- Clone 'cibd069h03' >
- Transcript 'KH2012:KH.C10.256.v1...' >
- Transcript 'Cisavi.CG.ENS81.R48....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R48.1003367-1012890.16011.t
Possible name(s)
MTREX; SKIV2L
Gene model
Location
R48 [1,006,119 / 1,012,890]
Amino acid sequence
Length: 319
>Cisavi.CG.ENS81.R48.1003367-1012890.16011.p
MAVLRDSGDNAKSDFQRRGKQGGQRGKSGCVQIIELVMERKFLPAIVFSFSKKECEFYAN
QVLKLKFNSEAERKLVQEVFDNAMDSLSEEDRRLPQVEACLPFVLNGIGIHHGGLLPIIK
ETIEILFSEGLIKVLFATETFSMGVNMPAHTVIFTSIRKFDGKDFRWITGGEYIQMSGRA
GRRGMDENGLVIMMVDEKLSPNVGKALVKGSPDPLDSAFRLTYNMVLNLLRVEEINPEYM
LEKSFYQFQHYTAIPEMLANVTKLEKDYCGMKIKEEEESMNFSSQSSSLTGCSTTSPLHS
APHCCVVLYLMRSRKAFQS
Nucleotide sequence
Length: 1,568
>Cisavi.CG.ENS81.R48.1003367-1012890.16011.t
AATTTTAACACAGCGATGGCAGTGCTCAGGGATTCAGGGGATAATGCGAAAAGTGATTTC
CAACGACGGGGCAAGCAAGGGGGTCAACGTGGCAAAAGTGGCTGTGTGCAAATCATTGAA
CTTGTCATGGAGCGGAAGTTTCTACCAGCGATTGTCTTCTCGTTCAGCAAGAAGGAATGT
GAATTCTACGCAAATCAAGTCCTAAAACTCAAGTTTAACTCAGAGGCCGAGCGGAAATTG
GTGCAGGAAGTATTCGACAACGCAATGGATTCTCTCTCAGAGGAAGACCGACGGCTCCCT
CAGGTGGAAGCATGTCTGCCGTTCGTTTTAAACGGAATCGGAATTCACCACGGAGGTCTA
CTGCCCATTATCAAGGAAACAATTGAAATTCTTTTCTCCGAAGGGTTGATCAAGGTGTTA
TTTGCAACGGAGACCTTTTCGATGGGTGTGAACATGCCTGCACATACCGTCATATTCACC
AGCATTCGTAAATTTGATGGCAAAGATTTTAGATGGATTACAGGAGGGGAGTATATACAG
ATGAGTGGAAGAGCAGGGAGGAGAGGAATGGATGAGAACGGCCTTGTCATCATGATGGTC
GATGAAAAGTTATCCCCGAATGTTGGCAAAGCTCTTGTTAAGGGATCACCGGACCCCCTT
GACTCAGCGTTCAGACTAACATACAACATGGTGCTTAACCTACTGCGGGTGGAAGAGATT
AACCCAGAGTATATGCTCGAGAAATCCTTCTACCAGTTTCAACATTACACTGCCATACCG
GAGATGCTTGCAAATGTCACGAAATTGGAGAAAGATTACTGTGGGATGAAGATAAAGGAA
GAAGAAGAATCAATGAACTTCTCCTCACAGAGCTCATCTTTAACGGGGTGTTCAACAACC
TCACCCCTGCACAGTGCGCCGCATTGTTGTGTTGTTTTATATTTGATGAGAAGTCGAAAA
GCATTCCAAAGTTAAGCGAGGAACTGGCAAGTCCATTACGACAGTTGCATGAAATAGCAA
GAAAAATTGCCAAGGTGTCAAACGAGTCCAAACTCCCATTGGAAGAAGAGGAATACGTCC
AGAAGTTTAAAACGATGCTGATGGATGTGGTTCACTCCTGGTGCAACGGATCCACTTTTG
CACAAATCTCACAAATGACAGATGTCTTTGAAGGAAGCATAATAAGGTGCATGAGAAGAC
TTGAAGAGCTGCTGCGGGAAATGTGCCACGCTGCCAAAGCAATCGGGAACACACATCTTG
AAAACAAGTTTTCTGAAGCGATCCAACTTATAAAAAGAGACATCATTTTCGCTGCTAGCT
TGTATTTATAATAAATCAATAGCGTCAATTTTTTTAATTTTAAGGTGCACAGAAACGGGT
AAAATAAAAGGCAAATGGTTTGCCTACAAATTTAACAACCACTGCCTTCACTACAATGAT
GTTTTCGCAACAATTTTCAATAATGAAGTTGTCATTTGAGTGGTTTGAGGCCCAATTTCG
CCCTCAGTTCGTTCGCTTCCTGGATTTCCAAATCTTCATTATTTTTCGCCTTCTTGCTAT
GCTTGCTT
| ProSiteProfiles |
Helicase_C (IPR001650) - T[29-233] 12.107 |
| CDD |
Helicase_C (IPR001650) - T[32-194] 2.57191E-14 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[34-198] 4.79E-38 |
| SMART |
Helicase_C (IPR001650) - T[95-184] 6.2E-16 |
| Pfam |
Helicase_C (IPR001650) - T[108-184] 1.1E-7 |
| Pfam |
rRNA_proc-arch_dom (IPR025696) - T[238-279] 1.1E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MTREX_HUMAN | 63.072 % | 404 | 1.88E-133 |
| SKIV2_HUMAN | 41.797 % | 203 | 8.52E-59 |
| DDX6L_HUMAN | 40.323 % | 81.6 | 5.98E-17 |