAGATAAAGGAAGAAGAAGAATCAATGACTTATTACCGC
ATCCGGCAGCAACTCAATAAGCTTGCTACTCAACTCGAGGACTTTGTACATCTTCCCAAG
TTCTGCTTGCCTTTCCTGCAACCTGGCAGGCTAGTAAAGTTGTTATATTCAAGGGGTGAA
GTAGGCGAAGCTGTGCGAAATGGAGAGCACGATTTTGGATGGGGTGTGGTGGTCAACTTT
CAGAAGAAACAACCCAAACCAAGTGGCCCCATGCGCACCGACGAGGAACCAGAGCCGCAA
TATGTGGTGGATGTGTTGCTCAACTGTGACAAGGAGGGATTAAATTCAATTGCCGTCAGG
TTGCCACGACCTGCCAAAGATGCCACGCGAAGCGAAATGGCGGTTGTGCCAATCATGCTG
CCACTAATTAAAGCACTGAGCTCGGTCAGGCTGTTCCTTCCTAAAGATTTAAGGCCGCTT
GATAACAGACAGTCCTTGCTGCGTGCGTTGGAGGAAGTTAACAAGAGGTTTCCGGATGGA
ATCCCCATTCTGGACCCCATTGAAGATATGGTCATCAAGGACGAGCGTTTAAAGTCCATC
GTCCGGAAGACCGAGGCATTTGAGAGAAGGATGTACAAACATTCCTTGCATTCCAGGTCC
GACATGGCCCAGATATATCAACAATGCGAGAAAAAGGCAAAATTGGCGAACAAAGTAAAA
GAGGCGAAAAGAGCGTTGAAGAAAGCACGGACGATCTTACAAATGGACGAGCTGAAGTGT
AGGAAGCGAGTTCTGAGGCGACTTGGGTACGCCACTATGTCCGACGTCATTGAAACCAAA
GGTCGAGTAGCATGCGAGATCAGTGCTGCCGATGAACTTCTCCTCACAGAGCTCATCTTT
AACGGGGTGTTCAACAACCTCACCCCTGCACAGTGCGCCGCATTGTTGTGTTGTTTTATA
TTTGATGAGAAGTCGAAAAGCATTCCAAAGTTAAGCGAGGAACTGGCAAGTCCATTACGA
CAGTTGCATGAAATAGCAAGAAAAATTGCCAAGGTGTCAAACGAGTCCAAACTCCCATTG
GAAGAAGAGGAATACGTCCAGAAGTTTAAAACGATGCTGATGGATGTGGTTCACTCCTGG
TGCAACGGATCCACTTTTGCACAAATCTCACAAATGACAGATGTCTTTGAAGGAAGCATA
ATAAGGTGCATGAGAAGACTTGAAGAGCTGCTGCGGGAAATGTGCCACGCTGCCAAAGCA
ATCGGGAACACACATCTTGAAAACAAGTTTTCTGAAGCGATCCAACTTATAAAAAGAGAC
ATCATTTTCGCTGCTAGCTTGTATTTATAA
| PIRSF |
Ski2-like (IPR016438) - T[1-929] 0.0 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[6-189] 2.6E-31 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[12-157] 2.8E-16 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[18-174] 23.166 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[21-159] 1.46E-46 - T[224-280] 1.46E-46 - T[320-414] 1.46E-46 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[245-449] 12.107 |
| CDD |
Helicase_C (IPR001650) - T[248-410] 3.5456E-13 |
| SMART |
Helicase_C (IPR001650) - T[311-400] 6.2E-16 |
| Pfam |
Helicase_C (IPR001650) - T[324-400] 4.9E-7 |
| Pfam |
rRNA_proc-arch_dom (IPR025696) - T[454-728] 3.0E-79 |
| SMART |
Ski2_C (IPR012961) - T[752-929] 5.3E-95 |
| Pfam |
Ski2_C (IPR012961) - T[755-924] 1.4E-58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MTREX_HUMAN | 70.108 % | 1382 | 0 |
| SKIV2_HUMAN | 36.618 % | 574 | 0 |