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TRANSCRIPT CARD

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  1. Clone 'cima822429' > 
  2. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. EST 'FF737848.1' > 
  5. Transcript 'Cisavi.CG.ENS81.R48....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R48.1870472-1880304.18327.t

Possible name(s)

SALL1; SALL3

Gene model

Cisavi.CG.ENS81.R48.1870472-1880304

Location

R48 [1,870,947 / 1,880,304]

Sequences

Amino acid sequence

Length: 823

>Cisavi.CG.ENS81.R48.1870472-1880304.18327.p
MKEEVRPAVGFPVQVQDLNHQPQIYYEDDPQISGFPMERSPERVQQEQQQPFRPPSNDDT
YEEQPLCIEEDVERDQEFDQSSFQDGGNDGAEFQDSSPQQSPQRIEHTDSIRAPPPDTGE
DPNERRSSSDTRSSSDSRSSELQVIKEQVKMIQQQHAYQIQMIHYLHWQLNLLTQQRQQN
GIEQPAPPAAPPAQPVFNPITQLLSSNPGVLPPDPTRLAMAAMSNHSPNFAPSNVQHAFR
RASISPPVAELPRAPQRPSEPQREIPQRPDANEAMLRAINQHRQHQEEHKQPNPFIFSQQ
QPTSIPEQVSAILRAKNLIPNRPEQHQPFAERPRPPQPLERIQNNQKAQDGAEEPFVKNQ
CRTCRRILSCPSALKLHYRTHTGERPYQCDLCSRAFTTRGNLRTHYSSVHRRELPPASSS
GGSSVTKRGGSGKVDSHICPLCSSVFNDQIGLAQHMQMHAIVNKQQQQNLIMMKQKMLVT
PQAAHSPYEQNEKSKSDSVVDLSSRRSNPTSPVRGEHSIKEGAHRSPIKPELGDFPNGIA
EARHSYNALDLSNVSPGAVKPEPTENGLSDRYQQRSPVAKMASLKEGDTQRMVYPCGICF
RQLDSEEDLKDHLMTHDGASSCDSPSSCNGSISSIQEPKGEMGEDARGVKRPLEIDESFQ
APEAKRSMPRHWCNICKKQFSSASSLQIHTRTHTGEKPFICNVCLRSFTTKGNLKVHMGT
HVWGAGGSRKGRRVSMDNPLMSTWMKNSSNTEQVAPSARPREPEVAASPSAAAIYQVRSA
CPRAHESRSGRGQWSSQPPSKSGFGCKISAAAAATTTTSSARR

