Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R48.1159003-1171894.16941.t

Possible name(s)

AC113404.3; RAP1A; RAP1B

Gene model

Cisavi.CG.ENS81.R48.1159003-1171894

Location

R48 [1,159,002 / 1,171,300]

Sequences

Amino acid sequence

Length: 184

>Cisavi.CG.ENS81.R48.1159003-1171894.16941.p
MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEAENQQCMLEILDTAG
TEQFTAMRDLYMKNGQGFVLVYSITSQASFNDLTDLREQILRVKDTDDVPMILVGNKCDL
EDERIVTREQGEQLSRQWHCSFMETSARTKINVENIFFDLVKQINRKTPEPKKKKKKNSG
CNLL

Nucleotide sequence

Length: 790

>Cisavi.CG.ENS81.R48.1159003-1171894.16941.t
TTTAGGCTTAAAGTTGGAGATATGAGGGAATACAAGCTTGTGGTGCTTGGATCAGGTGGT
GTGGGGAAAAGTGCTTTGACAGTTCAATTCGTGCAAGGCATATTTGTGGAAAAATACGAC
CCAACGATTGAAGACAGCTATCGGAAGCAAGTTGAAGCAGAGAATCAACAATGTATGCTT
GAAATATTGGACACTGCTGGCACGGAGCAATTTACTGCAATGCGGGATCTGTACATGAAA
AATGGACAAGGTTTTGTCCTTGTATATAGCATCACCTCCCAGGCTTCTTTCAACGATCTA
ACTGATCTAAGGGAGCAAATTTTACGAGTAAAGGACACTGACGATGTGCCCATGATATTG
GTGGGAAACAAGTGTGATTTAGAAGATGAAAGAATTGTCACGAGGGAACAAGGTGAACAG
CTATCAAGGCAATGGCACTGTTCCTTCATGGAGACATCCGCAAGGACCAAAATCAATGTT
GAGAATATATTTTTCGACCTTGTCAAACAAATCAACCGGAAAACCCCGGAACCAAAGAAG
AAAAAGAAGAAGAACTCCGGGTGTAATCTTTTGTAACCCCCCCTCCCCCATTACATTTAC
CCCAGCCCGGTGTCCTTATAACGTGAGCTTATGATTGGTCGACTCGTTCTCTTTGTCCAC
CAATCACGTCTAATCGTCATGTGATCCACGGTTCCGCATCACAGAGCTAGCCAATTAGAA
CGAAGCGATCTTTTGCTTCTCTACTTTTACCTTTTTCCAAATTCTCTCCCATTGGTTAAA
GAGAAGTTAA

InterProScan

PANTHER	Small_GTPase_Ras (IPR020849) - T[1-184] 5.8E-105
TIGRFAM	Small_GTP-bd_dom (IPR005225) - T[1-157] 1.2E-32
ProSiteProfiles	Small_GTPase_Ras (IPR020849) - T[1-184] 45.633
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[2-164] 6.7E-54
Pfam	Small_GTPase (IPR001806) - T[5-165] 2.5E-58

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RAP1B_HUMAN	82.703 %	319	3.25E-113
RAP1A_HUMAN	84.706 %	304	2.17E-107
RP1BL_HUMAN	81.622 %	314	2.61E-111