Nucleotide sequence

Length: 2,894

>Cisavi.CG.ENS81.R48.1870472-1880304.18327.t
TCAAAGAAAATAGCGGCGAGGCGCGAAATACGGGTGACAAGTTGTTTCCATACCCTCGAG
TTTTTGCATAAGCAACGTTGCTCGAGAAAGAAGAAGGGAAAAAGAGATGCTCTTCTTTGT
TTCTTTTTTTATGCGAAGTTAGGAGCAACGAACGCTTCATATGCAGGAGCTGGTGAGCAT
GTCTCACATTTGGTGTCAGATCTCGTTCTGTTTATTAGTCTGAACATATTTCGTTTACAA
GACTCCGTCAACGCTTTCTGTAAAGTACAGAATCGAGCCCAACTTTTGGTAGTACCCCGT
CGGAAAACATGAAAGAAGAGGTGAGGCCGGCAGTCGGCTTTCCGGTTCAAGTTCAAGACT
TAAATCATCAGCCACAGATATATTACGAAGATGACCCGCAGATAAGCGGATTTCCAATGG
AACGATCTCCTGAAAGAGTGCAGCAAGAGCAGCAACAGCCGTTCCGACCACCTTCGAATG
ATGACACTTACGAGGAGCAACCACTCTGCATTGAAGAGGATGTTGAAAGAGACCAGGAAT
TCGATCAATCATCCTTCCAGGATGGTGGAAACGATGGTGCAGAGTTTCAGGATTCGTCTC
CGCAGCAAAGTCCGCAAAGGATAGAACACACAGACTCTATACGGGCTCCTCCTCCGGATA
CCGGAGAGGATCCTAACGAAAGACGATCATCTTCGGACACGAGATCGTCGTCGGACAGCA
GATCCTCCGAACTACAAGTGATCAAAGAGCAAGTCAAGATGATTCAACAACAGCATGCAT
ATCAGATTCAGATGATTCACTATCTTCACTGGCAACTGAACCTTTTAACACAGCAGCGTC
AGCAGAATGGAATCGAGCAACCAGCTCCACCAGCAGCTCCACCTGCGCAACCGGTGTTCA
ACCCAATAACCCAACTTTTAAGTTCGAACCCAGGAGTATTGCCTCCAGATCCAACGAGAC
TTGCAATGGCTGCGATGTCAAACCACAGTCCCAATTTTGCTCCCAGTAACGTCCAACATG
CGTTCAGAAGAGCCTCCATTTCACCCCCAGTCGCTGAATTACCTCGCGCCCCACAACGAC
CCAGTGAACCCCAAAGAGAAATCCCACAAAGACCCGACGCGAATGAAGCTATGTTGAGAG
CAATAAACCAACACAGACAGCATCAAGAAGAGCATAAACAACCAAACCCGTTCATATTCT
CACAGCAACAACCAACGTCAATCCCCGAGCAAGTCTCTGCTATCCTCCGAGCCAAAAACC
TAATCCCCAATCGGCCAGAACAGCATCAACCATTTGCGGAACGCCCTCGACCACCCCAAC
CTTTGGAACGAATCCAAAATAACCAGAAAGCGCAGGATGGCGCAGAGGAACCATTCGTAA
AGAATCAGTGTCGCACCTGCAGGAGGATTCTGAGCTGTCCAAGCGCCTTGAAACTCCATT
ATAGAACTCATACAGGAGAAAGGCCTTATCAGTGCGATTTATGTTCTCGGGCCTTTACAA
CTCGAGGCAACCTGCGAACACACTACAGCAGTGTGCACCGTCGGGAGCTTCCTCCGGCGT
CCAGCTCCGGAGGATCATCCGTCACGAAAAGAGGAGGTTCGGGAAAAGTCGACAGCCACA
TTTGCCCGCTCTGCAGCTCCGTCTTCAACGACCAGATCGGCCTCGCTCAGCACATGCAGA
TGCACGCCATTGTAAACAAGCAGCAGCAGCAAAACTTGATCATGATGAAACAAAAAATGC
TGGTAACCCCACAGGCTGCACATTCACCGTACGAACAAAATGAAAAATCGAAGTCCGATT
CGGTGGTTGATCTATCGAGCCGACGTTCAAACCCCACATCCCCAGTTAGGGGTGAACATT
CGATCAAAGAGGGTGCCCATCGTTCCCCCATTAAACCTGAGTTGGGAGATTTTCCTAACG
GAATTGCAGAAGCCCGCCATAGTTACAATGCACTTGACTTGAGCAATGTTTCACCGGGCG
CTGTTAAACCCGAACCAACGGAAAATGGGCTTTCTGATAGATACCAGCAAAGATCTCCAG
TCGCTAAAATGGCTTCACTTAAAGAGGGAGACACCCAGCGGATGGTGTACCCATGTGGTA
TCTGCTTCCGACAACTTGACTCCGAGGAAGATTTAAAGGATCATTTGATGACCCATGATG
GTGCATCATCTTGTGACAGTCCGTCCTCCTGCAACGGATCAATTTCTAGCATCCAGGAGC
CGAAGGGCGAGATGGGTGAAGATGCACGAGGAGTCAAACGGCCGTTAGAAATTGACGAAT
CGTTTCAAGCCCCCGAAGCAAAACGGAGCATGCCTCGCCATTGGTGTAATATTTGCAAGA
AGCAGTTCTCATCCGCTAGTTCTTTGCAGATACACACGCGCACTCACACCGGCGAGAAGC
CGTTCATTTGCAATGTCTGTCTCCGTTCGTTCACCACCAAGGGGAACCTTAAAGTCCACA
TGGGAACTCACGTATGGGGAGCCGGGGGTTCGCGCAAAGGGCGAAGAGTCTCGATGGACA
ATCCGTTGATGTCAACCTGGATGAAAAACTCTTCTAACACCGAGCAAGTGGCTCCGAGCG
CACGACCAAGAGAACCAGAAGTTGCAGCAAGCCCTTCGGCTGCAGCCATATACCAGGTAC
GCAGCGCTTGCCCAAGGGCTCATGAATCGAGGTCAGGCAGAGGGCAGTGGAGTTCCCAGC
CACCTTCTAAATCAGGCTTTGGCTGCAAGATATCTGCAGCAGCAGCAGCAACAACAACAA
CTTCCAGTGCTCGGCGGTAATCCAGCGGCAACTGAAGGATCCCCCGAAGCCAGTCTTTCA
TCCGACGGAGAACAGGAGCAAGGGGAAACCCCTGGACAGATTTCGGCAGCTGCGCACGAG
TGGCTGTGGAAAGC

InterProScan

SMART
Znf_C2H2_type (IPR013087) - T[359-381] 6.3 - T[387-410] 3.4E-4 - T[437-459] 0.0015 - T[594-616] 0.31 - T[671-693] 0.16 - T[699-721] 9.8E-4
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[359-386] 12.799 - T[387-415] 13.339 - T[437-460] 8.663 - T[594-621] 9.349 - T[671-698] 15.168 - T[699-721] 10.263
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[361-381] . - T[389-410] . - T[439-459] . - T[596-616] . - T[673-693] . - T[701-721] .
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[370-415] 3.83E-13 - T[437-459] 9.01E-6 - T[589-616] 9.01E-6 - T[671-721] 7.34E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZN33A_HUMAN 26.603 % 110 9.57E-25
SALL1_HUMAN 41.143 % 123 1.08E-28
SALL3_HUMAN 36.413 % 115 3.48E-26